RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 PLEKHG1Q9ULL1 1385 aa9.45□□□□□ -0.9
TGFB3-202ENST00000554980 RAB11FIP3O75154 756 aa9.45□□□□□ -0.9
TGFB3-202ENST00000554980 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
TGFB3-202ENST00000554980 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
TGFB3-202ENST00000554980 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
TGFB3-202ENST00000554980 KCNA6P17658 529 aa9.45□□□□□ -0.9
TGFB3-202ENST00000554980 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
TGFB3-202ENST00000554980 CC2D1BQ5T0F9 858 aaKnown RBP9.45□□□□□ -0.9
TGFB3-202ENST00000554980 CENPJQ9HC77 1338 aaPredicted RBP9.44□□□□□ -0.9
TGFB3-202ENST00000554980 TOM1O60784 492 aa9.44□□□□□ -0.9
TGFB3-202ENST00000554980 NBPF9Q3BBW0 867 aa9.44□□□□□ -0.9
TGFB3-202ENST00000554980 MPHOSPH9Q99550 1183 aa9.44□□□□□ -0.9
TGFB3-202ENST00000554980 TRPM2O94759 1503 aa9.44□□□□□ -0.9
TGFB3-202ENST00000554980 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-202ENST00000554980 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-202ENST00000554980 PROSER2Q86WR7 435 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-202ENST00000554980 MPNDQ8N594 471 aa9.43□□□□□ -0.9
TGFB3-202ENST00000554980 PTPRUQ92729 1446 aa9.43□□□□□ -0.9
TGFB3-202ENST00000554980 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-202ENST00000554980 NRXN3Q9Y4C0 1643 aa9.43□□□□□ -0.9
TGFB3-202ENST00000554980 UBA5Q9GZZ9 404 aa9.42□□□□□ -0.9
TGFB3-202ENST00000554980 MAP4K4O95819 1239 aaPredicted RBP9.42□□□□□ -0.9
TGFB3-202ENST00000554980 MAMSTRQ6ZN01 415 aa9.42□□□□□ -0.9
TGFB3-202ENST00000554980 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
TGFB3-202ENST00000554980 TBX22Q9Y458 520 aa9.42□□□□□ -0.9
TGFB3-202ENST00000554980 CHD2O14647 1828 aaKnown RBP9.42□□□□□ -0.9
TGFB3-202ENST00000554980 NEXMIFQ5QGS0 1516 aa9.42□□□□□ -0.9
TGFB3-202ENST00000554980 METP08581 1390 aa9.41□□□□□ -0.9
TGFB3-202ENST00000554980 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
TGFB3-202ENST00000554980 FOSBP53539 338 aa9.41□□□□□ -0.9
TGFB3-202ENST00000554980 TCERG1O14776 1098 aaKnown RBP9.41□□□□□ -0.9
TGFB3-202ENST00000554980 ANP32CO43423 234 aa9.41□□□□□ -0.9
TGFB3-202ENST00000554980 RHBDL3P58872 404 aa9.41□□□□□ -0.9
TGFB3-202ENST00000554980 DNAJC14Q6Y2X3 702 aaPredicted RBP9.41□□□□□ -0.9
TGFB3-202ENST00000554980 SETD5Q9C0A6 1442 aa9.41□□□□□ -0.9
TGFB3-202ENST00000554980 NWD1Q149M9 1564 aa9.4□□□□□ -0.9
TGFB3-202ENST00000554980 NRDCO43847 1150 aa9.4□□□□□ -0.9
TGFB3-202ENST00000554980 CALRP27797 417 aaKnown RBP9.4□□□□□ -0.9
TGFB3-202ENST00000554980 RGL3Q3MIN7 710 aa9.4□□□□□ -0.9
TGFB3-202ENST00000554980 ILDR2Q71H61 639 aa9.4□□□□□ -0.9
TGFB3-202ENST00000554980 MORC4Q8TE76 937 aa9.4□□□□□ -0.9
TGFB3-202ENST00000554980 PNMA2Q9UL42 364 aa9.4□□□□□ -0.9
TGFB3-202ENST00000554980 GOLIM4O00461 696 aa9.4□□□□□ -0.91
TGFB3-202ENST00000554980 HDGFP51858 240 aaKnown RBP9.4□□□□□ -0.91
TGFB3-202ENST00000554980 ZFYVE27Q5T4F4 411 aa9.4□□□□□ -0.91
TGFB3-202ENST00000554980 HS6ST3Q8IZP7 471 aa9.4□□□□□ -0.91
TGFB3-202ENST00000554980 ZNF280DQ6N043 979 aa9.39□□□□□ -0.91
TGFB3-202ENST00000554980 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
TGFB3-202ENST00000554980 KIF1BO60333 1816 aa9.39□□□□□ -0.91
TGFB3-202ENST00000554980 EPB41L2O43491 1005 aaKnown RBP9.39□□□□□ -0.91
TGFB3-202ENST00000554980 PAX3P23760 479 aa9.39□□□□□ -0.91
TGFB3-202ENST00000554980 HSP90AB3PQ58FF7 597 aa9.39□□□□□ -0.91
TGFB3-202ENST00000554980 DHX16O60231 1041 aaKnown RBP9.38□□□□□ -0.91
TGFB3-202ENST00000554980 CCDC181Q5TID7 509 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 CLEC4GQ6UXB4 293 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 DISP3Q9P2K9 1392 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 GOLGA6CA6NDK9 693 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 GOLGA6BA6NDN3 693 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 KIF4AO95239 1232 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 GOLGA6DP0CG33 693 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 CACTIN-AS1Q8N1I8 211 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 MKL1Q969V6 931 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 GOLGA6AQ9NYA3 693 aa9.38□□□□□ -0.91
TGFB3-202ENST00000554980 ADGRF5Q8IZF2 1346 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 EXOC5O00471 708 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 CREB3O43889 395 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 SETDB1Q15047 1291 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 DDX46Q7L014 1031 aaKnown RBP9.37□□□□□ -0.91
TGFB3-202ENST00000554980 MIER1Q8N108 512 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 SETBP1Q9Y6X0 1596 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 SCP2P22307 547 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 GIMAP6Q6P9H5 292 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 GET4Q7L5D6 327 aaPredicted RBP9.37□□□□□ -0.91
TGFB3-202ENST00000554980 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
TGFB3-202ENST00000554980 NKTRP30414 1462 aaKnown RBP9.37□□□□□ -0.91
TGFB3-202ENST00000554980 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
TGFB3-202ENST00000554980 DRC1Q96MC2 740 aa9.36□□□□□ -0.91
TGFB3-202ENST00000554980 SPATA31E1Q6ZUB1 1445 aa9.36□□□□□ -0.91
TGFB3-202ENST00000554980 APLP1P51693 650 aa9.36□□□□□ -0.91
TGFB3-202ENST00000554980 KLHL42Q9P2K6 505 aa9.36□□□□□ -0.91
TGFB3-202ENST00000554980 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
TGFB3-202ENST00000554980 KIAA1522Q9P206 1035 aaPredicted RBP9.35□□□□□ -0.91
TGFB3-202ENST00000554980 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
TGFB3-202ENST00000554980 CCDC144AA2RUR9 1427 aa9.35□□□□□ -0.91
TGFB3-202ENST00000554980 ATL2Q8NHH9 583 aa9.35□□□□□ -0.91
TGFB3-202ENST00000554980 MAGEC2Q9UBF1 373 aaPredicted RBP9.35□□□□□ -0.91
TGFB3-202ENST00000554980 PPLO60437 1756 aa9.35□□□□□ -0.91
TGFB3-202ENST00000554980 ROBO1Q9Y6N7 1651 aa9.35□□□□□ -0.91
TGFB3-202ENST00000554980 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.91
TGFB3-202ENST00000554980 DIP2AQ14689 1571 aa9.34□□□□□ -0.91
TGFB3-202ENST00000554980 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
TGFB3-202ENST00000554980 MSH6P52701 1360 aa9.34□□□□□ -0.91
TGFB3-202ENST00000554980 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
TGFB3-202ENST00000554980 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
TGFB3-202ENST00000554980 MSL3Q8N5Y2 521 aaKnown RBP9.34□□□□□ -0.91
TGFB3-202ENST00000554980 XRN1Q8IZH2 1706 aaKnown RBP9.34□□□□□ -0.91
TGFB3-202ENST00000554980 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.34□□□□□ -0.91
TGFB3-202ENST00000554980 A6NJR5 290 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 TMEM132EQ6IEE7 984 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 MAF1Q9H063 256 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms