RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
GPHN-214ENST00000556633 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
GPHN-214ENST00000556633 GIGYF1O75420 1035 aaPredicted RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 CD2BP2O95400 341 aaKnown RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 VARSP26640 1264 aaKnown RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 NBPF20Q3BBV1 942 aa6.95□□□□□ -1.3
GPHN-214ENST00000556633 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
GPHN-214ENST00000556633 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 NCOA4Q13772 614 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 TSGA10IPQ3SY00 556 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 IFFO2Q5TF58 517 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 LIAT1Q6ZQX7 453 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 EHBP1Q8NDI1 1231 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 CHIC2Q9UKJ5 165 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 ATG7O95352 703 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 MAP7D1Q3KQU3 841 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 RC3H1Q5TC82 1133 aaKnown RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 DOLKQ9UPQ8 538 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 ESPNB1AK53 854 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
GPHN-214ENST00000556633 RAB15P59190 212 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 ARID5BQ14865 1188 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 EML3Q32P44 896 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 TRAF7Q6Q0C0 670 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 KCTD15Q96SI1 283 aaPredicted RBP6.92□□□□□ -1.3
GPHN-214ENST00000556633 TRAIPQ9BWF2 469 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
GPHN-214ENST00000556633 SLC19A1P41440 591 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 PDE4CQ08493 712 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 OXLD1Q5BKU9 147 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 VASH1Q7L8A9 365 aaPredicted RBP6.91□□□□□ -1.3
GPHN-214ENST00000556633 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 MAP4K5Q9Y4K4 846 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 RASA1P20936 1047 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
GPHN-214ENST00000556633 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 FAM196BA6NMK8 535 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L21D6R901 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
GPHN-214ENST00000556633 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
GPHN-214ENST00000556633 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
GPHN-214ENST00000556633 TLL2Q9Y6L7 1015 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 A0A0G2JS52 829 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 WNT7AO00755 349 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 FSHRP23945 695 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
GPHN-214ENST00000556633 TRIM50Q86XT4 487 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 CCDC125Q86Z20 511 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 OGFOD1Q8N543 542 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 CDK15Q96Q40 435 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 ZMIZ1Q9ULJ6 1067 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 NOVA2Q9UNW9 492 aaKnown RBP6.88□□□□□ -1.31
GPHN-214ENST00000556633 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 SIAH2O43255 324 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 ATP1A2P50993 1020 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 CLDN10P78369 228 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
GPHN-214ENST00000556633 PTK7Q13308 1070 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 SPRYD7Q5W111 196 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 STK32AQ8WU08 396 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 ZNF594Q96JF6 807 aaPredicted RBP6.87□□□□□ -1.31
GPHN-214ENST00000556633 MRGPRX2Q96LB1 330 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 GRM5P41594 1212 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 GTF2IP78347 998 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 USP4Q13107 963 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 ZNF697Q5TEC3 545 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 TMEM164Q5U3C3 297 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 MPNDQ8N594 471 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 SIRT1Q96EB6 747 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
GPHN-214ENST00000556633 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 ADH1CP00326 375 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
GPHN-214ENST00000556633 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 KCTD17Q8N5Z5 321 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 ZBTB7CA1YPR0 619 aa6.84□□□□□ -1.31
GPHN-214ENST00000556633 SCTRP47872 440 aa6.84□□□□□ -1.31
GPHN-214ENST00000556633 PSME1Q06323 249 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms