RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 SNRPBP14678 240 aaKnown RBP6.4□□□□□ -1.38
TGFB3-205ENST00000556507 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.38
TGFB3-205ENST00000556507 KLF16Q9BXK1 252 aaPredicted RBP6.4□□□□□ -1.38
TGFB3-205ENST00000556507 GPSM3Q9Y4H4 160 aa6.4□□□□□ -1.38
TGFB3-205ENST00000556507 ITPKCQ96DU7 683 aa6.39□□□□□ -1.39
TGFB3-205ENST00000556507 SLC10A4Q96EP9 437 aa6.39□□□□□ -1.39
TGFB3-205ENST00000556507 TRIM34Q9BYJ4 488 aa6.39□□□□□ -1.39
TGFB3-205ENST00000556507 CDV3Q9UKY7 258 aaKnown RBP6.39□□□□□ -1.39
TGFB3-205ENST00000556507 CECR2Q9BXF3 1484 aa6.39□□□□□ -1.39
TGFB3-205ENST00000556507 LOC105371045A0A1W2PR82 267 aa6.38□□□□□ -1.39
TGFB3-205ENST00000556507 SCARF1Q14162 830 aa6.38□□□□□ -1.39
TGFB3-205ENST00000556507 MRPL14Q6P1L8 145 aaKnown RBP6.38□□□□□ -1.39
TGFB3-205ENST00000556507 CCDC116Q8IYX3 515 aa6.38□□□□□ -1.39
TGFB3-205ENST00000556507 ADAM32Q8TC27 787 aa6.38□□□□□ -1.39
TGFB3-205ENST00000556507 OCSTAMPQ9BR26 566 aa6.38□□□□□ -1.39
TGFB3-205ENST00000556507 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
TGFB3-205ENST00000556507 MROH2BQ7Z745 1585 aa6.37□□□□□ -1.39
TGFB3-205ENST00000556507 BANK1Q8NDB2 785 aa6.37□□□□□ -1.39
TGFB3-205ENST00000556507 ZFP42Q96MM3 310 aa6.37□□□□□ -1.39
TGFB3-205ENST00000556507 KCTD15Q96SI1 283 aaPredicted RBP6.37□□□□□ -1.39
TGFB3-205ENST00000556507 EMILIN1Q9Y6C2 1016 aa6.37□□□□□ -1.39
TGFB3-205ENST00000556507 GJD4Q96KN9 370 aaPredicted RBP6.36□□□□□ -1.39
TGFB3-205ENST00000556507 PURBQ96QR8 312 aaKnown RBP6.36□□□□□ -1.39
TGFB3-205ENST00000556507 BAZ1AQ9NRL2 1556 aaPredicted RBP6.35□□□□□ -1.39
TGFB3-205ENST00000556507 UPP2O95045 317 aa6.35□□□□□ -1.39
TGFB3-205ENST00000556507 PPP1R26Q5T8A7 1209 aaPredicted RBP6.35□□□□□ -1.39
TGFB3-205ENST00000556507 DZIP3Q86Y13 1208 aaKnown RBP6.35□□□□□ -1.39
TGFB3-205ENST00000556507 DHX9Q08211 1270 aaKnown RBP6.34□□□□□ -1.39
TGFB3-205ENST00000556507 NBPF20Q3BBV1 942 aa6.34□□□□□ -1.39
TGFB3-205ENST00000556507 INTS6LQ5JSJ4 861 aaKnown RBP6.34□□□□□ -1.39
TGFB3-205ENST00000556507 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
TGFB3-205ENST00000556507 PGPEP1Q9NXJ5 209 aa6.34□□□□□ -1.39
TGFB3-205ENST00000556507 ZBBXA8MT70 800 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 APBB1O00213 710 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 BMP2P12643 396 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 TREML4Q6UXN2 200 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 MTMR14Q8NCE2 650 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 PCGF6Q9BYE7 350 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 SNRKQ9NRH2 765 aa6.33□□□□□ -1.4
TGFB3-205ENST00000556507 SOCS7O14512 581 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 WFS1O76024 890 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 FBXO45P0C2W1 286 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 RAB15P59190 212 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 MEIOBQ8N635 442 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
TGFB3-205ENST00000556507 WIZO95785 1651 aa6.32□□□□□ -1.4
TGFB3-205ENST00000556507 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
TGFB3-205ENST00000556507 TRIM26Q12899 539 aaPredicted RBP6.31□□□□□ -1.4
TGFB3-205ENST00000556507 CBLBQ13191 982 aa6.31□□□□□ -1.4
TGFB3-205ENST00000556507 PCDHB9Q9Y5E1 797 aa6.31□□□□□ -1.4
TGFB3-205ENST00000556507 NDUFB9Q9Y6M9 179 aa6.31□□□□□ -1.4
TGFB3-205ENST00000556507 NFX1Q12986 1120 aaKnown RBP6.3□□□□□ -1.4
TGFB3-205ENST00000556507 NXF1Q9UBU9 619 aaKnown RBP6.3□□□□□ -1.4
TGFB3-205ENST00000556507 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 ESPNB1AK53 854 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 MAN1A2O60476 641 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 NR1H3Q13133 447 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
TGFB3-205ENST00000556507 Q6ZVU0 165 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 TMPRSS4Q9NRS4 437 aa6.29□□□□□ -1.4
TGFB3-205ENST00000556507 ZNF330Q9Y3S2 320 aaPredicted RBP6.29□□□□□ -1.4
TGFB3-205ENST00000556507 ERVH48-1M5A8F1 160 aa6.28□□□□□ -1.4
TGFB3-205ENST00000556507 GIGYF1O75420 1035 aaPredicted RBP6.28□□□□□ -1.4
TGFB3-205ENST00000556507 SEPT12Q8IYM1 358 aa6.28□□□□□ -1.4
TGFB3-205ENST00000556507 SLC16A10Q8TF71 515 aa6.28□□□□□ -1.4
TGFB3-205ENST00000556507 TOP2AP11388 1531 aaKnown RBP6.27□□□□□ -1.41
TGFB3-205ENST00000556507 MCCD1P59942 119 aaPredicted RBP6.27□□□□□ -1.41
TGFB3-205ENST00000556507 ZNF784Q8NCA9 323 aaPredicted RBP6.27□□□□□ -1.41
TGFB3-205ENST00000556507 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
TGFB3-205ENST00000556507 TRIM52Q96A61 297 aa6.27□□□□□ -1.41
TGFB3-205ENST00000556507 SMARCA4P51532 1647 aa6.27□□□□□ -1.41
TGFB3-205ENST00000556507 SOS2Q07890 1332 aaPredicted RBP6.26□□□□□ -1.41
TGFB3-205ENST00000556507 GPR37L1O60883 481 aa6.26□□□□□ -1.41
TGFB3-205ENST00000556507 VEGFBP49765 207 aa6.26□□□□□ -1.41
TGFB3-205ENST00000556507 RELBQ01201 579 aa6.26□□□□□ -1.41
TGFB3-205ENST00000556507 NPAS3Q8IXF0 933 aa6.26□□□□□ -1.41
TGFB3-205ENST00000556507 AGBL1Q96MI9 1066 aa6.26□□□□□ -1.41
TGFB3-205ENST00000556507 TBC1D2BQ9UPU7 963 aa6.26□□□□□ -1.41
TGFB3-205ENST00000556507 UNC13AQ9UPW8 1703 aa6.25□□□□□ -1.41
TGFB3-205ENST00000556507 TTLL8A6PVC2 850 aa6.25□□□□□ -1.41
TGFB3-205ENST00000556507 SPINT1O43278 529 aa6.25□□□□□ -1.41
TGFB3-205ENST00000556507 LILRA1O75019 489 aa6.25□□□□□ -1.41
TGFB3-205ENST00000556507 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
TGFB3-205ENST00000556507 RNF20Q5VTR2 975 aa6.25□□□□□ -1.41
TGFB3-205ENST00000556507 FAM9AQ8IZU1 332 aaPredicted RBP6.25□□□□□ -1.41
TGFB3-205ENST00000556507 CYLDQ9NQC7 956 aa6.25□□□□□ -1.41
TGFB3-205ENST00000556507 CCDC88BA6NC98 1476 aa6.24□□□□□ -1.41
TGFB3-205ENST00000556507 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
TGFB3-205ENST00000556507 ADH1AP07327 375 aa6.24□□□□□ -1.41
TGFB3-205ENST00000556507 CCDC125Q86Z20 511 aa6.24□□□□□ -1.41
TGFB3-205ENST00000556507 ZNF395Q9H8N7 513 aaPredicted RBP6.24□□□□□ -1.41
TGFB3-205ENST00000556507 DNMT3LQ9UJW3 386 aa6.24□□□□□ -1.41
TGFB3-205ENST00000556507 H3BM21 787 aa6.23□□□□□ -1.41
TGFB3-205ENST00000556507 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.23□□□□□ -1.41
TGFB3-205ENST00000556507 IRF7Q92985 503 aa6.23□□□□□ -1.41
TGFB3-205ENST00000556507 INSM2Q96T92 566 aaPredicted RBP6.23□□□□□ -1.41
TGFB3-205ENST00000556507 PTGIRP43119 386 aa6.22□□□□□ -1.41
TGFB3-205ENST00000556507 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms