RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 NFAT5O94916 1531 aa26.24■■□□□ 1.79
VIPAS39-209ENST00000556909 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
VIPAS39-209ENST00000556909 TOM1L2Q6ZVM7 507 aa26.23■■□□□ 1.79
VIPAS39-209ENST00000556909 WDR17Q8IZU2 1322 aa26.22■■□□□ 1.79
VIPAS39-209ENST00000556909 C11orf95C9JLR9 678 aaPredicted RBP26.22■■□□□ 1.79
VIPAS39-209ENST00000556909 AXIN2Q9Y2T1 843 aa26.22■■□□□ 1.79
VIPAS39-209ENST00000556909 ZNF692Q9BU19 519 aaPredicted RBP26.21■■□□□ 1.79
VIPAS39-209ENST00000556909 USP54Q70EL1 1684 aa26.21■■□□□ 1.79
VIPAS39-209ENST00000556909 TTC21AQ8NDW8 1320 aa26.2■■□□□ 1.79
VIPAS39-209ENST00000556909 ARHGEF25Q86VW2 580 aa26.2■■□□□ 1.78
VIPAS39-209ENST00000556909 ABCC6O95255 1503 aa26.19■■□□□ 1.78
VIPAS39-209ENST00000556909 DDB1Q16531 1140 aa26.19■■□□□ 1.78
VIPAS39-209ENST00000556909 NBPF14Q5TI25 921 aa26.19■■□□□ 1.78
VIPAS39-209ENST00000556909 KCNH5Q8NCM2 988 aa26.19■■□□□ 1.78
VIPAS39-209ENST00000556909 KTN1Q86UP2 1357 aaKnown RBP26.18■■□□□ 1.78
VIPAS39-209ENST00000556909 SBNO2Q9Y2G9 1366 aa26.17■■□□□ 1.78
VIPAS39-209ENST00000556909 SOX12O15370 315 aa26.16■■□□□ 1.78
VIPAS39-209ENST00000556909 LTN1O94822 1766 aa26.15■■□□□ 1.78
VIPAS39-209ENST00000556909 BCL9O00512 1426 aa26.14■■□□□ 1.77
VIPAS39-209ENST00000556909 CDCA7Q9BWT1 371 aaPredicted RBP26.13■■□□□ 1.77
VIPAS39-209ENST00000556909 CASZ1Q86V15 1759 aa26.12■■□□□ 1.77
VIPAS39-209ENST00000556909 CD163L1Q9NR16 1453 aa26.12■■□□□ 1.77
VIPAS39-209ENST00000556909 MARCH10Q8NA82 808 aaPredicted RBP26.12■■□□□ 1.77
VIPAS39-209ENST00000556909 CARD10Q9BWT7 1032 aa26.12■■□□□ 1.77
VIPAS39-209ENST00000556909 PLSCR1O15162 318 aa26.11■■□□□ 1.77
VIPAS39-209ENST00000556909 CSB-PGBD3P0DP91 1061 aa26.11■■□□□ 1.77
VIPAS39-209ENST00000556909 PTF1AQ7RTS3 328 aa26.11■■□□□ 1.77
VIPAS39-209ENST00000556909 BCL11BQ9C0K0 894 aaPredicted RBP26.11■■□□□ 1.77
VIPAS39-209ENST00000556909 USP31Q70CQ4 1352 aa26.09■■□□□ 1.77
VIPAS39-209ENST00000556909 CCDC7Q96M83 1385 aa26.08■■□□□ 1.77
VIPAS39-209ENST00000556909 TNS2Q63HR2 1409 aa26.08■■□□□ 1.77
VIPAS39-209ENST00000556909 NHSQ6T4R5 1651 aa26.06■■□□□ 1.76
VIPAS39-209ENST00000556909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.06■■□□□ 1.76
VIPAS39-209ENST00000556909 CARD11Q9BXL7 1154 aa26.06■■□□□ 1.76
VIPAS39-209ENST00000556909 ANO8Q9HCE9 1232 aaPredicted RBP26.06■■□□□ 1.76
VIPAS39-209ENST00000556909 SPON1Q9HCB6 807 aa26.05■■□□□ 1.76
VIPAS39-209ENST00000556909 KCNQ2O43526 872 aa26.04■■□□□ 1.76
VIPAS39-209ENST00000556909 NME9Q86XW9 330 aa26.03■■□□□ 1.76
VIPAS39-209ENST00000556909 EXOC5O00471 708 aa26.01■■□□□ 1.75
VIPAS39-209ENST00000556909 ERBB3P21860 1342 aa26.01■■□□□ 1.75
VIPAS39-209ENST00000556909 EDC4Q6P2E9 1401 aaKnown RBP26.01■■□□□ 1.75
VIPAS39-209ENST00000556909 PROM2Q8N271 834 aa26.01■■□□□ 1.75
VIPAS39-209ENST00000556909 PPP1R1BQ9UD71 204 aaPredicted RBP26.01■■□□□ 1.75
VIPAS39-209ENST00000556909 TMC1Q8TDI8 760 aa26■■□□□ 1.75
VIPAS39-209ENST00000556909 NINLQ9Y2I6 1382 aa25.99■■□□□ 1.75
VIPAS39-209ENST00000556909 A0A1W2PP64 1363 aa25.98■■□□□ 1.75
VIPAS39-209ENST00000556909 TONSLQ96HA7 1378 aa25.98■■□□□ 1.75
VIPAS39-209ENST00000556909 HDGFL2Q7Z4V5 671 aaPredicted RBP25.98■■□□□ 1.75
VIPAS39-209ENST00000556909 SLC12A5Q9H2X9 1139 aa25.98■■□□□ 1.75
VIPAS39-209ENST00000556909 BTAF1O14981 1849 aa25.98■■□□□ 1.75
VIPAS39-209ENST00000556909 MYOM1P52179 1685 aa25.97■■□□□ 1.75
VIPAS39-209ENST00000556909 FAM208AQ9UK61 1670 aaKnown RBP25.97■■□□□ 1.75
VIPAS39-209ENST00000556909 PDGFDQ9GZP0 370 aaPredicted RBP25.96■■□□□ 1.75
VIPAS39-209ENST00000556909 TXNRD1Q16881 649 aa25.95■■□□□ 1.74
VIPAS39-209ENST00000556909 NLRP2Q9NX02 1062 aa25.95■■□□□ 1.74
VIPAS39-209ENST00000556909 PAPPAQ13219 1627 aa25.94■■□□□ 1.74
VIPAS39-209ENST00000556909 KAT6BQ8WYB5 2073 aa25.94■■□□□ 1.74
VIPAS39-209ENST00000556909 TERF2IPQ9NYB0 399 aa25.93■■□□□ 1.74
VIPAS39-209ENST00000556909 IL2RBP14784 551 aa25.92■■□□□ 1.74
VIPAS39-209ENST00000556909 ANKRD24Q8TF21 1146 aa25.92■■□□□ 1.74
VIPAS39-209ENST00000556909 PUS7Q96PZ0 661 aaKnown RBP25.91■■□□□ 1.74
VIPAS39-209ENST00000556909 ZBTB7AO95365 584 aa25.9■■□□□ 1.74
VIPAS39-209ENST00000556909 ACSBG1Q96GR2 724 aa25.9■■□□□ 1.74
VIPAS39-209ENST00000556909 STK32BQ9NY57 414 aa25.9■■□□□ 1.74
VIPAS39-209ENST00000556909 SLC15A2Q16348 729 aa25.88■■□□□ 1.73
VIPAS39-209ENST00000556909 RGPD2P0DJD1 1756 aa25.87■■□□□ 1.73
VIPAS39-209ENST00000556909 YY1P25490 414 aa25.86■■□□□ 1.73
VIPAS39-209ENST00000556909 PTGER2P43116 358 aa25.86■■□□□ 1.73
VIPAS39-209ENST00000556909 TESK2Q96S53 571 aa25.86■■□□□ 1.73
VIPAS39-209ENST00000556909 IP6K1Q92551 441 aa25.84■■□□□ 1.73
VIPAS39-209ENST00000556909 SHANK3Q9BYB0 1731 aa25.84■■□□□ 1.73
VIPAS39-209ENST00000556909 ATF5Q9Y2D1 282 aaPredicted RBP25.83■■□□□ 1.73
VIPAS39-209ENST00000556909 DOT1LQ8TEK3 1739 aa25.83■■□□□ 1.72
VIPAS39-209ENST00000556909 ST20-MTHFSA0A0A6YYL1 179 aa25.82■■□□□ 1.72
VIPAS39-209ENST00000556909 DCAF8L1A6NGE4 600 aa25.82■■□□□ 1.72
VIPAS39-209ENST00000556909 QSER1Q2KHR3 1735 aa25.81■■□□□ 1.72
VIPAS39-209ENST00000556909 LTV1Q96GA3 475 aaPredicted RBP25.79■■□□□ 1.72
VIPAS39-209ENST00000556909 COG3Q96JB2 828 aa25.79■■□□□ 1.72
VIPAS39-209ENST00000556909 MTFR1LQ9H019 292 aa25.79■■□□□ 1.72
VIPAS39-209ENST00000556909 MAP3K19Q56UN5 1328 aa25.79■■□□□ 1.72
VIPAS39-209ENST00000556909 TUBGCP6Q96RT7 1819 aa25.78■■□□□ 1.72
VIPAS39-209ENST00000556909 ANKRD36BQ8N2N9 1353 aa25.78■■□□□ 1.72
VIPAS39-209ENST00000556909 UTRNP46939 3433 aa25.77■■□□□ 1.72
VIPAS39-209ENST00000556909 SGIP1Q9BQI5 828 aa25.77■■□□□ 1.72
VIPAS39-209ENST00000556909 KIF20BQ96Q89 1820 aa25.77■■□□□ 1.72
VIPAS39-209ENST00000556909 HOXC9P31274 260 aa25.76■■□□□ 1.71
VIPAS39-209ENST00000556909 LY75O60449 1722 aa25.76■■□□□ 1.71
VIPAS39-209ENST00000556909 ZNF827Q17R98 1081 aa25.75■■□□□ 1.71
VIPAS39-209ENST00000556909 MEGF6O75095 1541 aa25.74■■□□□ 1.71
VIPAS39-209ENST00000556909 SLC24A1O60721 1099 aa25.74■■□□□ 1.71
VIPAS39-209ENST00000556909 DDX54Q8TDD1 881 aaKnown RBP25.74■■□□□ 1.71
VIPAS39-209ENST00000556909 FHDC1Q9C0D6 1143 aaPredicted RBP25.74■■□□□ 1.71
VIPAS39-209ENST00000556909 LRRC4BQ9NT99 713 aa25.74■■□□□ 1.71
VIPAS39-209ENST00000556909 RTL1A6NKG5 1358 aa25.73■■□□□ 1.71
VIPAS39-209ENST00000556909 FBLN1P23142 703 aa25.73■■□□□ 1.71
VIPAS39-209ENST00000556909 COL24A1Q17RW2 1714 aa25.72■■□□□ 1.71
VIPAS39-209ENST00000556909 AMPHP49418 695 aa25.72■■□□□ 1.71
VIPAS39-209ENST00000556909 CHD4Q14839 1912 aa25.71■■□□□ 1.71
VIPAS39-209ENST00000556909 SYT17Q9BSW7 474 aa25.71■■□□□ 1.71
VIPAS39-209ENST00000556909 USP47Q96K76 1375 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms