RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 COL18A1P39060 1754 aa12.42□□□□□ -0.42
NPC2-204ENST00000553490 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
NPC2-204ENST00000553490 CHD4Q14839 1912 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 BCL9O00512 1426 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 USP6P35125 1406 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 PTGER2P43116 358 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
NPC2-204ENST00000553490 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
NPC2-204ENST00000553490 SRPK2P78362 688 aaKnown RBP12.4□□□□□ -0.42
NPC2-204ENST00000553490 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
NPC2-204ENST00000553490 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
NPC2-204ENST00000553490 NHSQ6T4R5 1651 aa12.4□□□□□ -0.42
NPC2-204ENST00000553490 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
NPC2-204ENST00000553490 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
NPC2-204ENST00000553490 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
NPC2-204ENST00000553490 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
NPC2-204ENST00000553490 PROM2Q8N271 834 aa12.38□□□□□ -0.43
NPC2-204ENST00000553490 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
NPC2-204ENST00000553490 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
NPC2-204ENST00000553490 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 NLRP6P59044 892 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 SLC15A2Q16348 729 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 SYT17Q9BSW7 474 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
NPC2-204ENST00000553490 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 ABCC6O95255 1503 aa12.37□□□□□ -0.43
NPC2-204ENST00000553490 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
NPC2-204ENST00000553490 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
NPC2-204ENST00000553490 C1QTNF8P60827 252 aa12.35□□□□□ -0.43
NPC2-204ENST00000553490 MAP3K5Q99683 1374 aa12.34□□□□□ -0.43
NPC2-204ENST00000553490 NFAT5O94916 1531 aa12.34□□□□□ -0.43
NPC2-204ENST00000553490 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
NPC2-204ENST00000553490 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
NPC2-204ENST00000553490 AXIN2Q9Y2T1 843 aa12.34□□□□□ -0.43
NPC2-204ENST00000553490 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
NPC2-204ENST00000553490 BTAF1O14981 1849 aa12.33□□□□□ -0.44
NPC2-204ENST00000553490 ARXQ96QS3 562 aa12.33□□□□□ -0.44
NPC2-204ENST00000553490 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
NPC2-204ENST00000553490 SOX12O15370 315 aa12.32□□□□□ -0.44
NPC2-204ENST00000553490 NBPF1Q3BBV0 1214 aa12.32□□□□□ -0.44
NPC2-204ENST00000553490 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
NPC2-204ENST00000553490 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
NPC2-204ENST00000553490 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
NPC2-204ENST00000553490 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
NPC2-204ENST00000553490 CEP350Q5VT06 3117 aa12.3□□□□□ -0.44
NPC2-204ENST00000553490 EXOC5O00471 708 aa12.3□□□□□ -0.44
NPC2-204ENST00000553490 GIGYF1O75420 1035 aaPredicted RBP12.3□□□□□ -0.44
NPC2-204ENST00000553490 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
NPC2-204ENST00000553490 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
NPC2-204ENST00000553490 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
NPC2-204ENST00000553490 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 TUBGCP6Q96RT7 1819 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 GPR162Q16538 588 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 ZNF827Q17R98 1081 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 TTC21BQ7Z4L5 1316 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 USP54Q70EL1 1684 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 LTN1O94822 1766 aa12.28□□□□□ -0.44
NPC2-204ENST00000553490 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
NPC2-204ENST00000553490 EVC2Q86UK5 1308 aa12.27□□□□□ -0.45
NPC2-204ENST00000553490 TTC21AQ8NDW8 1320 aa12.27□□□□□ -0.45
NPC2-204ENST00000553490 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
NPC2-204ENST00000553490 ERBB3P21860 1342 aa12.26□□□□□ -0.45
NPC2-204ENST00000553490 POLD1P28340 1107 aa12.24□□□□□ -0.45
NPC2-204ENST00000553490 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
NPC2-204ENST00000553490 DOT1LQ8TEK3 1739 aa12.24□□□□□ -0.45
NPC2-204ENST00000553490 IL2RBP14784 551 aa12.23□□□□□ -0.45
NPC2-204ENST00000553490 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
NPC2-204ENST00000553490 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
NPC2-204ENST00000553490 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
NPC2-204ENST00000553490 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
NPC2-204ENST00000553490 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
NPC2-204ENST00000553490 PNPLA7Q6ZV29 1317 aa12.22□□□□□ -0.45
NPC2-204ENST00000553490 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
NPC2-204ENST00000553490 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
NPC2-204ENST00000553490 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
NPC2-204ENST00000553490 LY75O60449 1722 aa12.2□□□□□ -0.46
NPC2-204ENST00000553490 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
NPC2-204ENST00000553490 SLC27A3Q5K4L6 730 aa12.2□□□□□ -0.46
NPC2-204ENST00000553490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.19□□□□□ -0.46
NPC2-204ENST00000553490 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
NPC2-204ENST00000553490 ATP10DQ9P241 1426 aa12.19□□□□□ -0.46
NPC2-204ENST00000553490 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
NPC2-204ENST00000553490 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
NPC2-204ENST00000553490 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
NPC2-204ENST00000553490 YBX3P16989 372 aaKnown RBP eCLIP12.17□□□□□ -0.463e-8■■■□□ 18.3
NPC2-204ENST00000553490 NME9Q86XW9 330 aa12.17□□□□□ -0.46
NPC2-204ENST00000553490 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
NPC2-204ENST00000553490 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
NPC2-204ENST00000553490 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
NPC2-204ENST00000553490 KCNQ4P56696 695 aa12.16□□□□□ -0.46
NPC2-204ENST00000553490 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
NPC2-204ENST00000553490 NSD2O96028 1365 aa12.16□□□□□ -0.46
NPC2-204ENST00000553490 EDC4Q6P2E9 1401 aaKnown RBP12.15□□□□□ -0.46
NPC2-204ENST00000553490 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
NPC2-204ENST00000553490 C5P01031 1676 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms