RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 SLIT3O75094 1523 aa13.53□□□□□ -0.24
PRKCH-215ENST00000555382 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRKCH-215ENST00000555382 PPP1R1BQ9UD71 204 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-215ENST00000555382 USP47Q96K76 1375 aa13.52□□□□□ -0.25
PRKCH-215ENST00000555382 CRB1P82279 1406 aa13.52□□□□□ -0.25
PRKCH-215ENST00000555382 CHD4Q14839 1912 aa13.52□□□□□ -0.25
PRKCH-215ENST00000555382 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
PRKCH-215ENST00000555382 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
PRKCH-215ENST00000555382 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
PRKCH-215ENST00000555382 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
PRKCH-215ENST00000555382 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
PRKCH-215ENST00000555382 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
PRKCH-215ENST00000555382 ACEP12821 1306 aa13.5□□□□□ -0.25
PRKCH-215ENST00000555382 CENPJQ9HC77 1338 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-215ENST00000555382 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-215ENST00000555382 PUS7Q96PZ0 661 aaKnown RBP13.5□□□□□ -0.25
PRKCH-215ENST00000555382 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
PRKCH-215ENST00000555382 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
PRKCH-215ENST00000555382 GCP02774 474 aa13.47□□□□□ -0.25
PRKCH-215ENST00000555382 EVA1CP58658 441 aa13.47□□□□□ -0.25
PRKCH-215ENST00000555382 TESK2Q96S53 571 aa13.47□□□□□ -0.25
PRKCH-215ENST00000555382 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
PRKCH-215ENST00000555382 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-215ENST00000555382 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
PRKCH-215ENST00000555382 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
PRKCH-215ENST00000555382 ST20-MTHFSA0A0A6YYL1 179 aa13.46□□□□□ -0.25
PRKCH-215ENST00000555382 ZBTB7AO95365 584 aa13.46□□□□□ -0.25
PRKCH-215ENST00000555382 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
PRKCH-215ENST00000555382 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
PRKCH-215ENST00000555382 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
PRKCH-215ENST00000555382 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-215ENST00000555382 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-215ENST00000555382 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
PRKCH-215ENST00000555382 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
PRKCH-215ENST00000555382 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-215ENST00000555382 USP6P35125 1406 aa13.44□□□□□ -0.26
PRKCH-215ENST00000555382 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
PRKCH-215ENST00000555382 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
PRKCH-215ENST00000555382 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
PRKCH-215ENST00000555382 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
PRKCH-215ENST00000555382 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
PRKCH-215ENST00000555382 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
PRKCH-215ENST00000555382 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
PRKCH-215ENST00000555382 DDB1Q16531 1140 aa13.42□□□□□ -0.26
PRKCH-215ENST00000555382 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
PRKCH-215ENST00000555382 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
PRKCH-215ENST00000555382 NFAT5O94916 1531 aa13.41□□□□□ -0.26
PRKCH-215ENST00000555382 TMF1P82094 1093 aa13.41□□□□□ -0.26
PRKCH-215ENST00000555382 NLRP13Q86W25 1043 aa13.41□□□□□ -0.26
PRKCH-215ENST00000555382 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
PRKCH-215ENST00000555382 TNS2Q63HR2 1409 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 ABCC6O95255 1503 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
PRKCH-215ENST00000555382 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
PRKCH-215ENST00000555382 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
PRKCH-215ENST00000555382 BTAF1O14981 1849 aa13.38□□□□□ -0.27
PRKCH-215ENST00000555382 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
PRKCH-215ENST00000555382 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
PRKCH-215ENST00000555382 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
PRKCH-215ENST00000555382 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
PRKCH-215ENST00000555382 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
PRKCH-215ENST00000555382 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
PRKCH-215ENST00000555382 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
PRKCH-215ENST00000555382 NLRP6P59044 892 aa13.33□□□□□ -0.28
PRKCH-215ENST00000555382 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
PRKCH-215ENST00000555382 ARXQ96QS3 562 aa13.33□□□□□ -0.28
PRKCH-215ENST00000555382 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
PRKCH-215ENST00000555382 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
PRKCH-215ENST00000555382 SRPK2P78362 688 aaKnown RBP13.31□□□□□ -0.28
PRKCH-215ENST00000555382 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
PRKCH-215ENST00000555382 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
PRKCH-215ENST00000555382 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
PRKCH-215ENST00000555382 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
PRKCH-215ENST00000555382 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
PRKCH-215ENST00000555382 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
PRKCH-215ENST00000555382 WASHC2AQ641Q2 1341 aa13.29□□□□□ -0.28
PRKCH-215ENST00000555382 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
PRKCH-215ENST00000555382 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-215ENST00000555382 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-215ENST00000555382 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
PRKCH-215ENST00000555382 LY75O60449 1722 aa13.27□□□□□ -0.28
PRKCH-215ENST00000555382 EXOC5O00471 708 aa13.27□□□□□ -0.29
PRKCH-215ENST00000555382 ERBB3P21860 1342 aa13.27□□□□□ -0.29
PRKCH-215ENST00000555382 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
PRKCH-215ENST00000555382 LTN1O94822 1766 aa13.27□□□□□ -0.29
PRKCH-215ENST00000555382 ANKRD36BQ8N2N9 1353 aa13.26□□□□□ -0.29
PRKCH-215ENST00000555382 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
PRKCH-215ENST00000555382 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
PRKCH-215ENST00000555382 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
PRKCH-215ENST00000555382 ADCY9O60503 1353 aa13.25□□□□□ -0.29
PRKCH-215ENST00000555382 NSD2O96028 1365 aa13.25□□□□□ -0.29
PRKCH-215ENST00000555382 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
PRKCH-215ENST00000555382 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
PRKCH-215ENST00000555382 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
PRKCH-215ENST00000555382 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
PRKCH-215ENST00000555382 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms