RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
XRCC3-206ENST00000554170 PIK3C2AO00443 1686 aa18.05■□□□□ 0.48
XRCC3-206ENST00000554170 USP6P35125 1406 aa18.05■□□□□ 0.48
XRCC3-206ENST00000554170 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
XRCC3-206ENST00000554170 RGPD5Q99666 1765 aa18.04■□□□□ 0.48
XRCC3-206ENST00000554170 YY1P25490 414 aa18.04■□□□□ 0.48
XRCC3-206ENST00000554170 CABP2Q9NPB3 220 aa18.04■□□□□ 0.48
XRCC3-206ENST00000554170 AATKQ6ZMQ8 1374 aa18.04■□□□□ 0.48
XRCC3-206ENST00000554170 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
XRCC3-206ENST00000554170 KCNQ2O43526 872 aa18.03■□□□□ 0.48
XRCC3-206ENST00000554170 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-206ENST00000554170 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
XRCC3-206ENST00000554170 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
XRCC3-206ENST00000554170 PLSCR1O15162 318 aa18.02■□□□□ 0.48
XRCC3-206ENST00000554170 ZBTB7CA1YPR0 619 aa18.01■□□□□ 0.47
XRCC3-206ENST00000554170 NLRP6P59044 892 aa18.01■□□□□ 0.47
XRCC3-206ENST00000554170 USP47Q96K76 1375 aa18.01■□□□□ 0.47
XRCC3-206ENST00000554170 DDB1Q16531 1140 aa18■□□□□ 0.47
XRCC3-206ENST00000554170 CABP1Q9NZU7 370 aa18■□□□□ 0.47
XRCC3-206ENST00000554170 TOM1L2Q6ZVM7 507 aa17.99■□□□□ 0.47
XRCC3-206ENST00000554170 BCL11BQ9C0K0 894 aaPredicted RBP17.98■□□□□ 0.47
XRCC3-206ENST00000554170 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
XRCC3-206ENST00000554170 BCL9O00512 1426 aa17.98■□□□□ 0.47
XRCC3-206ENST00000554170 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
XRCC3-206ENST00000554170 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
XRCC3-206ENST00000554170 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
XRCC3-206ENST00000554170 PTF1AQ7RTS3 328 aa17.97■□□□□ 0.47
XRCC3-206ENST00000554170 CDCA7Q9BWT1 371 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-206ENST00000554170 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
XRCC3-206ENST00000554170 TMF1P82094 1093 aa17.95■□□□□ 0.46
XRCC3-206ENST00000554170 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-206ENST00000554170 TESK2Q96S53 571 aa17.95■□□□□ 0.46
XRCC3-206ENST00000554170 MYOM1P52179 1685 aa17.95■□□□□ 0.46
XRCC3-206ENST00000554170 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
XRCC3-206ENST00000554170 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
XRCC3-206ENST00000554170 ARHGEF25Q86VW2 580 aa17.93■□□□□ 0.46
XRCC3-206ENST00000554170 PROM2Q8N271 834 aa17.93■□□□□ 0.46
XRCC3-206ENST00000554170 PDGFDQ9GZP0 370 aaPredicted RBP17.93■□□□□ 0.46
XRCC3-206ENST00000554170 KAT6BQ8WYB5 2073 aa17.93■□□□□ 0.46
XRCC3-206ENST00000554170 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
XRCC3-206ENST00000554170 NFAT5O94916 1531 aa17.92■□□□□ 0.46
XRCC3-206ENST00000554170 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
XRCC3-206ENST00000554170 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
XRCC3-206ENST00000554170 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
XRCC3-206ENST00000554170 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
XRCC3-206ENST00000554170 ABCC6O95255 1503 aa17.91■□□□□ 0.46
XRCC3-206ENST00000554170 CHD4Q14839 1912 aa17.9■□□□□ 0.46
XRCC3-206ENST00000554170 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
XRCC3-206ENST00000554170 TTC21BQ7Z4L5 1316 aa17.9■□□□□ 0.46
XRCC3-206ENST00000554170 NHSQ6T4R5 1651 aa17.9■□□□□ 0.46
XRCC3-206ENST00000554170 UTRNP46939 3433 aa17.89■□□□□ 0.46
XRCC3-206ENST00000554170 MON2Q7Z3U7 1717 aa17.89■□□□□ 0.46
XRCC3-206ENST00000554170 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.45
XRCC3-206ENST00000554170 PTGER2P43116 358 aa17.89■□□□□ 0.45
XRCC3-206ENST00000554170 TTC21AQ8NDW8 1320 aa17.89■□□□□ 0.45
XRCC3-206ENST00000554170 SOX12O15370 315 aa17.88■□□□□ 0.45
XRCC3-206ENST00000554170 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
XRCC3-206ENST00000554170 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
XRCC3-206ENST00000554170 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
XRCC3-206ENST00000554170 CCDC7Q96M83 1385 aa17.88■□□□□ 0.45
XRCC3-206ENST00000554170 TNS2Q63HR2 1409 aa17.88■□□□□ 0.45
XRCC3-206ENST00000554170 USP54Q70EL1 1684 aa17.87■□□□□ 0.45
XRCC3-206ENST00000554170 LTN1O94822 1766 aa17.87■□□□□ 0.45
XRCC3-206ENST00000554170 EXOC5O00471 708 aa17.87■□□□□ 0.45
XRCC3-206ENST00000554170 HDGFL2Q7Z4V5 671 aaPredicted RBP17.87■□□□□ 0.45
XRCC3-206ENST00000554170 SLC15A2Q16348 729 aa17.86■□□□□ 0.45
XRCC3-206ENST00000554170 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
XRCC3-206ENST00000554170 BTAF1O14981 1849 aa17.85■□□□□ 0.45
XRCC3-206ENST00000554170 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
XRCC3-206ENST00000554170 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
XRCC3-206ENST00000554170 PAPPAQ13219 1627 aa17.84■□□□□ 0.45
XRCC3-206ENST00000554170 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
XRCC3-206ENST00000554170 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
XRCC3-206ENST00000554170 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
XRCC3-206ENST00000554170 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
XRCC3-206ENST00000554170 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
XRCC3-206ENST00000554170 ERBB3P21860 1342 aa17.8■□□□□ 0.44
XRCC3-206ENST00000554170 ZNF784Q8NCA9 323 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-206ENST00000554170 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
XRCC3-206ENST00000554170 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
XRCC3-206ENST00000554170 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
XRCC3-206ENST00000554170 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
XRCC3-206ENST00000554170 CD163L1Q9NR16 1453 aa17.77■□□□□ 0.44
XRCC3-206ENST00000554170 IL2RBP14784 551 aa17.77■□□□□ 0.44
XRCC3-206ENST00000554170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
XRCC3-206ENST00000554170 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
XRCC3-206ENST00000554170 A0A1W2PP64 1363 aa17.77■□□□□ 0.43
XRCC3-206ENST00000554170 ANKRD36BQ8N2N9 1353 aa17.76■□□□□ 0.43
XRCC3-206ENST00000554170 EDC4Q6P2E9 1401 aaKnown RBP17.75■□□□□ 0.43
XRCC3-206ENST00000554170 FAM208AQ9UK61 1670 aaKnown RBP17.75■□□□□ 0.43
XRCC3-206ENST00000554170 ARXQ96QS3 562 aa17.75■□□□□ 0.43
XRCC3-206ENST00000554170 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
XRCC3-206ENST00000554170 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
XRCC3-206ENST00000554170 NME9Q86XW9 330 aa17.74■□□□□ 0.43
XRCC3-206ENST00000554170 TUBGCP6Q96RT7 1819 aa17.74■□□□□ 0.43
XRCC3-206ENST00000554170 ZNF827Q17R98 1081 aa17.73■□□□□ 0.43
XRCC3-206ENST00000554170 ANKRD24Q8TF21 1146 aa17.73■□□□□ 0.43
XRCC3-206ENST00000554170 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
XRCC3-206ENST00000554170 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-206ENST00000554170 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms