RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 MYOM1P52179 1685 aa19.24■□□□□ 0.67
TUBB3-207ENST00000554927 AATKQ6ZMQ8 1374 aa19.23■□□□□ 0.67
TUBB3-207ENST00000554927 MARCH10Q8NA82 808 aaPredicted RBP19.23■□□□□ 0.67
TUBB3-207ENST00000554927 SYT17Q9BSW7 474 aa19.23■□□□□ 0.67
TUBB3-207ENST00000554927 TXNRD1Q16881 649 aa19.22■□□□□ 0.67
TUBB3-207ENST00000554927 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
TUBB3-207ENST00000554927 CSB-PGBD3P0DP91 1061 aa19.21■□□□□ 0.67
TUBB3-207ENST00000554927 SLC15A2Q16348 729 aa19.21■□□□□ 0.67
TUBB3-207ENST00000554927 CDCA7Q9BWT1 371 aaPredicted RBP19.21■□□□□ 0.67
TUBB3-207ENST00000554927 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
TUBB3-207ENST00000554927 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
TUBB3-207ENST00000554927 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
TUBB3-207ENST00000554927 SBF2Q86WG5 1849 aa19.19■□□□□ 0.66
TUBB3-207ENST00000554927 C1QTNF8P60827 252 aa19.19■□□□□ 0.66
TUBB3-207ENST00000554927 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
TUBB3-207ENST00000554927 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
TUBB3-207ENST00000554927 EXOC5O00471 708 aa19.17■□□□□ 0.66
TUBB3-207ENST00000554927 SOX12O15370 315 aa19.17■□□□□ 0.66
TUBB3-207ENST00000554927 ARXQ96QS3 562 aa19.16■□□□□ 0.66
TUBB3-207ENST00000554927 CENPJQ9HC77 1338 aaPredicted RBP19.16■□□□□ 0.66
TUBB3-207ENST00000554927 BCL9O00512 1426 aa19.16■□□□□ 0.66
TUBB3-207ENST00000554927 USP6P35125 1406 aa19.16■□□□□ 0.66
TUBB3-207ENST00000554927 SLIT3O75094 1523 aa19.15■□□□□ 0.66
TUBB3-207ENST00000554927 NBPF1Q3BBV0 1214 aa19.15■□□□□ 0.66
TUBB3-207ENST00000554927 CARD10Q9BWT7 1032 aa19.14■□□□□ 0.65
TUBB3-207ENST00000554927 GPR162Q16538 588 aa19.13■□□□□ 0.65
TUBB3-207ENST00000554927 CPSF1Q10570 1443 aaKnown RBP19.13■□□□□ 0.65
TUBB3-207ENST00000554927 AKAP12Q02952 1782 aa19.13■□□□□ 0.65
TUBB3-207ENST00000554927 KLHL34Q8N239 644 aa19.12■□□□□ 0.65
TUBB3-207ENST00000554927 ACSBG1Q96GR2 724 aa19.12■□□□□ 0.65
TUBB3-207ENST00000554927 SGIP1Q9BQI5 828 aa19.12■□□□□ 0.65
TUBB3-207ENST00000554927 ARHGEF25Q86VW2 580 aa19.11■□□□□ 0.65
TUBB3-207ENST00000554927 KCNH5Q8NCM2 988 aa19.11■□□□□ 0.65
TUBB3-207ENST00000554927 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
TUBB3-207ENST00000554927 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
TUBB3-207ENST00000554927 GIGYF1O75420 1035 aaPredicted RBP19.09■□□□□ 0.65
TUBB3-207ENST00000554927 COL18A1P39060 1754 aa19.09■□□□□ 0.65
TUBB3-207ENST00000554927 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
TUBB3-207ENST00000554927 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.64
TUBB3-207ENST00000554927 PIK3C2AO00443 1686 aa19.08■□□□□ 0.64
TUBB3-207ENST00000554927 UTRNP46939 3433 aa19.07■□□□□ 0.64
TUBB3-207ENST00000554927 IFFO2Q5TF58 517 aa19.07■□□□□ 0.64
TUBB3-207ENST00000554927 CHD4Q14839 1912 aa19.07■□□□□ 0.64
TUBB3-207ENST00000554927 TNS2Q63HR2 1409 aa19.07■□□□□ 0.64
TUBB3-207ENST00000554927 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
TUBB3-207ENST00000554927 TTC21BQ7Z4L5 1316 aa19.05■□□□□ 0.64
TUBB3-207ENST00000554927 QRICH2Q9H0J4 1663 aa19.05■□□□□ 0.64
TUBB3-207ENST00000554927 EVC2Q86UK5 1308 aa19.04■□□□□ 0.64
TUBB3-207ENST00000554927 POLD1P28340 1107 aa19.04■□□□□ 0.64
TUBB3-207ENST00000554927 ZNF827Q17R98 1081 aa19.04■□□□□ 0.64
TUBB3-207ENST00000554927 NLRP2Q9NX02 1062 aa19.04■□□□□ 0.64
TUBB3-207ENST00000554927 ZNF692Q9BU19 519 aaPredicted RBP19.03■□□□□ 0.64
TUBB3-207ENST00000554927 NHSQ6T4R5 1651 aa19.02■□□□□ 0.64
TUBB3-207ENST00000554927 TTC21AQ8NDW8 1320 aa19.01■□□□□ 0.63
TUBB3-207ENST00000554927 RGPD5Q99666 1765 aa19.01■□□□□ 0.63
TUBB3-207ENST00000554927 IL2RBP14784 551 aa19■□□□□ 0.63
TUBB3-207ENST00000554927 LRRC4BQ9NT99 713 aa19■□□□□ 0.63
TUBB3-207ENST00000554927 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
TUBB3-207ENST00000554927 PAPPAQ13219 1627 aa18.99■□□□□ 0.63
TUBB3-207ENST00000554927 ABCC6O95255 1503 aa18.99■□□□□ 0.63
TUBB3-207ENST00000554927 SLC16A10Q8TF71 515 aa18.98■□□□□ 0.63
TUBB3-207ENST00000554927 KTN1Q86UP2 1357 aaKnown RBP18.97■□□□□ 0.63
TUBB3-207ENST00000554927 NFAT5O94916 1531 aa18.97■□□□□ 0.63
TUBB3-207ENST00000554927 ERBB3P21860 1342 aa18.97■□□□□ 0.63
TUBB3-207ENST00000554927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
TUBB3-207ENST00000554927 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
TUBB3-207ENST00000554927 TFCP2L1Q9NZI6 479 aa18.96■□□□□ 0.63
TUBB3-207ENST00000554927 SLC27A3Q5K4L6 730 aa18.95■□□□□ 0.62
TUBB3-207ENST00000554927 NLGN2Q8NFZ4 835 aa18.95■□□□□ 0.62
TUBB3-207ENST00000554927 BTAF1O14981 1849 aa18.95■□□□□ 0.62
TUBB3-207ENST00000554927 ANKRD24Q8TF21 1146 aa18.94■□□□□ 0.62
TUBB3-207ENST00000554927 PNPLA7Q6ZV29 1317 aa18.94■□□□□ 0.62
TUBB3-207ENST00000554927 DDX54Q8TDD1 881 aaKnown RBP18.93■□□□□ 0.62
TUBB3-207ENST00000554927 SYTL4Q96C24 671 aaPredicted RBP18.93■□□□□ 0.62
TUBB3-207ENST00000554927 MSH5O43196 834 aa18.92■□□□□ 0.62
TUBB3-207ENST00000554927 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
TUBB3-207ENST00000554927 KCNQ4P56696 695 aa18.92■□□□□ 0.62
TUBB3-207ENST00000554927 KAT6BQ8WYB5 2073 aa18.9■□□□□ 0.62
TUBB3-207ENST00000554927 NME9Q86XW9 330 aa18.9■□□□□ 0.62
TUBB3-207ENST00000554927 YBX3P16989 372 aaKnown RBP eCLIP18.89■□□□□ 0.61
TUBB3-207ENST00000554927 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
TUBB3-207ENST00000554927 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
TUBB3-207ENST00000554927 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
TUBB3-207ENST00000554927 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
TUBB3-207ENST00000554927 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
TUBB3-207ENST00000554927 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
TUBB3-207ENST00000554927 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
TUBB3-207ENST00000554927 CEP350Q5VT06 3117 aa18.86■□□□□ 0.61
TUBB3-207ENST00000554927 ATP10DQ9P241 1426 aa18.85■□□□□ 0.61
TUBB3-207ENST00000554927 GPBP1L1Q9HC44 474 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-207ENST00000554927 MSL1Q68DK7 614 aa18.84■□□□□ 0.61
TUBB3-207ENST00000554927 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-207ENST00000554927 CCNL1Q9UK58 526 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-207ENST00000554927 QSER1Q2KHR3 1735 aa18.83■□□□□ 0.61
TUBB3-207ENST00000554927 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
TUBB3-207ENST00000554927 ZNF526Q8TF50 670 aaPredicted RBP18.82■□□□□ 0.6
TUBB3-207ENST00000554927 LTN1O94822 1766 aa18.82■□□□□ 0.6
TUBB3-207ENST00000554927 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
TUBB3-207ENST00000554927 GOLGB1Q14789 3259 aaKnown RBP18.81■□□□□ 0.6
TUBB3-207ENST00000554927 MON2Q7Z3U7 1717 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms