RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-246ENST00000557030 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
ATXN3-246ENST00000557030 ESPNB1AK53 854 aa9.12□□□□□ -0.95
ATXN3-246ENST00000557030 ZIC2O95409 532 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-246ENST00000557030 BMP1P13497 986 aa9.12□□□□□ -0.95
ATXN3-246ENST00000557030 CCDC116Q8IYX3 515 aa9.12□□□□□ -0.95
ATXN3-246ENST00000557030 NDUFB9Q9Y6M9 179 aa9.12□□□□□ -0.95
ATXN3-246ENST00000557030 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
ATXN3-246ENST00000557030 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
ATXN3-246ENST00000557030 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-246ENST00000557030 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
ATXN3-246ENST00000557030 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-246ENST00000557030 PPP1R26Q5T8A7 1209 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-246ENST00000557030 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
ATXN3-246ENST00000557030 EMILIN1Q9Y6C2 1016 aa9.1□□□□□ -0.95
ATXN3-246ENST00000557030 NR1H3Q13133 447 aa9.09□□□□□ -0.95
ATXN3-246ENST00000557030 MEIOBQ8N635 442 aa9.09□□□□□ -0.95
ATXN3-246ENST00000557030 KIFC2Q96AC6 838 aa9.09□□□□□ -0.95
ATXN3-246ENST00000557030 APBB1O00213 710 aa9.08□□□□□ -0.96
ATXN3-246ENST00000557030 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
ATXN3-246ENST00000557030 Q6ZVU0 165 aa9.08□□□□□ -0.96
ATXN3-246ENST00000557030 ZFP42Q96MM3 310 aa9.08□□□□□ -0.96
ATXN3-246ENST00000557030 IRF5Q13568 498 aa9.07□□□□□ -0.96
ATXN3-246ENST00000557030 MCM6Q14566 821 aa9.07□□□□□ -0.96
ATXN3-246ENST00000557030 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-246ENST00000557030 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
ATXN3-246ENST00000557030 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
ATXN3-246ENST00000557030 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
ATXN3-246ENST00000557030 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
ATXN3-246ENST00000557030 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
ATXN3-246ENST00000557030 PGPEP1Q9NXJ5 209 aa9.04□□□□□ -0.96
ATXN3-246ENST00000557030 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
ATXN3-246ENST00000557030 LILRA1O75019 489 aa9.03□□□□□ -0.96
ATXN3-246ENST00000557030 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-246ENST00000557030 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
ATXN3-246ENST00000557030 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
ATXN3-246ENST00000557030 GIGYF1O75420 1035 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-246ENST00000557030 CBLBQ13191 982 aa9.02□□□□□ -0.97
ATXN3-246ENST00000557030 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
ATXN3-246ENST00000557030 SCARF1Q14162 830 aa9.01□□□□□ -0.97
ATXN3-246ENST00000557030 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-246ENST00000557030 ZNF784Q8NCA9 323 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-246ENST00000557030 PCDHB9Q9Y5E1 797 aa9.01□□□□□ -0.97
ATXN3-246ENST00000557030 ADD1P35611 737 aaKnown RBP9□□□□□ -0.97
ATXN3-246ENST00000557030 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
ATXN3-246ENST00000557030 CCDC125Q86Z20 511 aa9□□□□□ -0.97
ATXN3-246ENST00000557030 TSEN34Q9BSV6 310 aaKnown RBP9□□□□□ -0.97
ATXN3-246ENST00000557030 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
ATXN3-246ENST00000557030 ZNF592Q92610 1267 aa8.99□□□□□ -0.97
ATXN3-246ENST00000557030 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-246ENST00000557030 SPINT1O43278 529 aa8.98□□□□□ -0.97
ATXN3-246ENST00000557030 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
ATXN3-246ENST00000557030 TREML4Q6UXN2 200 aa8.98□□□□□ -0.97
ATXN3-246ENST00000557030 PRM3Q9NNZ6 103 aa8.98□□□□□ -0.97
ATXN3-246ENST00000557030 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
ATXN3-246ENST00000557030 ZNF330Q9Y3S2 320 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-246ENST00000557030 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
ATXN3-246ENST00000557030 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.98
ATXN3-246ENST00000557030 BMP2P12643 396 aa8.96□□□□□ -0.98
ATXN3-246ENST00000557030 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
ATXN3-246ENST00000557030 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
ATXN3-246ENST00000557030 UPP2O95045 317 aa8.95□□□□□ -0.98
ATXN3-246ENST00000557030 ADH1AP07327 375 aa8.95□□□□□ -0.98
ATXN3-246ENST00000557030 RAB15P59190 212 aa8.95□□□□□ -0.98
ATXN3-246ENST00000557030 ERVK-9P63128 1117 aa8.95□□□□□ -0.98
ATXN3-246ENST00000557030 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
ATXN3-246ENST00000557030 SOBPA7XYQ1 873 aa8.94□□□□□ -0.98
ATXN3-246ENST00000557030 FLIIQ13045 1269 aa8.94□□□□□ -0.98
ATXN3-246ENST00000557030 NPAS3Q8IXF0 933 aa8.94□□□□□ -0.98
ATXN3-246ENST00000557030 AGBL1Q96MI9 1066 aa8.94□□□□□ -0.98
ATXN3-246ENST00000557030 NXF1Q9UBU9 619 aaKnown RBP8.94□□□□□ -0.98
ATXN3-246ENST00000557030 DNMT3LQ9UJW3 386 aa8.94□□□□□ -0.98
ATXN3-246ENST00000557030 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
ATXN3-246ENST00000557030 ABL2P42684 1182 aa8.93□□□□□ -0.98
ATXN3-246ENST00000557030 VAC14Q08AM6 782 aa8.93□□□□□ -0.98
ATXN3-246ENST00000557030 WASHC4Q2M389 1173 aa8.93□□□□□ -0.98
ATXN3-246ENST00000557030 POM121Q96HA1 1249 aa8.93□□□□□ -0.98
ATXN3-246ENST00000557030 TRAK2O60296 914 aa8.92□□□□□ -0.98
ATXN3-246ENST00000557030 SCTRP47872 440 aa8.92□□□□□ -0.98
ATXN3-246ENST00000557030 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
ATXN3-246ENST00000557030 CCDC85AQ96PX6 553 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-246ENST00000557030 CYLDQ9NQC7 956 aa8.92□□□□□ -0.98
ATXN3-246ENST00000557030 TTLL8A6PVC2 850 aa8.91□□□□□ -0.98
ATXN3-246ENST00000557030 WFS1O76024 890 aa8.91□□□□□ -0.98
ATXN3-246ENST00000557030 PTGIRP43119 386 aa8.91□□□□□ -0.98
ATXN3-246ENST00000557030 RELBQ01201 579 aa8.91□□□□□ -0.98
ATXN3-246ENST00000557030 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
ATXN3-246ENST00000557030 H3BM21 787 aa8.9□□□□□ -0.98
ATXN3-246ENST00000557030 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-246ENST00000557030 MAN1A2O60476 641 aa8.89□□□□□ -0.99
ATXN3-246ENST00000557030 TSGA10IPQ3SY00 556 aa8.89□□□□□ -0.99
ATXN3-246ENST00000557030 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
ATXN3-246ENST00000557030 INSM2Q96T92 566 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-246ENST00000557030 CDCA7Q9BWT1 371 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-246ENST00000557030 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
ATXN3-246ENST00000557030 SOX11P35716 441 aa8.88□□□□□ -0.99
ATXN3-246ENST00000557030 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-246ENST00000557030 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
ATXN3-246ENST00000557030 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-246ENST00000557030 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 262.3 ms