RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 CDCA7Q9BWT1 371 aaPredicted RBP24.27■■□□□ 1.48
XRCC3-215ENST00000555964 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
XRCC3-215ENST00000555964 DDB1Q16531 1140 aa24.26■■□□□ 1.47
XRCC3-215ENST00000555964 TTC21AQ8NDW8 1320 aa24.26■■□□□ 1.47
XRCC3-215ENST00000555964 WDR17Q8IZU2 1322 aa24.25■■□□□ 1.47
XRCC3-215ENST00000555964 TTC21BQ7Z4L5 1316 aa24.23■■□□□ 1.47
XRCC3-215ENST00000555964 ABCC6O95255 1503 aa24.23■■□□□ 1.47
XRCC3-215ENST00000555964 RGPD5Q99666 1765 aa24.22■■□□□ 1.47
XRCC3-215ENST00000555964 ARHGEF25Q86VW2 580 aa24.2■■□□□ 1.46
XRCC3-215ENST00000555964 MON2Q7Z3U7 1717 aa24.2■■□□□ 1.46
XRCC3-215ENST00000555964 BCL9O00512 1426 aa24.19■■□□□ 1.46
XRCC3-215ENST00000555964 PLSCR1O15162 318 aa24.19■■□□□ 1.46
XRCC3-215ENST00000555964 CSB-PGBD3P0DP91 1061 aa24.19■■□□□ 1.46
XRCC3-215ENST00000555964 KTN1Q86UP2 1357 aaKnown RBP24.18■■□□□ 1.46
XRCC3-215ENST00000555964 BCL11BQ9C0K0 894 aaPredicted RBP24.18■■□□□ 1.46
XRCC3-215ENST00000555964 SPON1Q9HCB6 807 aa24.18■■□□□ 1.46
XRCC3-215ENST00000555964 SBNO2Q9Y2G9 1366 aa24.17■■□□□ 1.46
XRCC3-215ENST00000555964 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
XRCC3-215ENST00000555964 SIN3AQ96ST3 1273 aa24.17■■□□□ 1.46
XRCC3-215ENST00000555964 CARD10Q9BWT7 1032 aa24.17■■□□□ 1.46
XRCC3-215ENST00000555964 CCDC7Q96M83 1385 aa24.16■■□□□ 1.46
XRCC3-215ENST00000555964 NFAT5O94916 1531 aa24.16■■□□□ 1.46
XRCC3-215ENST00000555964 PPP1R1BQ9UD71 204 aaPredicted RBP24.16■■□□□ 1.46
XRCC3-215ENST00000555964 AXIN2Q9Y2T1 843 aa24.16■■□□□ 1.46
XRCC3-215ENST00000555964 USP54Q70EL1 1684 aa24.15■■□□□ 1.46
XRCC3-215ENST00000555964 SOX12O15370 315 aa24.14■■□□□ 1.45
XRCC3-215ENST00000555964 KCNQ2O43526 872 aa24.13■■□□□ 1.45
XRCC3-215ENST00000555964 DCAF8L1A6NGE4 600 aa24.12■■□□□ 1.45
XRCC3-215ENST00000555964 NINLQ9Y2I6 1382 aa24.12■■□□□ 1.45
XRCC3-215ENST00000555964 EXOC5O00471 708 aa24.1■■□□□ 1.45
XRCC3-215ENST00000555964 MARCH10Q8NA82 808 aaPredicted RBP24.1■■□□□ 1.45
XRCC3-215ENST00000555964 LTN1O94822 1766 aa24.1■■□□□ 1.45
XRCC3-215ENST00000555964 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
XRCC3-215ENST00000555964 USP31Q70CQ4 1352 aa24.09■■□□□ 1.45
XRCC3-215ENST00000555964 CASZ1Q86V15 1759 aa24.08■■□□□ 1.45
XRCC3-215ENST00000555964 HDGFL2Q7Z4V5 671 aaPredicted RBP24.07■■□□□ 1.44
XRCC3-215ENST00000555964 CARD11Q9BXL7 1154 aa24.07■■□□□ 1.44
XRCC3-215ENST00000555964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.06■■□□□ 1.44
XRCC3-215ENST00000555964 KAT6BQ8WYB5 2073 aa24.06■■□□□ 1.44
XRCC3-215ENST00000555964 NHSQ6T4R5 1651 aa24.05■■□□□ 1.44
XRCC3-215ENST00000555964 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
XRCC3-215ENST00000555964 ANO8Q9HCE9 1232 aaPredicted RBP24.04■■□□□ 1.44
XRCC3-215ENST00000555964 ERBB3P21860 1342 aa24.04■■□□□ 1.44
XRCC3-215ENST00000555964 EDC4Q6P2E9 1401 aaKnown RBP24.03■■□□□ 1.44
XRCC3-215ENST00000555964 STK32BQ9NY57 414 aa24.03■■□□□ 1.44
XRCC3-215ENST00000555964 TERF2IPQ9NYB0 399 aa24.03■■□□□ 1.44
XRCC3-215ENST00000555964 CD163L1Q9NR16 1453 aa24.01■■□□□ 1.43
XRCC3-215ENST00000555964 YY1P25490 414 aa24.01■■□□□ 1.43
XRCC3-215ENST00000555964 NLRP2Q9NX02 1062 aa24.01■■□□□ 1.43
XRCC3-215ENST00000555964 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
XRCC3-215ENST00000555964 FAM208AQ9UK61 1670 aaKnown RBP24■■□□□ 1.43
XRCC3-215ENST00000555964 TXNRD1Q16881 649 aa24■■□□□ 1.43
XRCC3-215ENST00000555964 PTF1AQ7RTS3 328 aa24■■□□□ 1.43
XRCC3-215ENST00000555964 PUS7Q96PZ0 661 aaKnown RBP24■■□□□ 1.43
XRCC3-215ENST00000555964 IL2RBP14784 551 aa23.99■■□□□ 1.43
XRCC3-215ENST00000555964 NME9Q86XW9 330 aa23.99■■□□□ 1.43
XRCC3-215ENST00000555964 PROM2Q8N271 834 aa23.98■■□□□ 1.43
XRCC3-215ENST00000555964 SLC24A1O60721 1099 aa23.96■■□□□ 1.43
XRCC3-215ENST00000555964 BTAF1O14981 1849 aa23.96■■□□□ 1.43
XRCC3-215ENST00000555964 A0A1W2PP64 1363 aa23.95■■□□□ 1.42
XRCC3-215ENST00000555964 SLC15A2Q16348 729 aa23.95■■□□□ 1.42
XRCC3-215ENST00000555964 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
XRCC3-215ENST00000555964 SLC12A5Q9H2X9 1139 aa23.95■■□□□ 1.42
XRCC3-215ENST00000555964 MYOM1P52179 1685 aa23.95■■□□□ 1.42
XRCC3-215ENST00000555964 ZBTB7AO95365 584 aa23.94■■□□□ 1.42
XRCC3-215ENST00000555964 MTFR1LQ9H019 292 aa23.92■■□□□ 1.42
XRCC3-215ENST00000555964 ACSBG1Q96GR2 724 aa23.91■■□□□ 1.42
XRCC3-215ENST00000555964 PAPPAQ13219 1627 aa23.89■■□□□ 1.42
XRCC3-215ENST00000555964 PTGER2P43116 358 aa23.89■■□□□ 1.41
XRCC3-215ENST00000555964 IP6K1Q92551 441 aa23.89■■□□□ 1.41
XRCC3-215ENST00000555964 PDGFDQ9GZP0 370 aaPredicted RBP23.89■■□□□ 1.41
XRCC3-215ENST00000555964 ATF5Q9Y2D1 282 aaPredicted RBP23.88■■□□□ 1.41
XRCC3-215ENST00000555964 COG3Q96JB2 828 aa23.87■■□□□ 1.41
XRCC3-215ENST00000555964 QSER1Q2KHR3 1735 aa23.84■■□□□ 1.41
XRCC3-215ENST00000555964 CHD4Q14839 1912 aa23.83■■□□□ 1.41
XRCC3-215ENST00000555964 AMPHP49418 695 aa23.82■■□□□ 1.4
XRCC3-215ENST00000555964 SLC27A3Q5K4L6 730 aa23.82■■□□□ 1.4
XRCC3-215ENST00000555964 ANKRD36BQ8N2N9 1353 aa23.81■■□□□ 1.4
XRCC3-215ENST00000555964 DDX54Q8TDD1 881 aaKnown RBP23.81■■□□□ 1.4
XRCC3-215ENST00000555964 LTV1Q96GA3 475 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-215ENST00000555964 TESK2Q96S53 571 aa23.81■■□□□ 1.4
XRCC3-215ENST00000555964 FHDC1Q9C0D6 1143 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-215ENST00000555964 RTL1A6NKG5 1358 aa23.8■■□□□ 1.4
XRCC3-215ENST00000555964 ST20-MTHFSA0A0A6YYL1 179 aa23.8■■□□□ 1.4
XRCC3-215ENST00000555964 SYT17Q9BSW7 474 aa23.8■■□□□ 1.4
XRCC3-215ENST00000555964 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
XRCC3-215ENST00000555964 ARXQ96QS3 562 aa23.79■■□□□ 1.4
XRCC3-215ENST00000555964 SGIP1Q9BQI5 828 aa23.79■■□□□ 1.4
XRCC3-215ENST00000555964 MAP3K19Q56UN5 1328 aa23.79■■□□□ 1.4
XRCC3-215ENST00000555964 MAP3K5Q99683 1374 aa23.78■■□□□ 1.4
XRCC3-215ENST00000555964 HOXC9P31274 260 aa23.78■■□□□ 1.4
XRCC3-215ENST00000555964 SMG6Q86US8 1419 aaKnown RBP23.77■■□□□ 1.4
XRCC3-215ENST00000555964 SLC16A10Q8TF71 515 aa23.77■■□□□ 1.4
XRCC3-215ENST00000555964 RGPD2P0DJD1 1756 aa23.77■■□□□ 1.4
XRCC3-215ENST00000555964 LY75O60449 1722 aa23.76■■□□□ 1.39
XRCC3-215ENST00000555964 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
XRCC3-215ENST00000555964 TMF1P82094 1093 aa23.75■■□□□ 1.39
XRCC3-215ENST00000555964 ZNF827Q17R98 1081 aa23.75■■□□□ 1.39
XRCC3-215ENST00000555964 SYTL4Q96C24 671 aaPredicted RBP23.75■■□□□ 1.39
XRCC3-215ENST00000555964 CGNL1Q0VF96 1302 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms