RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
SYNE2-210ENST00000553455 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
SYNE2-210ENST00000553455 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
SYNE2-210ENST00000553455 SKOR1P84550 965 aa9.51□□□□□ -0.89
SYNE2-210ENST00000553455 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
SYNE2-210ENST00000553455 TRMT44Q8IYL2 757 aaKnown RBP9.51□□□□□ -0.89
SYNE2-210ENST00000553455 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-210ENST00000553455 PODXL2Q9NZ53 605 aa9.51□□□□□ -0.89
SYNE2-210ENST00000553455 CARNS1A5YM72 827 aa9.5□□□□□ -0.89
SYNE2-210ENST00000553455 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
SYNE2-210ENST00000553455 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-210ENST00000553455 GGCXP38435 758 aa9.5□□□□□ -0.89
SYNE2-210ENST00000553455 SLC10A4Q96EP9 437 aa9.5□□□□□ -0.89
SYNE2-210ENST00000553455 ZMIZ1Q9ULJ6 1067 aa9.5□□□□□ -0.89
SYNE2-210ENST00000553455 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-210ENST00000553455 ELOAQ14241 798 aaKnown RBP9.49□□□□□ -0.89
SYNE2-210ENST00000553455 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
SYNE2-210ENST00000553455 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
SYNE2-210ENST00000553455 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
SYNE2-210ENST00000553455 ESPNB1AK53 854 aa9.48□□□□□ -0.89
SYNE2-210ENST00000553455 WNT7BP56706 349 aa9.48□□□□□ -0.89
SYNE2-210ENST00000553455 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-210ENST00000553455 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
SYNE2-210ENST00000553455 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-210ENST00000553455 PDE4CQ08493 712 aa9.47□□□□□ -0.89
SYNE2-210ENST00000553455 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
SYNE2-210ENST00000553455 EMID1Q96A84 441 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-210ENST00000553455 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L21D6R901 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 RPIAP49247 311 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 STK32AQ8WU08 396 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
SYNE2-210ENST00000553455 ZBTB7CA1YPR0 619 aa9.45□□□□□ -0.9
SYNE2-210ENST00000553455 ATP5J2-PTCD1G3V325 749 aa9.45□□□□□ -0.9
SYNE2-210ENST00000553455 VARSP26640 1264 aaKnown RBP9.45□□□□□ -0.9
SYNE2-210ENST00000553455 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
SYNE2-210ENST00000553455 PTK7Q13308 1070 aa9.45□□□□□ -0.9
SYNE2-210ENST00000553455 EML3Q32P44 896 aa9.45□□□□□ -0.9
SYNE2-210ENST00000553455 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
SYNE2-210ENST00000553455 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
SYNE2-210ENST00000553455 NOVA2Q9UNW9 492 aaKnown RBP9.45□□□□□ -0.9
SYNE2-210ENST00000553455 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
SYNE2-210ENST00000553455 AEBP1Q8IUX7 1158 aa9.44□□□□□ -0.9
SYNE2-210ENST00000553455 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-210ENST00000553455 MAP4K5Q9Y4K4 846 aa9.44□□□□□ -0.9
SYNE2-210ENST00000553455 RASA1P20936 1047 aa9.43□□□□□ -0.9
SYNE2-210ENST00000553455 CLDN10P78369 228 aa9.43□□□□□ -0.9
SYNE2-210ENST00000553455 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
SYNE2-210ENST00000553455 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
SYNE2-210ENST00000553455 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
SYNE2-210ENST00000553455 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
SYNE2-210ENST00000553455 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
SYNE2-210ENST00000553455 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-210ENST00000553455 BRD1O95696 1058 aa9.41□□□□□ -0.9
SYNE2-210ENST00000553455 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
SYNE2-210ENST00000553455 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
SYNE2-210ENST00000553455 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
SYNE2-210ENST00000553455 NOD1Q9Y239 953 aa9.41□□□□□ -0.9
SYNE2-210ENST00000553455 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
SYNE2-210ENST00000553455 DKK1O94907 266 aa9.4□□□□□ -0.9
SYNE2-210ENST00000553455 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
SYNE2-210ENST00000553455 EHBP1Q8NDI1 1231 aa9.4□□□□□ -0.9
SYNE2-210ENST00000553455 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
SYNE2-210ENST00000553455 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-210ENST00000553455 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
SYNE2-210ENST00000553455 ANKMY2Q8IV38 441 aa9.39□□□□□ -0.91
SYNE2-210ENST00000553455 ZNF594Q96JF6 807 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-210ENST00000553455 CDK15Q96Q40 435 aa9.39□□□□□ -0.91
SYNE2-210ENST00000553455 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
SYNE2-210ENST00000553455 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-210ENST00000553455 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
SYNE2-210ENST00000553455 ATP1A2P50993 1020 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 RAB15P59190 212 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 GTF2IP78347 998 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 DPYDQ12882 1025 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 SIX5Q8N196 739 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 DNAAF2Q9NVR5 837 aaKnown RBP9.38□□□□□ -0.91
SYNE2-210ENST00000553455 PCDHGA11Q9Y5H2 935 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
SYNE2-210ENST00000553455 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
SYNE2-210ENST00000553455 SIAH2O43255 324 aa9.37□□□□□ -0.91
SYNE2-210ENST00000553455 KCNA1Q09470 495 aa9.37□□□□□ -0.91
SYNE2-210ENST00000553455 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
SYNE2-210ENST00000553455 GRM5P41594 1212 aa9.36□□□□□ -0.91
SYNE2-210ENST00000553455 SCTRP47872 440 aa9.36□□□□□ -0.91
SYNE2-210ENST00000553455 MPNDQ8N594 471 aa9.36□□□□□ -0.91
SYNE2-210ENST00000553455 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
SYNE2-210ENST00000553455 FSHRP23945 695 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms