RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 SH3BP2P78314 561 aa9.68□□□□□ -0.86
CHD8-207ENST00000554384 SRPK2P78362 688 aaKnown RBP9.68□□□□□ -0.86
CHD8-207ENST00000554384 AGERQ15109 404 aa9.68□□□□□ -0.86
CHD8-207ENST00000554384 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
CHD8-207ENST00000554384 ZNF511Q8NB15 262 aa9.68□□□□□ -0.86
CHD8-207ENST00000554384 CEP126Q9P2H0 1117 aa9.68□□□□□ -0.86
CHD8-207ENST00000554384 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
CHD8-207ENST00000554384 SH3RF1Q7Z6J0 888 aa9.67□□□□□ -0.86
CHD8-207ENST00000554384 AAASQ9NRG9 546 aa9.67□□□□□ -0.86
CHD8-207ENST00000554384 RPIAP49247 311 aa9.66□□□□□ -0.86
CHD8-207ENST00000554384 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
CHD8-207ENST00000554384 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
CHD8-207ENST00000554384 SKOR1P84550 965 aa9.65□□□□□ -0.86
CHD8-207ENST00000554384 ERFEQ4G0M1 354 aa9.65□□□□□ -0.86
CHD8-207ENST00000554384 ATP9BO43861 1147 aa9.64□□□□□ -0.87
CHD8-207ENST00000554384 SKIP12755 728 aa9.64□□□□□ -0.87
CHD8-207ENST00000554384 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
CHD8-207ENST00000554384 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
CHD8-207ENST00000554384 TOR4AQ9NXH8 423 aa9.64□□□□□ -0.87
CHD8-207ENST00000554384 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
CHD8-207ENST00000554384 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
CHD8-207ENST00000554384 TRIM32Q13049 653 aa9.63□□□□□ -0.87
CHD8-207ENST00000554384 BPHLQ86WA6 291 aaPredicted RBP9.63□□□□□ -0.87
CHD8-207ENST00000554384 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
CHD8-207ENST00000554384 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
CHD8-207ENST00000554384 ZBTB24O43167 697 aaPredicted RBP9.62□□□□□ -0.87
CHD8-207ENST00000554384 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
CHD8-207ENST00000554384 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
CHD8-207ENST00000554384 SLFNL1Q499Z3 407 aa9.61□□□□□ -0.87
CHD8-207ENST00000554384 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
CHD8-207ENST00000554384 PPP1R15AO75807 674 aaPredicted RBP9.6□□□□□ -0.87
CHD8-207ENST00000554384 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 USP17L5A8MUK1 530 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 AVPP01185 164 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 PDIA4P13667 645 aaKnown RBP9.59□□□□□ -0.87
CHD8-207ENST00000554384 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
CHD8-207ENST00000554384 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 CRIPAKQ8N1N5 446 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
CHD8-207ENST00000554384 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
CHD8-207ENST00000554384 ACIN1Q9UKV3 1341 aaKnown RBP9.58□□□□□ -0.88
CHD8-207ENST00000554384 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
CHD8-207ENST00000554384 CYP4X1Q8N118 509 aa9.58□□□□□ -0.88
CHD8-207ENST00000554384 RAB15P59190 212 aa9.57□□□□□ -0.88
CHD8-207ENST00000554384 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
CHD8-207ENST00000554384 NFATC2IPQ8NCF5 419 aa9.57□□□□□ -0.88
CHD8-207ENST00000554384 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
CHD8-207ENST00000554384 NCOA4Q13772 614 aa9.56□□□□□ -0.88
CHD8-207ENST00000554384 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
CHD8-207ENST00000554384 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
CHD8-207ENST00000554384 MCCD1P59942 119 aaPredicted RBP9.55□□□□□ -0.88
CHD8-207ENST00000554384 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
CHD8-207ENST00000554384 RC3H1Q5TC82 1133 aaKnown RBP9.55□□□□□ -0.88
CHD8-207ENST00000554384 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
CHD8-207ENST00000554384 CHIC2Q9UKJ5 165 aa9.55□□□□□ -0.88
CHD8-207ENST00000554384 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
CHD8-207ENST00000554384 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
CHD8-207ENST00000554384 AXIN1O15169 862 aa9.53□□□□□ -0.88
CHD8-207ENST00000554384 WNT7BP56706 349 aa9.53□□□□□ -0.88
CHD8-207ENST00000554384 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
CHD8-207ENST00000554384 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
CHD8-207ENST00000554384 PLEKHM2Q8IWE5 1019 aa9.53□□□□□ -0.88
CHD8-207ENST00000554384 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
CHD8-207ENST00000554384 EHBP1Q8NDI1 1231 aa9.53□□□□□ -0.88
CHD8-207ENST00000554384 WNT7AO00755 349 aa9.52□□□□□ -0.89
CHD8-207ENST00000554384 ATG7O95352 703 aa9.52□□□□□ -0.89
CHD8-207ENST00000554384 VARSP26640 1264 aaKnown RBP9.52□□□□□ -0.89
CHD8-207ENST00000554384 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.89
CHD8-207ENST00000554384 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
CHD8-207ENST00000554384 DOLKQ9UPQ8 538 aa9.52□□□□□ -0.89
CHD8-207ENST00000554384 TLL2Q9Y6L7 1015 aa9.52□□□□□ -0.89
CHD8-207ENST00000554384 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
CHD8-207ENST00000554384 ESPNB1AK53 854 aa9.51□□□□□ -0.89
CHD8-207ENST00000554384 SMPD1P17405 629 aa9.51□□□□□ -0.89
CHD8-207ENST00000554384 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
CHD8-207ENST00000554384 VASH1Q7L8A9 365 aaPredicted RBP9.51□□□□□ -0.89
CHD8-207ENST00000554384 TRAIPQ9BWF2 469 aa9.51□□□□□ -0.89
CHD8-207ENST00000554384 ZMIZ1Q9ULJ6 1067 aa9.51□□□□□ -0.89
CHD8-207ENST00000554384 PCDHB11Q9Y5F2 797 aa9.51□□□□□ -0.89
CHD8-207ENST00000554384 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
CHD8-207ENST00000554384 RASA1P20936 1047 aa9.5□□□□□ -0.89
CHD8-207ENST00000554384 CTC1Q2NKJ3 1217 aa9.5□□□□□ -0.89
CHD8-207ENST00000554384 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
CHD8-207ENST00000554384 ZNF592Q92610 1267 aa9.5□□□□□ -0.89
CHD8-207ENST00000554384 MRGPRX2Q96LB1 330 aa9.5□□□□□ -0.89
CHD8-207ENST00000554384 J3QL48 77 aa9.49□□□□□ -0.89
CHD8-207ENST00000554384 CLDN10P78369 228 aa9.49□□□□□ -0.89
CHD8-207ENST00000554384 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
CHD8-207ENST00000554384 INTS6LQ5JSJ4 861 aaKnown RBP9.49□□□□□ -0.89
CHD8-207ENST00000554384 C11orf95C9JLR9 678 aaPredicted RBP9.48□□□□□ -0.89
CHD8-207ENST00000554384 SIAH2O43255 324 aa9.48□□□□□ -0.89
CHD8-207ENST00000554384 GRM5P41594 1212 aa9.48□□□□□ -0.89
CHD8-207ENST00000554384 EML3Q32P44 896 aa9.48□□□□□ -0.89
CHD8-207ENST00000554384 NBPF20Q3BBV1 942 aa9.48□□□□□ -0.89
CHD8-207ENST00000554384 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
CHD8-207ENST00000554384 SNIP1Q8TAD8 396 aaKnown RBP9.48□□□□□ -0.89
CHD8-207ENST00000554384 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
CHD8-207ENST00000554384 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms