RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 BCL9O00512 1426 aa25.11■■□□□ 1.61
NEK9-204ENST00000554258 WNK3Q9BYP7 1800 aa25.1■■□□□ 1.61
NEK9-204ENST00000554258 AATKQ6ZMQ8 1374 aa25.1■■□□□ 1.61
NEK9-204ENST00000554258 TRAK1Q9UPV9 953 aa25.09■■□□□ 1.61
NEK9-204ENST00000554258 TOPAZ1Q8N9V7 1692 aa25.09■■□□□ 1.61
NEK9-204ENST00000554258 GRIN3BO60391 1043 aa25.07■■□□□ 1.6
NEK9-204ENST00000554258 ABTB2Q8N961 1025 aa25.07■■□□□ 1.6
NEK9-204ENST00000554258 POLD1P28340 1107 aa25.06■■□□□ 1.6
NEK9-204ENST00000554258 USP19O94966 1318 aa25.05■■□□□ 1.6
NEK9-204ENST00000554258 PAPPAQ13219 1627 aa25.04■■□□□ 1.6
NEK9-204ENST00000554258 ZBTB7CA1YPR0 619 aa25.04■■□□□ 1.6
NEK9-204ENST00000554258 TOM1L2Q6ZVM7 507 aa25.04■■□□□ 1.6
NEK9-204ENST00000554258 NLGN2Q8NFZ4 835 aa25.04■■□□□ 1.6
NEK9-204ENST00000554258 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
NEK9-204ENST00000554258 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
NEK9-204ENST00000554258 CAPN15O75808 1086 aa25.02■■□□□ 1.6
NEK9-204ENST00000554258 GCP02774 474 aa25.02■■□□□ 1.6
NEK9-204ENST00000554258 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
NEK9-204ENST00000554258 ZNF526Q8TF50 670 aaPredicted RBP25.01■■□□□ 1.59
NEK9-204ENST00000554258 CDCA7Q9BWT1 371 aaPredicted RBP25.01■■□□□ 1.59
NEK9-204ENST00000554258 ADGRB1O14514 1584 aa25.01■■□□□ 1.59
NEK9-204ENST00000554258 POLR3AO14802 1390 aaPredicted RBP24.99■■□□□ 1.59
NEK9-204ENST00000554258 ACEP12821 1306 aa24.99■■□□□ 1.59
NEK9-204ENST00000554258 COL24A1Q17RW2 1714 aa24.99■■□□□ 1.59
NEK9-204ENST00000554258 NLRP13Q86W25 1043 aa24.99■■□□□ 1.59
NEK9-204ENST00000554258 KAT6BQ8WYB5 2073 aa24.98■■□□□ 1.59
NEK9-204ENST00000554258 ZNF827Q17R98 1081 aa24.98■■□□□ 1.59
NEK9-204ENST00000554258 SLC16A10Q8TF71 515 aa24.98■■□□□ 1.59
NEK9-204ENST00000554258 NHSQ6T4R5 1651 aa24.97■■□□□ 1.59
NEK9-204ENST00000554258 QSER1Q2KHR3 1735 aa24.95■■□□□ 1.58
NEK9-204ENST00000554258 APLP1P51693 650 aa24.93■■□□□ 1.58
NEK9-204ENST00000554258 WDR17Q8IZU2 1322 aa24.92■■□□□ 1.58
NEK9-204ENST00000554258 EXOC5O00471 708 aa24.92■■□□□ 1.58
NEK9-204ENST00000554258 ADCY9O60503 1353 aa24.92■■□□□ 1.58
NEK9-204ENST00000554258 BTAF1O14981 1849 aa24.91■■□□□ 1.58
NEK9-204ENST00000554258 COL13A1Q5TAT6 717 aaPredicted RBP24.9■■□□□ 1.58
NEK9-204ENST00000554258 ACSBG1Q96GR2 724 aa24.9■■□□□ 1.58
NEK9-204ENST00000554258 CCDC61Q9Y6R9 512 aa24.89■■□□□ 1.58
NEK9-204ENST00000554258 COL18A1P39060 1754 aa24.89■■□□□ 1.57
NEK9-204ENST00000554258 BRD4O60885 1362 aaPredicted RBP24.89■■□□□ 1.57
NEK9-204ENST00000554258 CDK19Q9BWU1 502 aa24.88■■□□□ 1.57
NEK9-204ENST00000554258 PLEKHG3A1L390 1219 aa24.87■■□□□ 1.57
NEK9-204ENST00000554258 DNAJC5GQ8N7S2 189 aa24.87■■□□□ 1.57
NEK9-204ENST00000554258 MPHOSPH9Q99550 1183 aa24.87■■□□□ 1.57
NEK9-204ENST00000554258 LRRC4BQ9NT99 713 aa24.87■■□□□ 1.57
NEK9-204ENST00000554258 ARHGEF28Q8N1W1 1705 aaKnown RBP24.86■■□□□ 1.57
NEK9-204ENST00000554258 TUBGCP6Q96RT7 1819 aa24.86■■□□□ 1.57
NEK9-204ENST00000554258 AKT1S1Q96B36 256 aa24.86■■□□□ 1.57
NEK9-204ENST00000554258 PNPLA7Q6ZV29 1317 aa24.86■■□□□ 1.57
NEK9-204ENST00000554258 RGPD5Q99666 1765 aa24.85■■□□□ 1.57
NEK9-204ENST00000554258 PRELPP51888 382 aa24.85■■□□□ 1.57
NEK9-204ENST00000554258 TNS2Q63HR2 1409 aa24.85■■□□□ 1.57
NEK9-204ENST00000554258 TNS4Q8IZW8 715 aa24.84■■□□□ 1.57
NEK9-204ENST00000554258 CARD10Q9BWT7 1032 aa24.84■■□□□ 1.57
NEK9-204ENST00000554258 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
NEK9-204ENST00000554258 USP6P35125 1406 aa24.84■■□□□ 1.57
NEK9-204ENST00000554258 CSB-PGBD3P0DP91 1061 aa24.83■■□□□ 1.57
NEK9-204ENST00000554258 KIF3CO14782 793 aa24.82■■□□□ 1.56
NEK9-204ENST00000554258 TFCP2L1Q9NZI6 479 aa24.82■■□□□ 1.56
NEK9-204ENST00000554258 SLIT3O75094 1523 aa24.81■■□□□ 1.56
NEK9-204ENST00000554258 NLRP6P59044 892 aa24.81■■□□□ 1.56
NEK9-204ENST00000554258 PCNTO95613 3336 aa24.81■■□□□ 1.56
NEK9-204ENST00000554258 ABCC6O95255 1503 aa24.77■■□□□ 1.56
NEK9-204ENST00000554258 SLC27A3Q5K4L6 730 aa24.77■■□□□ 1.56
NEK9-204ENST00000554258 CPSF1Q10570 1443 aaKnown RBP24.77■■□□□ 1.56
NEK9-204ENST00000554258 TRPM1Q7Z4N2 1603 aa24.76■■□□□ 1.55
NEK9-204ENST00000554258 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
NEK9-204ENST00000554258 WDR90Q96KV7 1748 aa24.75■■□□□ 1.55
NEK9-204ENST00000554258 PPIP5K1Q6PFW1 1433 aa24.74■■□□□ 1.55
NEK9-204ENST00000554258 MSH5O43196 834 aa24.72■■□□□ 1.55
NEK9-204ENST00000554258 SLC34A2O95436 690 aa24.72■■□□□ 1.55
NEK9-204ENST00000554258 KDM2AQ9Y2K7 1162 aa24.71■■□□□ 1.55
NEK9-204ENST00000554258 TOMM70O94826 608 aa24.7■■□□□ 1.54
NEK9-204ENST00000554258 CD2APQ9Y5K6 639 aa24.7■■□□□ 1.54
NEK9-204ENST00000554258 ARHGEF25Q86VW2 580 aa24.69■■□□□ 1.54
NEK9-204ENST00000554258 PIK3C2AO00443 1686 aa24.69■■□□□ 1.54
NEK9-204ENST00000554258 KCNQ4P56696 695 aa24.68■■□□□ 1.54
NEK9-204ENST00000554258 KLRG1Q96E93 195 aa24.68■■□□□ 1.54
NEK9-204ENST00000554258 MSL1Q68DK7 614 aa24.67■■□□□ 1.54
NEK9-204ENST00000554258 JMYQ8N9B5 988 aa24.67■■□□□ 1.54
NEK9-204ENST00000554258 SRPK2P78362 688 aaKnown RBP24.66■■□□□ 1.54
NEK9-204ENST00000554258 SOX12O15370 315 aa24.65■■□□□ 1.54
NEK9-204ENST00000554258 DCAF11Q8TEB1 546 aa24.64■■□□□ 1.54
NEK9-204ENST00000554258 COL23A1Q86Y22 540 aaPredicted RBP24.63■■□□□ 1.53
NEK9-204ENST00000554258 KCNH5Q8NCM2 988 aa24.63■■□□□ 1.53
NEK9-204ENST00000554258 HTRA3P83110 453 aa24.62■■□□□ 1.53
NEK9-204ENST00000554258 WWC3Q9ULE0 1092 aa24.62■■□□□ 1.53
NEK9-204ENST00000554258 LY75O60449 1722 aa24.61■■□□□ 1.53
NEK9-204ENST00000554258 IL2RBP14784 551 aa24.61■■□□□ 1.53
NEK9-204ENST00000554258 QRICH2Q9H0J4 1663 aa24.61■■□□□ 1.53
NEK9-204ENST00000554258 NLRP2Q9NX02 1062 aa24.59■■□□□ 1.53
NEK9-204ENST00000554258 IGSF1Q8N6C5 1336 aa24.59■■□□□ 1.53
NEK9-204ENST00000554258 CABP2Q9NPB3 220 aa24.58■■□□□ 1.53
NEK9-204ENST00000554258 SYTL4Q96C24 671 aaPredicted RBP24.56■■□□□ 1.52
NEK9-204ENST00000554258 CABP1Q9NZU7 370 aa24.56■■□□□ 1.52
NEK9-204ENST00000554258 CCNL1Q9UK58 526 aaPredicted RBP24.55■■□□□ 1.52
NEK9-204ENST00000554258 STAC3Q96MF2 364 aa24.54■■□□□ 1.52
NEK9-204ENST00000554258 NFAT5O94916 1531 aa24.54■■□□□ 1.52
NEK9-204ENST00000554258 RBM46Q8TBY0 533 aaKnown RBP24.53■■□□□ 1.52
NEK9-204ENST00000554258 NMRK2Q9NPI5 230 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms