RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
PSMC6-207ENST00000554952 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
PSMC6-207ENST00000554952 CAPN15O75808 1086 aa16.74■□□□□ 0.27
PSMC6-207ENST00000554952 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
PSMC6-207ENST00000554952 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
PSMC6-207ENST00000554952 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
PSMC6-207ENST00000554952 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
PSMC6-207ENST00000554952 DSG3P32926 999 aa16.73■□□□□ 0.27
PSMC6-207ENST00000554952 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
PSMC6-207ENST00000554952 SLIT3O75094 1523 aa16.73■□□□□ 0.27
PSMC6-207ENST00000554952 CRB1P82279 1406 aa16.72■□□□□ 0.27
PSMC6-207ENST00000554952 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
PSMC6-207ENST00000554952 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
PSMC6-207ENST00000554952 NME9Q86XW9 330 aa16.72■□□□□ 0.27
PSMC6-207ENST00000554952 PUS7Q96PZ0 661 aaKnown RBP16.72■□□□□ 0.27
PSMC6-207ENST00000554952 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
PSMC6-207ENST00000554952 APBA3O96018 575 aa16.71■□□□□ 0.27
PSMC6-207ENST00000554952 TESK2Q96S53 571 aa16.71■□□□□ 0.27
PSMC6-207ENST00000554952 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
PSMC6-207ENST00000554952 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
PSMC6-207ENST00000554952 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
PSMC6-207ENST00000554952 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
PSMC6-207ENST00000554952 CD163L1Q9NR16 1453 aa16.68■□□□□ 0.26
PSMC6-207ENST00000554952 DDB1Q16531 1140 aa16.68■□□□□ 0.26
PSMC6-207ENST00000554952 RGPD1P0DJD0 1748 aa16.67■□□□□ 0.26
PSMC6-207ENST00000554952 USP31Q70CQ4 1352 aa16.67■□□□□ 0.26
PSMC6-207ENST00000554952 COL18A1P39060 1754 aa16.67■□□□□ 0.26
PSMC6-207ENST00000554952 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
PSMC6-207ENST00000554952 CAMKK2Q96RR4 588 aa16.67■□□□□ 0.26
PSMC6-207ENST00000554952 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
PSMC6-207ENST00000554952 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
PSMC6-207ENST00000554952 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
PSMC6-207ENST00000554952 POTEHQ6S545 545 aa16.65■□□□□ 0.26
PSMC6-207ENST00000554952 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
PSMC6-207ENST00000554952 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
PSMC6-207ENST00000554952 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
PSMC6-207ENST00000554952 TMF1P82094 1093 aa16.64■□□□□ 0.25
PSMC6-207ENST00000554952 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
PSMC6-207ENST00000554952 DISP2A7MBM2 1401 aa16.63■□□□□ 0.25
PSMC6-207ENST00000554952 EXOC5O00471 708 aa16.63■□□□□ 0.25
PSMC6-207ENST00000554952 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
PSMC6-207ENST00000554952 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
PSMC6-207ENST00000554952 NFAT5O94916 1531 aa16.63■□□□□ 0.25
PSMC6-207ENST00000554952 USP47Q96K76 1375 aa16.63■□□□□ 0.25
PSMC6-207ENST00000554952 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
PSMC6-207ENST00000554952 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
PSMC6-207ENST00000554952 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
PSMC6-207ENST00000554952 TNS1Q9HBL0 1735 aaKnown RBP16.61■□□□□ 0.25
PSMC6-207ENST00000554952 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
PSMC6-207ENST00000554952 COG3Q96JB2 828 aa16.6■□□□□ 0.25
PSMC6-207ENST00000554952 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
PSMC6-207ENST00000554952 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
PSMC6-207ENST00000554952 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
PSMC6-207ENST00000554952 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
PSMC6-207ENST00000554952 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
PSMC6-207ENST00000554952 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
PSMC6-207ENST00000554952 FBLN1P23142 703 aa16.58■□□□□ 0.24
PSMC6-207ENST00000554952 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
PSMC6-207ENST00000554952 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
PSMC6-207ENST00000554952 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
PSMC6-207ENST00000554952 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
PSMC6-207ENST00000554952 ERBB3P21860 1342 aa16.58■□□□□ 0.24
PSMC6-207ENST00000554952 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
PSMC6-207ENST00000554952 IP6K1Q92551 441 aa16.57■□□□□ 0.24
PSMC6-207ENST00000554952 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
PSMC6-207ENST00000554952 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
PSMC6-207ENST00000554952 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
PSMC6-207ENST00000554952 IL2RBP14784 551 aa16.55■□□□□ 0.24
PSMC6-207ENST00000554952 AMPHP49418 695 aa16.55■□□□□ 0.24
PSMC6-207ENST00000554952 USP54Q70EL1 1684 aa16.55■□□□□ 0.24
PSMC6-207ENST00000554952 ABCC6O95255 1503 aa16.55■□□□□ 0.24
PSMC6-207ENST00000554952 LTN1O94822 1766 aa16.54■□□□□ 0.24
PSMC6-207ENST00000554952 FYB1O15117 783 aa16.54■□□□□ 0.24
PSMC6-207ENST00000554952 PLSCR1O15162 318 aa16.54■□□□□ 0.24
PSMC6-207ENST00000554952 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
PSMC6-207ENST00000554952 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
PSMC6-207ENST00000554952 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
PSMC6-207ENST00000554952 MAP3K19Q56UN5 1328 aa16.53■□□□□ 0.24
PSMC6-207ENST00000554952 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
PSMC6-207ENST00000554952 KCNQ2O43526 872 aa16.51■□□□□ 0.23
PSMC6-207ENST00000554952 HOXC9P31274 260 aa16.51■□□□□ 0.23
PSMC6-207ENST00000554952 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
PSMC6-207ENST00000554952 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
PSMC6-207ENST00000554952 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
PSMC6-207ENST00000554952 WNK3Q9BYP7 1800 aa16.51■□□□□ 0.23
PSMC6-207ENST00000554952 PROM2Q8N271 834 aa16.5■□□□□ 0.23
PSMC6-207ENST00000554952 BCL9O00512 1426 aa16.5■□□□□ 0.23
PSMC6-207ENST00000554952 DDX54Q8TDD1 881 aaKnown RBP16.49■□□□□ 0.23
PSMC6-207ENST00000554952 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
PSMC6-207ENST00000554952 CARD14Q9BXL6 1004 aa16.49■□□□□ 0.23
PSMC6-207ENST00000554952 TNS2Q63HR2 1409 aa16.48■□□□□ 0.23
PSMC6-207ENST00000554952 RREB1Q92766 1687 aa16.47■□□□□ 0.23
PSMC6-207ENST00000554952 LRP5O75197 1615 aa16.47■□□□□ 0.23
PSMC6-207ENST00000554952 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.23
PSMC6-207ENST00000554952 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
PSMC6-207ENST00000554952 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
PSMC6-207ENST00000554952 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
PSMC6-207ENST00000554952 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
PSMC6-207ENST00000554952 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
PSMC6-207ENST00000554952 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms