RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 AMPHP49418 695 aa19.5■□□□□ 0.71
SV2B-204ENST00000553727 MORC1Q86VD1 984 aa19.5■□□□□ 0.71
SV2B-204ENST00000553727 MAP3K19Q56UN5 1328 aa19.5■□□□□ 0.71
SV2B-204ENST00000553727 NWD2Q9ULI1 1742 aa19.49■□□□□ 0.71
SV2B-204ENST00000553727 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
SV2B-204ENST00000553727 AMER1Q5JTC6 1135 aaPredicted RBP19.49■□□□□ 0.71
SV2B-204ENST00000553727 CC2D1BQ5T0F9 858 aaKnown RBP19.49■□□□□ 0.71
SV2B-204ENST00000553727 LARP1Q6PKG0 1096 aaKnown RBP19.49■□□□□ 0.71
SV2B-204ENST00000553727 NSD2O96028 1365 aa19.48■□□□□ 0.71
SV2B-204ENST00000553727 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
SV2B-204ENST00000553727 PPM1GO15355 546 aaPredicted RBP19.47■□□□□ 0.71
SV2B-204ENST00000553727 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
SV2B-204ENST00000553727 IP6K1Q92551 441 aa19.47■□□□□ 0.71
SV2B-204ENST00000553727 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
SV2B-204ENST00000553727 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
SV2B-204ENST00000553727 COL5A2P05997 1499 aaPredicted RBP19.46■□□□□ 0.71
SV2B-204ENST00000553727 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.71
SV2B-204ENST00000553727 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.71
SV2B-204ENST00000553727 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
SV2B-204ENST00000553727 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
SV2B-204ENST00000553727 HOXC9P31274 260 aa19.45■□□□□ 0.7
SV2B-204ENST00000553727 LTV1Q96GA3 475 aaPredicted RBP19.45■□□□□ 0.7
SV2B-204ENST00000553727 EMILIN1Q9Y6C2 1016 aa19.45■□□□□ 0.7
SV2B-204ENST00000553727 A0A0G2JS52 829 aa19.44■□□□□ 0.7
SV2B-204ENST00000553727 MYT1Q01538 1121 aa19.44■□□□□ 0.7
SV2B-204ENST00000553727 FAM98CQ17RN3 349 aaKnown RBP19.44■□□□□ 0.7
SV2B-204ENST00000553727 ANKRD24Q8TF21 1146 aa19.44■□□□□ 0.7
SV2B-204ENST00000553727 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
SV2B-204ENST00000553727 COL18A1P39060 1754 aa19.43■□□□□ 0.7
SV2B-204ENST00000553727 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
SV2B-204ENST00000553727 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
SV2B-204ENST00000553727 POLKQ9UBT6 870 aa19.42■□□□□ 0.7
SV2B-204ENST00000553727 LTN1O94822 1766 aa19.42■□□□□ 0.7
SV2B-204ENST00000553727 NLRP2Q9NX02 1062 aa19.41■□□□□ 0.7
SV2B-204ENST00000553727 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
SV2B-204ENST00000553727 CRB1P82279 1406 aa19.41■□□□□ 0.7
SV2B-204ENST00000553727 GLI3P10071 1580 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 SEPT12Q8IYM1 358 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 TCP11L2Q8N4U5 519 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 ERBB3P21860 1342 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 RTL1A6NKG5 1358 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 ABCC6O95255 1503 aa19.4■□□□□ 0.7
SV2B-204ENST00000553727 FLT4P35916 1363 aa19.39■□□□□ 0.69
SV2B-204ENST00000553727 NPC1L1Q9UHC9 1359 aa19.39■□□□□ 0.69
SV2B-204ENST00000553727 RGS12O14924 1447 aa19.39■□□□□ 0.69
SV2B-204ENST00000553727 CDK12Q9NYV4 1490 aaPredicted RBP19.39■□□□□ 0.69
SV2B-204ENST00000553727 CARD10Q9BWT7 1032 aa19.38■□□□□ 0.69
SV2B-204ENST00000553727 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
SV2B-204ENST00000553727 RGPD5Q99666 1765 aa19.37■□□□□ 0.69
SV2B-204ENST00000553727 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
SV2B-204ENST00000553727 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
SV2B-204ENST00000553727 THRAP3Q9Y2W1 955 aaKnown RBP19.37■□□□□ 0.69
SV2B-204ENST00000553727 INSRP06213 1382 aa19.36■□□□□ 0.69
SV2B-204ENST00000553727 BARGINQ6ZT62 677 aa19.36■□□□□ 0.69
SV2B-204ENST00000553727 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
SV2B-204ENST00000553727 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
SV2B-204ENST00000553727 MTHFSP49914 203 aa19.33■□□□□ 0.68
SV2B-204ENST00000553727 MAP2P11137 1827 aaKnown RBP19.31■□□□□ 0.68
SV2B-204ENST00000553727 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
SV2B-204ENST00000553727 USHBP1Q8N6Y0 703 aa19.31■□□□□ 0.68
SV2B-204ENST00000553727 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
SV2B-204ENST00000553727 KRT27Q7Z3Y8 459 aa19.3■□□□□ 0.68
SV2B-204ENST00000553727 PDE3BQ13370 1112 aa19.29■□□□□ 0.68
SV2B-204ENST00000553727 EIF4A2Q14240 407 aaKnown RBP19.29■□□□□ 0.68
SV2B-204ENST00000553727 CDCA7Q9BWT1 371 aaPredicted RBP19.29■□□□□ 0.68
SV2B-204ENST00000553727 IL2RBP14784 551 aa19.28■□□□□ 0.68
SV2B-204ENST00000553727 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
SV2B-204ENST00000553727 DDB1Q16531 1140 aa19.27■□□□□ 0.68
SV2B-204ENST00000553727 EXOC5O00471 708 aa19.26■□□□□ 0.67
SV2B-204ENST00000553727 FAM182BQ5T319 152 aa19.26■□□□□ 0.67
SV2B-204ENST00000553727 EYA1Q99502 592 aa19.26■□□□□ 0.67
SV2B-204ENST00000553727 THSD7AQ9UPZ6 1657 aa19.25■□□□□ 0.67
SV2B-204ENST00000553727 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
SV2B-204ENST00000553727 DISP2A7MBM2 1401 aa19.24■□□□□ 0.67
SV2B-204ENST00000553727 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
SV2B-204ENST00000553727 FAM208AQ9UK61 1670 aaKnown RBP19.23■□□□□ 0.67
SV2B-204ENST00000553727 PARD3Q8TEW0 1356 aa19.22■□□□□ 0.67
SV2B-204ENST00000553727 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
SV2B-204ENST00000553727 IL13P35225 146 aa19.22■□□□□ 0.67
SV2B-204ENST00000553727 RALBP1Q15311 655 aa19.22■□□□□ 0.67
SV2B-204ENST00000553727 TATP17735 454 aaPredicted RBP19.21■□□□□ 0.67
SV2B-204ENST00000553727 RGPD2P0DJD1 1756 aa19.21■□□□□ 0.67
SV2B-204ENST00000553727 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
SV2B-204ENST00000553727 DDX54Q8TDD1 881 aaKnown RBP19.19■□□□□ 0.66
SV2B-204ENST00000553727 U2SURPO15042 1029 aaKnown RBP19.18■□□□□ 0.66
SV2B-204ENST00000553727 FAM196AQ6ZSG2 479 aa19.18■□□□□ 0.66
SV2B-204ENST00000553727 MARCH10Q8NA82 808 aaPredicted RBP19.18■□□□□ 0.66
SV2B-204ENST00000553727 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
SV2B-204ENST00000553727 UPF1Q92900 1129 aaKnown RBP eCLIP19.18■□□□□ 0.66
SV2B-204ENST00000553727 MEGF6O75095 1541 aa19.18■□□□□ 0.66
SV2B-204ENST00000553727 IGSF1Q8N6C5 1336 aa19.18■□□□□ 0.66
SV2B-204ENST00000553727 PARP4Q9UKK3 1724 aaKnown RBP19.17■□□□□ 0.66
SV2B-204ENST00000553727 SULT6B1Q6IMI4 303 aa19.17■□□□□ 0.66
SV2B-204ENST00000553727 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
SV2B-204ENST00000553727 LRRC37A3O60309 1634 aa19.16■□□□□ 0.66
SV2B-204ENST00000553727 AEBP1Q8IUX7 1158 aa19.16■□□□□ 0.66
SV2B-204ENST00000553727 PRKRIP1Q9H875 184 aaPredicted RBP19.16■□□□□ 0.66
SV2B-204ENST00000553727 HMOX1P09601 288 aa19.15■□□□□ 0.66
SV2B-204ENST00000553727 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms