RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 PRDM11Q9NQV5 511 aa24.71■■□□□ 1.55
PPP4R3A-203ENST00000554511 KIF20BQ96Q89 1820 aa24.7■■□□□ 1.54
PPP4R3A-203ENST00000554511 CRYBG1Q9Y4K1 1723 aa24.69■■□□□ 1.54
PPP4R3A-203ENST00000554511 SF3B2Q13435 895 aaKnown RBP24.69■■□□□ 1.54
PPP4R3A-203ENST00000554511 PIK3C2AO00443 1686 aa24.69■■□□□ 1.54
PPP4R3A-203ENST00000554511 DEFB132Q7Z7B7 95 aa24.68■■□□□ 1.54
PPP4R3A-203ENST00000554511 SRCAPQ6ZRS2 3230 aa24.68■■□□□ 1.54
PPP4R3A-203ENST00000554511 OVOS2A0A0J9YW53 1432 aa24.68■■□□□ 1.54
PPP4R3A-203ENST00000554511 OVOS2Q6IE36 1432 aa24.68■■□□□ 1.54
PPP4R3A-203ENST00000554511 USP19O94966 1318 aa24.67■■□□□ 1.54
PPP4R3A-203ENST00000554511 GCP02774 474 aa24.67■■□□□ 1.54
PPP4R3A-203ENST00000554511 KIAA0232Q92628 1395 aa24.67■■□□□ 1.54
PPP4R3A-203ENST00000554511 SPATA31A5Q5VU36 1347 aa24.66■■□□□ 1.54
PPP4R3A-203ENST00000554511 SPATA31A7Q8IWB4 1347 aa24.66■■□□□ 1.54
PPP4R3A-203ENST00000554511 CHRNA2Q15822 529 aa24.65■■□□□ 1.54
PPP4R3A-203ENST00000554511 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.54
PPP4R3A-203ENST00000554511 PRKRIP1Q9H875 184 aaPredicted RBP24.64■■□□□ 1.54
PPP4R3A-203ENST00000554511 TNNT2P45379 298 aaPredicted RBP24.63■■□□□ 1.53
PPP4R3A-203ENST00000554511 USP54Q70EL1 1684 aa24.62■■□□□ 1.53
PPP4R3A-203ENST00000554511 SOX12O15370 315 aa24.62■■□□□ 1.53
PPP4R3A-203ENST00000554511 AATKQ6ZMQ8 1374 aa24.62■■□□□ 1.53
PPP4R3A-203ENST00000554511 PARD3Q8TEW0 1356 aa24.62■■□□□ 1.53
PPP4R3A-203ENST00000554511 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
PPP4R3A-203ENST00000554511 ANKRD26Q9UPS8 1709 aa24.61■■□□□ 1.53
PPP4R3A-203ENST00000554511 STRN4Q9NRL3 753 aa24.61■■□□□ 1.53
PPP4R3A-203ENST00000554511 SLIT3O75094 1523 aa24.6■■□□□ 1.53
PPP4R3A-203ENST00000554511 SPATA31A1Q5TZJ5 1347 aa24.59■■□□□ 1.53
PPP4R3A-203ENST00000554511 FAM182BQ5T319 152 aa24.58■■□□□ 1.53
PPP4R3A-203ENST00000554511 MYBBP1AQ9BQG0 1328 aaKnown RBP24.58■■□□□ 1.52
PPP4R3A-203ENST00000554511 AMPHP49418 695 aa24.57■■□□□ 1.52
PPP4R3A-203ENST00000554511 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
PPP4R3A-203ENST00000554511 BAG6P46379 1132 aa24.56■■□□□ 1.52
PPP4R3A-203ENST00000554511 CPDO75976 1380 aa24.55■■□□□ 1.52
PPP4R3A-203ENST00000554511 EVA1CP58658 441 aa24.55■■□□□ 1.52
PPP4R3A-203ENST00000554511 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
PPP4R3A-203ENST00000554511 KIF24Q5T7B8 1368 aa24.54■■□□□ 1.52
PPP4R3A-203ENST00000554511 THSD7AQ9UPZ6 1657 aa24.54■■□□□ 1.52
PPP4R3A-203ENST00000554511 ZBTB7CA1YPR0 619 aa24.54■■□□□ 1.52
PPP4R3A-203ENST00000554511 USP35Q9P2H5 1018 aa24.54■■□□□ 1.52
PPP4R3A-203ENST00000554511 POLKQ9UBT6 870 aa24.54■■□□□ 1.52
PPP4R3A-203ENST00000554511 PPM1GO15355 546 aaPredicted RBP24.53■■□□□ 1.52
PPP4R3A-203ENST00000554511 RRS1Q15050 365 aaKnown RBP24.53■■□□□ 1.52
PPP4R3A-203ENST00000554511 CFAP53Q96M91 514 aa24.53■■□□□ 1.52
PPP4R3A-203ENST00000554511 MAP3K19Q56UN5 1328 aa24.53■■□□□ 1.52
PPP4R3A-203ENST00000554511 FBLN1P23142 703 aa24.52■■□□□ 1.52
PPP4R3A-203ENST00000554511 MTHFSP49914 203 aa24.52■■□□□ 1.52
PPP4R3A-203ENST00000554511 NFAT5O94916 1531 aa24.51■■□□□ 1.51
PPP4R3A-203ENST00000554511 IP6K1Q92551 441 aa24.5■■□□□ 1.51
PPP4R3A-203ENST00000554511 CAMTA1Q9Y6Y1 1673 aa24.5■■□□□ 1.51
PPP4R3A-203ENST00000554511 LARP1Q6PKG0 1096 aaKnown RBP24.49■■□□□ 1.51
PPP4R3A-203ENST00000554511 EMILIN1Q9Y6C2 1016 aa24.49■■□□□ 1.51
PPP4R3A-203ENST00000554511 RTL1A6NKG5 1358 aa24.49■■□□□ 1.51
PPP4R3A-203ENST00000554511 FLT4P35916 1363 aa24.48■■□□□ 1.51
PPP4R3A-203ENST00000554511 EN1Q05925 392 aaPredicted RBP24.48■■□□□ 1.51
PPP4R3A-203ENST00000554511 BARGINQ6ZT62 677 aa24.48■■□□□ 1.51
PPP4R3A-203ENST00000554511 HOXC9P31274 260 aa24.46■■□□□ 1.51
PPP4R3A-203ENST00000554511 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
PPP4R3A-203ENST00000554511 MAP2P11137 1827 aaKnown RBP24.45■■□□□ 1.5
PPP4R3A-203ENST00000554511 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
PPP4R3A-203ENST00000554511 FAM196AQ6ZSG2 479 aa24.45■■□□□ 1.5
PPP4R3A-203ENST00000554511 TCP11L2Q8N4U5 519 aa24.45■■□□□ 1.5
PPP4R3A-203ENST00000554511 SMG6Q86US8 1419 aaKnown RBP24.44■■□□□ 1.5
PPP4R3A-203ENST00000554511 ABCC6O95255 1503 aa24.44■■□□□ 1.5
PPP4R3A-203ENST00000554511 PSDA5PKW4 1024 aaPredicted RBP24.43■■□□□ 1.5
PPP4R3A-203ENST00000554511 TRIM37O94972 964 aa24.43■■□□□ 1.5
PPP4R3A-203ENST00000554511 PDE3BQ13370 1112 aa24.43■■□□□ 1.5
PPP4R3A-203ENST00000554511 INSRP06213 1382 aa24.42■■□□□ 1.5
PPP4R3A-203ENST00000554511 CCER2I3L3R5 266 aa24.42■■□□□ 1.5
PPP4R3A-203ENST00000554511 HSP90AB2PQ58FF8 381 aa24.42■■□□□ 1.5
PPP4R3A-203ENST00000554511 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
PPP4R3A-203ENST00000554511 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
PPP4R3A-203ENST00000554511 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
PPP4R3A-203ENST00000554511 MIER1Q8N108 512 aa24.41■■□□□ 1.5
PPP4R3A-203ENST00000554511 THRAP3Q9Y2W1 955 aaKnown RBP24.41■■□□□ 1.5
PPP4R3A-203ENST00000554511 DISP2A7MBM2 1401 aa24.41■■□□□ 1.5
PPP4R3A-203ENST00000554511 LTN1O94822 1766 aa24.4■■□□□ 1.5
PPP4R3A-203ENST00000554511 EZH2Q15910 746 aaKnown RBP24.39■■□□□ 1.49
PPP4R3A-203ENST00000554511 AXIN2Q9Y2T1 843 aa24.39■■□□□ 1.49
PPP4R3A-203ENST00000554511 TNS1Q9HBL0 1735 aaKnown RBP24.38■■□□□ 1.49
PPP4R3A-203ENST00000554511 CSB-PGBD3P0DP91 1061 aa24.38■■□□□ 1.49
PPP4R3A-203ENST00000554511 ANKRD24Q8TF21 1146 aa24.38■■□□□ 1.49
PPP4R3A-203ENST00000554511 MRS2Q9HD23 443 aa24.38■■□□□ 1.49
PPP4R3A-203ENST00000554511 LTV1Q96GA3 475 aaPredicted RBP24.37■■□□□ 1.49
PPP4R3A-203ENST00000554511 CRB1P82279 1406 aa24.36■■□□□ 1.49
PPP4R3A-203ENST00000554511 APBA3O96018 575 aa24.36■■□□□ 1.49
PPP4R3A-203ENST00000554511 CAMKK2Q96RR4 588 aa24.36■■□□□ 1.49
PPP4R3A-203ENST00000554511 EIF4A2Q14240 407 aaKnown RBP24.34■■□□□ 1.49
PPP4R3A-203ENST00000554511 ERBB3P21860 1342 aa24.34■■□□□ 1.49
PPP4R3A-203ENST00000554511 R3HDM1Q15032 1099 aaKnown RBP24.33■■□□□ 1.49
PPP4R3A-203ENST00000554511 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
PPP4R3A-203ENST00000554511 COL18A1P39060 1754 aa24.33■■□□□ 1.49
PPP4R3A-203ENST00000554511 PEAK1Q9H792 1746 aa24.32■■□□□ 1.48
PPP4R3A-203ENST00000554511 IL13P35225 146 aa24.32■■□□□ 1.48
PPP4R3A-203ENST00000554511 WDR43Q15061 677 aaKnown RBP eCLIP24.32■■□□□ 1.48
PPP4R3A-203ENST00000554511 WDR17Q8IZU2 1322 aa24.32■■□□□ 1.48
PPP4R3A-203ENST00000554511 U2SURPO15042 1029 aaKnown RBP24.3■■□□□ 1.48
PPP4R3A-203ENST00000554511 NLRP2Q9NX02 1062 aa24.3■■□□□ 1.48
PPP4R3A-203ENST00000554511 LRP5O75197 1615 aa24.3■■□□□ 1.48
PPP4R3A-203ENST00000554511 PNNQ9H307 717 aaKnown RBP24.29■■□□□ 1.48
PPP4R3A-203ENST00000554511 PARP4Q9UKK3 1724 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms