RNA–Protein interactions for RNA: ENST00000554497.1

TMEM30B-201, Transcript of transmembrane protein 30B, humanhuman

TSL 4

Gene TMEM30B, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-201ENST00000554497 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
TMEM30B-201ENST00000554497 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
TMEM30B-201ENST00000554497 GPR162Q16538 588 aa18.3■□□□□ 0.52
TMEM30B-201ENST00000554497 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
TMEM30B-201ENST00000554497 TOPAZ1Q8N9V7 1692 aa18.29■□□□□ 0.52
TMEM30B-201ENST00000554497 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
TMEM30B-201ENST00000554497 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
TMEM30B-201ENST00000554497 BCL9O00512 1426 aa18.28■□□□□ 0.52
TMEM30B-201ENST00000554497 ACEP12821 1306 aa18.27■□□□□ 0.52
TMEM30B-201ENST00000554497 GCP02774 474 aa18.26■□□□□ 0.51
TMEM30B-201ENST00000554497 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
TMEM30B-201ENST00000554497 ARHGEF28Q8N1W1 1705 aaKnown RBP18.25■□□□□ 0.51
TMEM30B-201ENST00000554497 PAPPAQ13219 1627 aa18.23■□□□□ 0.51
TMEM30B-201ENST00000554497 ZBTB7CA1YPR0 619 aa18.23■□□□□ 0.51
TMEM30B-201ENST00000554497 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
TMEM30B-201ENST00000554497 PELP1Q8IZL8 1130 aaKnown RBP18.23■□□□□ 0.51
TMEM30B-201ENST00000554497 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
TMEM30B-201ENST00000554497 KLHL34Q8N239 644 aa18.21■□□□□ 0.51
TMEM30B-201ENST00000554497 CDK19Q9BWU1 502 aa18.21■□□□□ 0.51
TMEM30B-201ENST00000554497 COL18A1P39060 1754 aa18.21■□□□□ 0.51
TMEM30B-201ENST00000554497 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
TMEM30B-201ENST00000554497 PLEKHG3A1L390 1219 aa18.2■□□□□ 0.5
TMEM30B-201ENST00000554497 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
TMEM30B-201ENST00000554497 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
TMEM30B-201ENST00000554497 ZNF827Q17R98 1081 aa18.18■□□□□ 0.5
TMEM30B-201ENST00000554497 CDCA7Q9BWT1 371 aaPredicted RBP18.18■□□□□ 0.5
TMEM30B-201ENST00000554497 WDR17Q8IZU2 1322 aa18.18■□□□□ 0.5
TMEM30B-201ENST00000554497 COL24A1Q17RW2 1714 aa18.17■□□□□ 0.5
TMEM30B-201ENST00000554497 SLIT3O75094 1523 aa18.17■□□□□ 0.5
TMEM30B-201ENST00000554497 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
TMEM30B-201ENST00000554497 NLGN2Q8NFZ4 835 aa18.16■□□□□ 0.5
TMEM30B-201ENST00000554497 RGPD5Q99666 1765 aa18.15■□□□□ 0.5
TMEM30B-201ENST00000554497 HSPA6P17066 643 aa18.15■□□□□ 0.5
TMEM30B-201ENST00000554497 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
TMEM30B-201ENST00000554497 AXIN2Q9Y2T1 843 aa18.15■□□□□ 0.5
TMEM30B-201ENST00000554497 YBX3P16989 372 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM30B-201ENST00000554497 BTAF1O14981 1849 aa18.13■□□□□ 0.49
TMEM30B-201ENST00000554497 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
TMEM30B-201ENST00000554497 QSER1Q2KHR3 1735 aa18.12■□□□□ 0.49
TMEM30B-201ENST00000554497 EXOC5O00471 708 aa18.12■□□□□ 0.49
TMEM30B-201ENST00000554497 ACSBG1Q96GR2 724 aa18.12■□□□□ 0.49
TMEM30B-201ENST00000554497 TNS2Q63HR2 1409 aa18.12■□□□□ 0.49
TMEM30B-201ENST00000554497 POLD1P28340 1107 aa18.11■□□□□ 0.49
TMEM30B-201ENST00000554497 NLRP6P59044 892 aa18.11■□□□□ 0.49
TMEM30B-201ENST00000554497 CARD10Q9BWT7 1032 aa18.11■□□□□ 0.49
TMEM30B-201ENST00000554497 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
TMEM30B-201ENST00000554497 CPSF1Q10570 1443 aaKnown RBP18.11■□□□□ 0.49
TMEM30B-201ENST00000554497 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
TMEM30B-201ENST00000554497 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
TMEM30B-201ENST00000554497 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 GPBP1L1Q9HC44 474 aaPredicted RBP18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 TRPM1Q7Z4N2 1603 aa18.09■□□□□ 0.49
TMEM30B-201ENST00000554497 USP6P35125 1406 aa18.08■□□□□ 0.49
TMEM30B-201ENST00000554497 PNPLA7Q6ZV29 1317 aa18.08■□□□□ 0.49
TMEM30B-201ENST00000554497 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
TMEM30B-201ENST00000554497 PIK3C2AO00443 1686 aa18.08■□□□□ 0.48
TMEM30B-201ENST00000554497 ABCC6O95255 1503 aa18.07■□□□□ 0.48
TMEM30B-201ENST00000554497 ADCY9O60503 1353 aa18.05■□□□□ 0.48
TMEM30B-201ENST00000554497 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
TMEM30B-201ENST00000554497 ARHGEF25Q86VW2 580 aa18.05■□□□□ 0.48
TMEM30B-201ENST00000554497 ZNF526Q8TF50 670 aaPredicted RBP18.04■□□□□ 0.48
TMEM30B-201ENST00000554497 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
TMEM30B-201ENST00000554497 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
TMEM30B-201ENST00000554497 SOX12O15370 315 aa18.01■□□□□ 0.47
TMEM30B-201ENST00000554497 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
TMEM30B-201ENST00000554497 STAC3Q96MF2 364 aa18■□□□□ 0.47
TMEM30B-201ENST00000554497 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
TMEM30B-201ENST00000554497 TFCP2L1Q9NZI6 479 aa17.99■□□□□ 0.47
TMEM30B-201ENST00000554497 CABP1Q9NZU7 370 aa17.99■□□□□ 0.47
TMEM30B-201ENST00000554497 KCNQ4P56696 695 aa17.98■□□□□ 0.47
TMEM30B-201ENST00000554497 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
TMEM30B-201ENST00000554497 NFAT5O94916 1531 aa17.98■□□□□ 0.47
TMEM30B-201ENST00000554497 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
TMEM30B-201ENST00000554497 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
TMEM30B-201ENST00000554497 KIF3CO14782 793 aa17.96■□□□□ 0.47
TMEM30B-201ENST00000554497 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
TMEM30B-201ENST00000554497 IL2RBP14784 551 aa17.94■□□□□ 0.46
TMEM30B-201ENST00000554497 APLP1P51693 650 aa17.94■□□□□ 0.46
TMEM30B-201ENST00000554497 DNAJC5GQ8N7S2 189 aa17.94■□□□□ 0.46
TMEM30B-201ENST00000554497 KIAA1210Q9ULL0 1709 aa17.94■□□□□ 0.46
TMEM30B-201ENST00000554497 LY75O60449 1722 aa17.93■□□□□ 0.46
TMEM30B-201ENST00000554497 MSL1Q68DK7 614 aa17.93■□□□□ 0.46
TMEM30B-201ENST00000554497 NLRP2Q9NX02 1062 aa17.93■□□□□ 0.46
TMEM30B-201ENST00000554497 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
TMEM30B-201ENST00000554497 CAPN15O75808 1086 aa17.92■□□□□ 0.46
TMEM30B-201ENST00000554497 ERBB3P21860 1342 aa17.92■□□□□ 0.46
TMEM30B-201ENST00000554497 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
TMEM30B-201ENST00000554497 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
TMEM30B-201ENST00000554497 COL13A1Q5TAT6 717 aaPredicted RBP17.91■□□□□ 0.46
TMEM30B-201ENST00000554497 COL23A1Q86Y22 540 aaPredicted RBP17.91■□□□□ 0.46
TMEM30B-201ENST00000554497 MSH5O43196 834 aa17.9■□□□□ 0.46
TMEM30B-201ENST00000554497 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
TMEM30B-201ENST00000554497 CD2APQ9Y5K6 639 aa17.9■□□□□ 0.46
TMEM30B-201ENST00000554497 DOT1LQ8TEK3 1739 aa17.88■□□□□ 0.45
TMEM30B-201ENST00000554497 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
TMEM30B-201ENST00000554497 TTC21AQ8NDW8 1320 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms