RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ARMC2Q8NEN0 867 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 ZNF592Q92610 1267 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 NUDT12Q9BQG2 462 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 TLL1O43897 1013 aa6.62□□□□□ -1.35
TDP1-207ENST00000553617 LZTS3O60299 673 aaPredicted RBP6.62□□□□□ -1.35
TDP1-207ENST00000553617 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
TDP1-207ENST00000553617 PTK7Q13308 1070 aa6.62□□□□□ -1.35
TDP1-207ENST00000553617 CCDC27Q2M243 656 aa6.62□□□□□ -1.35
TDP1-207ENST00000553617 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
TDP1-207ENST00000553617 SLAIN2Q9P270 581 aa6.62□□□□□ -1.35
TDP1-207ENST00000553617 MKRN1Q9UHC7 482 aaKnown RBP6.62□□□□□ -1.35
TDP1-207ENST00000553617 COPS2P61201 443 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 NCOA4Q13772 614 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 SLFNL1Q499Z3 407 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 NBPF14Q5TI25 921 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 TRAF7Q6Q0C0 670 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 PLPP7Q8NBV4 271 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 ZNF428Q96B54 188 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 SPSB2Q99619 263 aa6.61□□□□□ -1.35
TDP1-207ENST00000553617 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
TDP1-207ENST00000553617 SH3BP5LQ7L8J4 393 aa6.6□□□□□ -1.35
TDP1-207ENST00000553617 RNF135Q8IUD6 432 aa6.6□□□□□ -1.35
TDP1-207ENST00000553617 AMOTL2Q9Y2J4 779 aa6.6□□□□□ -1.35
TDP1-207ENST00000553617 PCDHB9Q9Y5E1 797 aa6.6□□□□□ -1.35
TDP1-207ENST00000553617 SSFA2P28290 1259 aa6.59□□□□□ -1.35
TDP1-207ENST00000553617 MAP7D1Q3KQU3 841 aa6.59□□□□□ -1.35
TDP1-207ENST00000553617 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
TDP1-207ENST00000553617 ADAM32Q8TC27 787 aa6.59□□□□□ -1.35
TDP1-207ENST00000553617 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
TDP1-207ENST00000553617 RASA1P20936 1047 aa6.58□□□□□ -1.36
TDP1-207ENST00000553617 LARP1Q6PKG0 1096 aaKnown RBP6.58□□□□□ -1.36
TDP1-207ENST00000553617 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
TDP1-207ENST00000553617 ANKMY2Q8IV38 441 aa6.58□□□□□ -1.36
TDP1-207ENST00000553617 CCER1Q8TC90 406 aaPredicted RBP6.58□□□□□ -1.36
TDP1-207ENST00000553617 CDCA7Q9BWT1 371 aaPredicted RBP6.58□□□□□ -1.36
TDP1-207ENST00000553617 DKK1O94907 266 aa6.57□□□□□ -1.36
TDP1-207ENST00000553617 ADH1BP00325 375 aa6.57□□□□□ -1.36
TDP1-207ENST00000553617 RBM25P49756 843 aaKnown RBP6.57□□□□□ -1.36
TDP1-207ENST00000553617 CLDN10P78369 228 aa6.57□□□□□ -1.36
TDP1-207ENST00000553617 FAM200AQ8TCP9 573 aa6.57□□□□□ -1.36
TDP1-207ENST00000553617 ARHGAP9Q9BRR9 750 aa6.57□□□□□ -1.36
TDP1-207ENST00000553617 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
TDP1-207ENST00000553617 ZPR1O75312 459 aa6.56□□□□□ -1.36
TDP1-207ENST00000553617 SWI5Q1ZZU3 235 aa6.56□□□□□ -1.36
TDP1-207ENST00000553617 EML3Q32P44 896 aa6.56□□□□□ -1.36
TDP1-207ENST00000553617 TSGA10IPQ3SY00 556 aa6.56□□□□□ -1.36
TDP1-207ENST00000553617 PTCRAQ6ISU1 281 aaPredicted RBP6.56□□□□□ -1.36
TDP1-207ENST00000553617 OGFOD1Q8N543 542 aa6.56□□□□□ -1.36
TDP1-207ENST00000553617 ARID4AP29374 1257 aaPredicted RBP6.55□□□□□ -1.36
TDP1-207ENST00000553617 KCNC4Q03721 635 aa6.55□□□□□ -1.36
TDP1-207ENST00000553617 SIX5Q8N196 739 aa6.55□□□□□ -1.36
TDP1-207ENST00000553617 CCDC85AQ96PX6 553 aaPredicted RBP6.55□□□□□ -1.36
TDP1-207ENST00000553617 DPYDQ12882 1025 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 ZBTB33Q86T24 672 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 TRIM50Q86XT4 487 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 C1orf216Q8TAB5 229 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 ZNF516Q92618 1163 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 MTRQ99707 1265 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 KIAA1024Q9UPX6 916 aa6.54□□□□□ -1.36
TDP1-207ENST00000553617 ZBTB7BO15156 539 aaPredicted RBP6.53□□□□□ -1.36
TDP1-207ENST00000553617 ATP2B4P23634 1241 aa6.53□□□□□ -1.36
TDP1-207ENST00000553617 ATP1A2P50993 1020 aa6.53□□□□□ -1.36
TDP1-207ENST00000553617 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
TDP1-207ENST00000553617 DNAAF2Q9NVR5 837 aaKnown RBP6.53□□□□□ -1.36
TDP1-207ENST00000553617 DOLKQ9UPQ8 538 aa6.53□□□□□ -1.36
TDP1-207ENST00000553617 NOD1Q9Y239 953 aa6.53□□□□□ -1.36
TDP1-207ENST00000553617 SOWAHDA6NJG2 315 aa6.52□□□□□ -1.37
TDP1-207ENST00000553617 ERFEQ4G0M1 354 aa6.52□□□□□ -1.37
TDP1-207ENST00000553617 DNAJC14Q6Y2X3 702 aaPredicted RBP6.52□□□□□ -1.37
TDP1-207ENST00000553617 DZIP3Q86Y13 1208 aaKnown RBP6.52□□□□□ -1.37
TDP1-207ENST00000553617 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
TDP1-207ENST00000553617 C1QTNF2Q9BXJ5 285 aa6.52□□□□□ -1.37
TDP1-207ENST00000553617 ESPNB1AK53 854 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 OCLNQ16625 522 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 TJAP1Q5JTD0 557 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 CCDC24Q8N4L8 307 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 NKX2-3Q8TAU0 364 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 CARD14Q9BXL6 1004 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 SLC6A16Q9GZN6 736 aa6.51□□□□□ -1.37
TDP1-207ENST00000553617 MAGEB6P1A0A0J9YX57 407 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 E9PSI1 815 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 GIGYF1O75420 1035 aaPredicted RBP6.5□□□□□ -1.37
TDP1-207ENST00000553617 SERPINB4P48594 390 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 GTF2IP78347 998 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 NOM1Q5C9Z4 860 aaKnown RBP6.5□□□□□ -1.37
TDP1-207ENST00000553617 BPHLQ86WA6 291 aaPredicted RBP6.5□□□□□ -1.37
TDP1-207ENST00000553617 ZNF511Q8NB15 262 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 BAP1Q92560 729 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 PCDHGA11Q9Y5H2 935 aa6.5□□□□□ -1.37
TDP1-207ENST00000553617 RBM47A0AV96 593 aaKnown RBP6.49□□□□□ -1.37
TDP1-207ENST00000553617 ERCC3P19447 782 aa6.49□□□□□ -1.37
TDP1-207ENST00000553617 SEC13P55735 322 aa6.49□□□□□ -1.37
TDP1-207ENST00000553617 OXLD1Q5BKU9 147 aa6.49□□□□□ -1.37
TDP1-207ENST00000553617 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
TDP1-207ENST00000553617 TRMT44Q8IYL2 757 aaKnown RBP6.49□□□□□ -1.37
TDP1-207ENST00000553617 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
TDP1-207ENST00000553617 SCNN1AP37088 669 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms