RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 NFAT5O94916 1531 aa23.51■■□□□ 1.35
PSEN1-217ENST00000556533 CSB-PGBD3P0DP91 1061 aa23.51■■□□□ 1.35
PSEN1-217ENST00000556533 SEPT12Q8IYM1 358 aa23.51■■□□□ 1.35
PSEN1-217ENST00000556533 SPATA31A1Q5TZJ5 1347 aa23.5■■□□□ 1.35
PSEN1-217ENST00000556533 GLI3P10071 1580 aa23.49■■□□□ 1.35
PSEN1-217ENST00000556533 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
PSEN1-217ENST00000556533 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
PSEN1-217ENST00000556533 WASHC2AQ641Q2 1341 aa23.48■■□□□ 1.35
PSEN1-217ENST00000556533 AMPHP49418 695 aa23.47■■□□□ 1.35
PSEN1-217ENST00000556533 RRS1Q15050 365 aaKnown RBP23.47■■□□□ 1.35
PSEN1-217ENST00000556533 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
PSEN1-217ENST00000556533 COL5A2P05997 1499 aaPredicted RBP23.47■■□□□ 1.35
PSEN1-217ENST00000556533 ONECUT3O60422 494 aaPredicted RBP23.46■■□□□ 1.35
PSEN1-217ENST00000556533 KNSTRNQ9Y448 316 aa23.46■■□□□ 1.35
PSEN1-217ENST00000556533 LMO7Q8WWI1 1683 aa23.45■■□□□ 1.34
PSEN1-217ENST00000556533 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
PSEN1-217ENST00000556533 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
PSEN1-217ENST00000556533 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
PSEN1-217ENST00000556533 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
PSEN1-217ENST00000556533 TNNT2P45379 298 aaPredicted RBP23.44■■□□□ 1.34
PSEN1-217ENST00000556533 IP6K1Q92551 441 aa23.44■■□□□ 1.34
PSEN1-217ENST00000556533 WDR17Q8IZU2 1322 aa23.43■■□□□ 1.34
PSEN1-217ENST00000556533 ANKRD24Q8TF21 1146 aa23.43■■□□□ 1.34
PSEN1-217ENST00000556533 USP54Q70EL1 1684 aa23.43■■□□□ 1.34
PSEN1-217ENST00000556533 NLRP2Q9NX02 1062 aa23.42■■□□□ 1.34
PSEN1-217ENST00000556533 CRB1P82279 1406 aa23.42■■□□□ 1.34
PSEN1-217ENST00000556533 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
PSEN1-217ENST00000556533 KRT27Q7Z3Y8 459 aa23.41■■□□□ 1.34
PSEN1-217ENST00000556533 HOXC9P31274 260 aa23.4■■□□□ 1.34
PSEN1-217ENST00000556533 COL18A1P39060 1754 aa23.4■■□□□ 1.34
PSEN1-217ENST00000556533 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
PSEN1-217ENST00000556533 BARGINQ6ZT62 677 aa23.39■■□□□ 1.33
PSEN1-217ENST00000556533 THRAP3Q9Y2W1 955 aaKnown RBP23.39■■□□□ 1.33
PSEN1-217ENST00000556533 MORC1Q86VD1 984 aa23.38■■□□□ 1.33
PSEN1-217ENST00000556533 CARD10Q9BWT7 1032 aa23.38■■□□□ 1.33
PSEN1-217ENST00000556533 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.33
PSEN1-217ENST00000556533 EMILIN1Q9Y6C2 1016 aa23.37■■□□□ 1.33
PSEN1-217ENST00000556533 KIF20BQ96Q89 1820 aa23.37■■□□□ 1.33
PSEN1-217ENST00000556533 ERBB3P21860 1342 aa23.36■■□□□ 1.33
PSEN1-217ENST00000556533 FAM182BQ5T319 152 aa23.36■■□□□ 1.33
PSEN1-217ENST00000556533 BLMP54132 1417 aaPredicted RBP23.34■■□□□ 1.33
PSEN1-217ENST00000556533 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
PSEN1-217ENST00000556533 HSP90AB2PQ58FF8 381 aa23.34■■□□□ 1.33
PSEN1-217ENST00000556533 ABCC6O95255 1503 aa23.33■■□□□ 1.33
PSEN1-217ENST00000556533 LTN1O94822 1766 aa23.33■■□□□ 1.33
PSEN1-217ENST00000556533 PER1O15534 1290 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-217ENST00000556533 AMER1Q5JTC6 1135 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-217ENST00000556533 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
PSEN1-217ENST00000556533 NSD2O96028 1365 aa23.32■■□□□ 1.32
PSEN1-217ENST00000556533 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
PSEN1-217ENST00000556533 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
PSEN1-217ENST00000556533 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
PSEN1-217ENST00000556533 FLT4P35916 1363 aa23.29■■□□□ 1.32
PSEN1-217ENST00000556533 DDB1Q16531 1140 aa23.29■■□□□ 1.32
PSEN1-217ENST00000556533 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
PSEN1-217ENST00000556533 INSRP06213 1382 aa23.27■■□□□ 1.32
PSEN1-217ENST00000556533 THSD7AQ9UPZ6 1657 aa23.26■■□□□ 1.31
PSEN1-217ENST00000556533 NBPF6Q5VWK0 638 aa23.26■■□□□ 1.31
PSEN1-217ENST00000556533 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
PSEN1-217ENST00000556533 NBPF4Q96M43 638 aa23.26■■□□□ 1.31
PSEN1-217ENST00000556533 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
PSEN1-217ENST00000556533 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
PSEN1-217ENST00000556533 BRWD3Q6RI45 1802 aa23.25■■□□□ 1.31
PSEN1-217ENST00000556533 EXOC5O00471 708 aa23.25■■□□□ 1.31
PSEN1-217ENST00000556533 IL2RBP14784 551 aa23.25■■□□□ 1.31
PSEN1-217ENST00000556533 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
PSEN1-217ENST00000556533 SF3B2Q13435 895 aaKnown RBP23.22■■□□□ 1.31
PSEN1-217ENST00000556533 PEAK1Q9H792 1746 aa23.22■■□□□ 1.31
PSEN1-217ENST00000556533 CCDC125Q86Z20 511 aa23.21■■□□□ 1.31
PSEN1-217ENST00000556533 DISP2A7MBM2 1401 aa23.19■■□□□ 1.3
PSEN1-217ENST00000556533 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
PSEN1-217ENST00000556533 MARCH10Q8NA82 808 aaPredicted RBP23.19■■□□□ 1.3
PSEN1-217ENST00000556533 ANKRD26Q9UPS8 1709 aa23.19■■□□□ 1.3
PSEN1-217ENST00000556533 TRIM37O94972 964 aa23.18■■□□□ 1.3
PSEN1-217ENST00000556533 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
PSEN1-217ENST00000556533 MTHFSP49914 203 aa23.17■■□□□ 1.3
PSEN1-217ENST00000556533 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
PSEN1-217ENST00000556533 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
PSEN1-217ENST00000556533 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
PSEN1-217ENST00000556533 EYA1Q99502 592 aa23.15■■□□□ 1.3
PSEN1-217ENST00000556533 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
PSEN1-217ENST00000556533 DEFB132Q7Z7B7 95 aa23.14■■□□□ 1.29
PSEN1-217ENST00000556533 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
PSEN1-217ENST00000556533 MAP2P11137 1827 aaKnown RBP23.13■■□□□ 1.29
PSEN1-217ENST00000556533 EP400Q96L91 3159 aa23.13■■□□□ 1.29
PSEN1-217ENST00000556533 LRRC37A3O60309 1634 aa23.12■■□□□ 1.29
PSEN1-217ENST00000556533 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
PSEN1-217ENST00000556533 ZCRB1Q8TBF4 217 aaKnown RBP23.12■■□□□ 1.29
PSEN1-217ENST00000556533 TNS2Q63HR2 1409 aa23.11■■□□□ 1.29
PSEN1-217ENST00000556533 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
PSEN1-217ENST00000556533 APBA3O96018 575 aa23.1■■□□□ 1.29
PSEN1-217ENST00000556533 BAG6P46379 1132 aa23.1■■□□□ 1.29
PSEN1-217ENST00000556533 MEGF6O75095 1541 aa23.09■■□□□ 1.29
PSEN1-217ENST00000556533 ACSBG1Q96GR2 724 aa23.08■■□□□ 1.29
PSEN1-217ENST00000556533 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
PSEN1-217ENST00000556533 IL13P35225 146 aa23.07■■□□□ 1.28
PSEN1-217ENST00000556533 EN1Q05925 392 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-217ENST00000556533 WNK3Q9BYP7 1800 aa23.07■■□□□ 1.28
PSEN1-217ENST00000556533 DIAPH1O60610 1272 aaKnown RBP23.05■■□□□ 1.28
PSEN1-217ENST00000556533 PPP2R1AP30153 589 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms