RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
SYNE2-219ENST00000555323 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
SYNE2-219ENST00000555323 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
SYNE2-219ENST00000555323 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
SYNE2-219ENST00000555323 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
SYNE2-219ENST00000555323 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
SYNE2-219ENST00000555323 USP21Q9UK80 565 aa17.17■□□□□ 0.34
SYNE2-219ENST00000555323 AFF2P51816 1311 aa17.17■□□□□ 0.34
SYNE2-219ENST00000555323 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
SYNE2-219ENST00000555323 INSRP06213 1382 aa17.16■□□□□ 0.34
SYNE2-219ENST00000555323 FLT4P35916 1363 aa17.16■□□□□ 0.34
SYNE2-219ENST00000555323 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
SYNE2-219ENST00000555323 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
SYNE2-219ENST00000555323 ZNF772Q68DY9 489 aaPredicted RBP17.15■□□□□ 0.34
SYNE2-219ENST00000555323 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
SYNE2-219ENST00000555323 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.34
SYNE2-219ENST00000555323 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
SYNE2-219ENST00000555323 ANP32CO43423 234 aa17.14■□□□□ 0.33
SYNE2-219ENST00000555323 EVA1CP58658 441 aa17.14■□□□□ 0.33
SYNE2-219ENST00000555323 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
SYNE2-219ENST00000555323 VPS72Q15906 364 aa17.13■□□□□ 0.33
SYNE2-219ENST00000555323 ERBB3P21860 1342 aa17.13■□□□□ 0.33
SYNE2-219ENST00000555323 MYBBP1AQ9BQG0 1328 aaKnown RBP17.13■□□□□ 0.33
SYNE2-219ENST00000555323 NWD2Q9ULI1 1742 aa17.13■□□□□ 0.33
SYNE2-219ENST00000555323 LTN1O94822 1766 aa17.12■□□□□ 0.33
SYNE2-219ENST00000555323 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
SYNE2-219ENST00000555323 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
SYNE2-219ENST00000555323 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
SYNE2-219ENST00000555323 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
SYNE2-219ENST00000555323 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
SYNE2-219ENST00000555323 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
SYNE2-219ENST00000555323 QTRT2Q9H974 415 aaKnown RBP17.11■□□□□ 0.33
SYNE2-219ENST00000555323 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
SYNE2-219ENST00000555323 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
SYNE2-219ENST00000555323 PLCH1Q4KWH8 1693 aa17.1■□□□□ 0.33
SYNE2-219ENST00000555323 IL13P35225 146 aa17.09■□□□□ 0.33
SYNE2-219ENST00000555323 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
SYNE2-219ENST00000555323 GJD4Q96KN9 370 aaPredicted RBP17.09■□□□□ 0.33
SYNE2-219ENST00000555323 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
SYNE2-219ENST00000555323 ATRNO75882 1429 aa17.09■□□□□ 0.33
SYNE2-219ENST00000555323 SPATA31A5Q5VU36 1347 aa17.08■□□□□ 0.32
SYNE2-219ENST00000555323 SPATA31A7Q8IWB4 1347 aa17.08■□□□□ 0.32
SYNE2-219ENST00000555323 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
SYNE2-219ENST00000555323 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
SYNE2-219ENST00000555323 CRB1P82279 1406 aa17.07■□□□□ 0.32
SYNE2-219ENST00000555323 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
SYNE2-219ENST00000555323 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
SYNE2-219ENST00000555323 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SYNE2-219ENST00000555323 LTV1Q96GA3 475 aaPredicted RBP17.07■□□□□ 0.32
SYNE2-219ENST00000555323 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
SYNE2-219ENST00000555323 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
SYNE2-219ENST00000555323 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
SYNE2-219ENST00000555323 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
SYNE2-219ENST00000555323 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
SYNE2-219ENST00000555323 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
SYNE2-219ENST00000555323 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
SYNE2-219ENST00000555323 POTEAQ6S8J7 498 aa17.05■□□□□ 0.32
SYNE2-219ENST00000555323 BARGINQ6ZT62 677 aa17.05■□□□□ 0.32
SYNE2-219ENST00000555323 EYA1Q99502 592 aa17.05■□□□□ 0.32
SYNE2-219ENST00000555323 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
SYNE2-219ENST00000555323 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
SYNE2-219ENST00000555323 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
SYNE2-219ENST00000555323 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
SYNE2-219ENST00000555323 NCAPD2Q15021 1401 aa17.03■□□□□ 0.32
SYNE2-219ENST00000555323 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
SYNE2-219ENST00000555323 RXRBP28702 533 aa17.02■□□□□ 0.32
SYNE2-219ENST00000555323 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
SYNE2-219ENST00000555323 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.32
SYNE2-219ENST00000555323 CDCA7Q9BWT1 371 aaPredicted RBP17■□□□□ 0.31
SYNE2-219ENST00000555323 USP35Q9P2H5 1018 aa17■□□□□ 0.31
SYNE2-219ENST00000555323 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
SYNE2-219ENST00000555323 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
SYNE2-219ENST00000555323 KDRP35968 1356 aa16.99■□□□□ 0.31
SYNE2-219ENST00000555323 GLI3P10071 1580 aa16.98■□□□□ 0.31
SYNE2-219ENST00000555323 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
SYNE2-219ENST00000555323 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
SYNE2-219ENST00000555323 IL2RBP14784 551 aa16.97■□□□□ 0.31
SYNE2-219ENST00000555323 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SYNE2-219ENST00000555323 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
SYNE2-219ENST00000555323 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
SYNE2-219ENST00000555323 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
SYNE2-219ENST00000555323 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
SYNE2-219ENST00000555323 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.3
SYNE2-219ENST00000555323 FCHSD2O94868 740 aa16.95■□□□□ 0.3
SYNE2-219ENST00000555323 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
SYNE2-219ENST00000555323 MIER1Q8N108 512 aa16.95■□□□□ 0.3
SYNE2-219ENST00000555323 U2AF1L5P0DN76 240 aaPredicted RBP16.94■□□□□ 0.3
SYNE2-219ENST00000555323 U2AF1Q01081 240 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNE2-219ENST00000555323 PNISRQ8TF01 805 aaKnown RBP16.94■□□□□ 0.3
SYNE2-219ENST00000555323 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
SYNE2-219ENST00000555323 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
SYNE2-219ENST00000555323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNE2-219ENST00000555323 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
SYNE2-219ENST00000555323 HMOX1P09601 288 aa16.93■□□□□ 0.3
SYNE2-219ENST00000555323 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
SYNE2-219ENST00000555323 SEPT12Q8IYM1 358 aa16.93■□□□□ 0.3
SYNE2-219ENST00000555323 EXOC5O00471 708 aa16.92■□□□□ 0.3
SYNE2-219ENST00000555323 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
SYNE2-219ENST00000555323 DDB1Q16531 1140 aa16.91■□□□□ 0.3
SYNE2-219ENST00000555323 ADAMTS8Q9UP79 889 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms