RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
TDP1-209ENST00000554180 IP6K1Q92551 441 aa10.16□□□□□ -0.78
TDP1-209ENST00000554180 COL16A1Q07092 1604 aaPredicted RBP10.15□□□□□ -0.78
TDP1-209ENST00000554180 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
TDP1-209ENST00000554180 FCHSD2O94868 740 aa10.15□□□□□ -0.78
TDP1-209ENST00000554180 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
TDP1-209ENST00000554180 NCBP3Q53F19 620 aaKnown RBP10.15□□□□□ -0.78
TDP1-209ENST00000554180 HSP90AB2PQ58FF8 381 aa10.15□□□□□ -0.78
TDP1-209ENST00000554180 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.79
TDP1-209ENST00000554180 LTN1O94822 1766 aa10.14□□□□□ -0.79
TDP1-209ENST00000554180 RUNDC1Q96C34 613 aa10.14□□□□□ -0.79
TDP1-209ENST00000554180 KDRP35968 1356 aa10.14□□□□□ -0.79
TDP1-209ENST00000554180 PHLPP1O60346 1717 aa10.13□□□□□ -0.79
TDP1-209ENST00000554180 RGPD1P0DJD0 1748 aa10.13□□□□□ -0.79
TDP1-209ENST00000554180 ABCA3Q99758 1704 aa10.13□□□□□ -0.79
TDP1-209ENST00000554180 IGSF1Q8N6C5 1336 aa10.13□□□□□ -0.79
TDP1-209ENST00000554180 PIP4K2BP78356 416 aa10.12□□□□□ -0.79
TDP1-209ENST00000554180 CABLES1Q8TDN4 633 aa10.12□□□□□ -0.79
TDP1-209ENST00000554180 PLEKHF1Q96S99 279 aa10.12□□□□□ -0.79
TDP1-209ENST00000554180 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
TDP1-209ENST00000554180 KIAA0232Q92628 1395 aa10.12□□□□□ -0.79
TDP1-209ENST00000554180 ERBB3P21860 1342 aa10.11□□□□□ -0.79
TDP1-209ENST00000554180 MAPK8IP3Q9UPT6 1336 aa10.11□□□□□ -0.79
TDP1-209ENST00000554180 NCAPD2Q15021 1401 aa10.11□□□□□ -0.79
TDP1-209ENST00000554180 NEFMP07197 916 aa10.11□□□□□ -0.79
TDP1-209ENST00000554180 HAP1P54257 671 aaPredicted RBP10.11□□□□□ -0.79
TDP1-209ENST00000554180 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
TDP1-209ENST00000554180 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
TDP1-209ENST00000554180 PRKAR2BP31323 418 aa10.1□□□□□ -0.79
TDP1-209ENST00000554180 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
TDP1-209ENST00000554180 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
TDP1-209ENST00000554180 CCDC146Q8IYE0 955 aa10.1□□□□□ -0.79
TDP1-209ENST00000554180 EYA1Q99502 592 aa10.1□□□□□ -0.79
TDP1-209ENST00000554180 PRDM11Q9NQV5 511 aa10.1□□□□□ -0.79
TDP1-209ENST00000554180 CAMTA1Q9Y6Y1 1673 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 COL18A1P39060 1754 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 APAF1O14727 1248 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 SULT6B1Q6IMI4 303 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 ANKRD24Q8TF21 1146 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 JCADQ9P266 1359 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 LMO7Q8WWI1 1683 aa10.09□□□□□ -0.79
TDP1-209ENST00000554180 FAM208AQ9UK61 1670 aaKnown RBP10.09□□□□□ -0.79
TDP1-209ENST00000554180 ZNF521Q96K83 1311 aa10.08□□□□□ -0.8
TDP1-209ENST00000554180 ZBTB7CA1YPR0 619 aa10.08□□□□□ -0.8
TDP1-209ENST00000554180 PLEKHG5O94827 1062 aa10.08□□□□□ -0.8
TDP1-209ENST00000554180 HMOX1P09601 288 aa10.08□□□□□ -0.8
TDP1-209ENST00000554180 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
TDP1-209ENST00000554180 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
TDP1-209ENST00000554180 COL5A2P05997 1499 aaPredicted RBP10.06□□□□□ -0.8
TDP1-209ENST00000554180 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
TDP1-209ENST00000554180 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
TDP1-209ENST00000554180 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
TDP1-209ENST00000554180 LTV1Q96GA3 475 aaPredicted RBP10.06□□□□□ -0.8
TDP1-209ENST00000554180 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
TDP1-209ENST00000554180 COL14A1Q05707 1796 aaKnown RBP10.06□□□□□ -0.8
TDP1-209ENST00000554180 SPATA31A6Q5VVP1 1343 aa10.06□□□□□ -0.8
TDP1-209ENST00000554180 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
TDP1-209ENST00000554180 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
TDP1-209ENST00000554180 CHRNA2Q15822 529 aa10.05□□□□□ -0.8
TDP1-209ENST00000554180 WWC1Q8IX03 1113 aa10.05□□□□□ -0.8
TDP1-209ENST00000554180 PHACTR3Q96KR7 559 aa10.05□□□□□ -0.8
TDP1-209ENST00000554180 FAM83GA6ND36 823 aa10.04□□□□□ -0.8
TDP1-209ENST00000554180 GOLGA2Q08379 1002 aa10.04□□□□□ -0.8
TDP1-209ENST00000554180 WDR63Q8IWG1 891 aa10.04□□□□□ -0.8
TDP1-209ENST00000554180 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
TDP1-209ENST00000554180 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
TDP1-209ENST00000554180 RIPK4P57078 832 aa10.03□□□□□ -0.8
TDP1-209ENST00000554180 CALD1Q05682 793 aaKnown RBP10.03□□□□□ -0.8
TDP1-209ENST00000554180 AMOTQ4VCS5 1084 aa10.03□□□□□ -0.8
TDP1-209ENST00000554180 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
TDP1-209ENST00000554180 RRP7AQ9Y3A4 280 aaKnown RBP10.03□□□□□ -0.8
TDP1-209ENST00000554180 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
TDP1-209ENST00000554180 IL16Q14005 1332 aa10.03□□□□□ -0.8
TDP1-209ENST00000554180 CRB1P82279 1406 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 E9PSI1 815 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
TDP1-209ENST00000554180 HSPA1LP34931 641 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 NEUROD2Q15784 382 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 USHBP1Q8N6Y0 703 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 CARD10Q9BWT7 1032 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.817e-6■■□□□ 12.8
TDP1-209ENST00000554180 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.81
TDP1-209ENST00000554180 RGPD5Q99666 1765 aa10.01□□□□□ -0.81
TDP1-209ENST00000554180 TOM1L2Q6ZVM7 507 aa10.01□□□□□ -0.81
TDP1-209ENST00000554180 RAPGEF4Q8WZA2 1011 aa10.01□□□□□ -0.81
TDP1-209ENST00000554180 BTG4Q9NY30 223 aa10.01□□□□□ -0.81
TDP1-209ENST00000554180 SLIT2O94813 1529 aa10.01□□□□□ -0.81
TDP1-209ENST00000554180 NWD2Q9ULI1 1742 aa10□□□□□ -0.81
TDP1-209ENST00000554180 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
TDP1-209ENST00000554180 EVA1CP58658 441 aa10□□□□□ -0.81
TDP1-209ENST00000554180 SLFN5Q08AF3 891 aa10□□□□□ -0.81
TDP1-209ENST00000554180 MTHFSDQ2M296 383 aaKnown RBP10□□□□□ -0.81
TDP1-209ENST00000554180 PLEKHO1Q53GL0 409 aaPredicted RBP10□□□□□ -0.81
TDP1-209ENST00000554180 TRMT2AQ8IZ69 625 aaKnown RBP10□□□□□ -0.81
TDP1-209ENST00000554180 MAP3K5Q99683 1374 aa10□□□□□ -0.81
TDP1-209ENST00000554180 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
TDP1-209ENST00000554180 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
TDP1-209ENST00000554180 RGPD2P0DJD1 1756 aa9.99□□□□□ -0.81
TDP1-209ENST00000554180 MEGF6O75095 1541 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms