RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
TDP1-214ENST00000556063 FNBP4Q8N3X1 1017 aaPredicted RBP10.31□□□□□ -0.76
TDP1-214ENST00000556063 IP6K1Q92551 441 aa10.31□□□□□ -0.76
TDP1-214ENST00000556063 ABCC6O95255 1503 aa10.31□□□□□ -0.76
TDP1-214ENST00000556063 FLT4P35916 1363 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 LTN1O94822 1766 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 CSB-PGBD3P0DP91 1061 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 POLKQ9UBT6 870 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 USP21Q9UK80 565 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
TDP1-214ENST00000556063 AFF2P51816 1311 aa10.3□□□□□ -0.76
TDP1-214ENST00000556063 PARD3Q8TEW0 1356 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 FBLN1P23142 703 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 HOXC9P31274 260 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 MTHFSP49914 203 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 UNC5CLQ8IV45 518 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 NWD2Q9ULI1 1742 aa10.29□□□□□ -0.76
TDP1-214ENST00000556063 SLIT2O94813 1529 aa10.28□□□□□ -0.76
TDP1-214ENST00000556063 SMG6Q86US8 1419 aaKnown RBP10.28□□□□□ -0.76
TDP1-214ENST00000556063 PPP2R1AP30153 589 aa10.28□□□□□ -0.76
TDP1-214ENST00000556063 PRKRIP1Q9H875 184 aaPredicted RBP10.28□□□□□ -0.76
TDP1-214ENST00000556063 STRN4Q9NRL3 753 aa10.28□□□□□ -0.76
TDP1-214ENST00000556063 TRPC5Q9UL62 973 aaPredicted RBP10.28□□□□□ -0.76
TDP1-214ENST00000556063 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
TDP1-214ENST00000556063 INSRP06213 1382 aa10.27□□□□□ -0.76
TDP1-214ENST00000556063 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.77
TDP1-214ENST00000556063 CDK12Q9NYV4 1490 aaPredicted RBP10.27□□□□□ -0.77
TDP1-214ENST00000556063 PLCH1Q4KWH8 1693 aa10.27□□□□□ -0.77
TDP1-214ENST00000556063 CAMTA1Q9Y6Y1 1673 aa10.27□□□□□ -0.77
TDP1-214ENST00000556063 COL18A1P39060 1754 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 VPS72Q15906 364 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 HSP90AB2PQ58FF8 381 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 DIEXFQ68CQ4 756 aaKnown RBP10.26□□□□□ -0.77
TDP1-214ENST00000556063 TOM1L2Q6ZVM7 507 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 ANKRD24Q8TF21 1146 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
TDP1-214ENST00000556063 AXIN2Q9Y2T1 843 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 ERBB3P21860 1342 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 WDR17Q8IZU2 1322 aa10.26□□□□□ -0.77
TDP1-214ENST00000556063 LMO7Q8WWI1 1683 aa10.25□□□□□ -0.77
TDP1-214ENST00000556063 COL5A2P05997 1499 aaPredicted RBP10.25□□□□□ -0.77
TDP1-214ENST00000556063 RGPD5Q99666 1765 aa10.25□□□□□ -0.77
TDP1-214ENST00000556063 QTRT2Q9H974 415 aaKnown RBP10.25□□□□□ -0.77
TDP1-214ENST00000556063 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
TDP1-214ENST00000556063 NUDCQ9Y266 331 aa10.25□□□□□ -0.77
TDP1-214ENST00000556063 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.24□□□□□ -0.77
TDP1-214ENST00000556063 BCL9LQ86UU0 1499 aa10.24□□□□□ -0.77
TDP1-214ENST00000556063 DIAPH1O60610 1272 aaKnown RBP10.24□□□□□ -0.77
TDP1-214ENST00000556063 LARP1Q6PKG0 1096 aaKnown RBP10.24□□□□□ -0.77
TDP1-214ENST00000556063 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
TDP1-214ENST00000556063 CRB1P82279 1406 aa10.24□□□□□ -0.77
TDP1-214ENST00000556063 FAM208AQ9UK61 1670 aaKnown RBP10.23□□□□□ -0.77
TDP1-214ENST00000556063 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
TDP1-214ENST00000556063 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
TDP1-214ENST00000556063 GJD4Q96KN9 370 aaPredicted RBP10.23□□□□□ -0.77
TDP1-214ENST00000556063 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
TDP1-214ENST00000556063 NRAPQ86VF7 1730 aa10.23□□□□□ -0.77
TDP1-214ENST00000556063 PEAK1Q9H792 1746 aa10.23□□□□□ -0.77
TDP1-214ENST00000556063 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
TDP1-214ENST00000556063 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
TDP1-214ENST00000556063 ATRNO75882 1429 aa10.23□□□□□ -0.77
TDP1-214ENST00000556063 RXRBP28702 533 aa10.22□□□□□ -0.77
TDP1-214ENST00000556063 EIF4A2Q14240 407 aaKnown RBP10.22□□□□□ -0.77
TDP1-214ENST00000556063 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
TDP1-214ENST00000556063 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
TDP1-214ENST00000556063 SPATA31A1Q5TZJ5 1347 aa10.22□□□□□ -0.77
TDP1-214ENST00000556063 A0A0G2JS52 829 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 U2SURPO15042 1029 aaKnown RBP10.2□□□□□ -0.78
TDP1-214ENST00000556063 IL13P35225 146 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 MYT1Q01538 1121 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 NBPF6Q5VWK0 638 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 BARGINQ6ZT62 677 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 RAPGEF4Q8WZA2 1011 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 NBPF4Q96M43 638 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 EYA1Q99502 592 aa10.2□□□□□ -0.78
TDP1-214ENST00000556063 RGS17Q9UGC6 210 aaPredicted RBP10.2□□□□□ -0.78
TDP1-214ENST00000556063 NEFMP07197 916 aa10.19□□□□□ -0.78
TDP1-214ENST00000556063 IL2RBP14784 551 aa10.19□□□□□ -0.78
TDP1-214ENST00000556063 PNNQ9H307 717 aaKnown RBP10.19□□□□□ -0.78
TDP1-214ENST00000556063 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
TDP1-214ENST00000556063 IGSF1Q8N6C5 1336 aa10.18□□□□□ -0.78
TDP1-214ENST00000556063 U2AF1L5P0DN76 240 aaPredicted RBP10.18□□□□□ -0.78
TDP1-214ENST00000556063 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
TDP1-214ENST00000556063 U2AF1Q01081 240 aaKnown RBP eCLIP10.18□□□□□ -0.78
TDP1-214ENST00000556063 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
TDP1-214ENST00000556063 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
TDP1-214ENST00000556063 POTEAQ6S8J7 498 aa10.18□□□□□ -0.78
TDP1-214ENST00000556063 COL3A1P02461 1466 aaPredicted RBP10.17□□□□□ -0.78
TDP1-214ENST00000556063 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
TDP1-214ENST00000556063 ONECUT3O60422 494 aaPredicted RBP10.17□□□□□ -0.78
TDP1-214ENST00000556063 SULT6B1Q6IMI4 303 aa10.17□□□□□ -0.78
TDP1-214ENST00000556063 RGPD2P0DJD1 1756 aa10.16□□□□□ -0.78
TDP1-214ENST00000556063 PLEKHG2Q9H7P9 1386 aa10.16□□□□□ -0.78
TDP1-214ENST00000556063 EXOC5O00471 708 aa10.16□□□□□ -0.78
TDP1-214ENST00000556063 FCHSD2O94868 740 aa10.16□□□□□ -0.78
TDP1-214ENST00000556063 USHBP1Q8N6Y0 703 aa10.16□□□□□ -0.78
TDP1-214ENST00000556063 GLI3P10071 1580 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms