RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 CRB1P82279 1406 aa11.48□□□□□ -0.57
PCNX1-204ENST00000553428 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
PCNX1-204ENST00000553428 A0A0G2JS52 829 aa11.47□□□□□ -0.57
PCNX1-204ENST00000553428 FYB1O15117 783 aa11.47□□□□□ -0.57
PCNX1-204ENST00000553428 SOX12O15370 315 aa11.47□□□□□ -0.57
PCNX1-204ENST00000553428 MYT1Q01538 1121 aa11.47□□□□□ -0.57
PCNX1-204ENST00000553428 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
PCNX1-204ENST00000553428 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
PCNX1-204ENST00000553428 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
PCNX1-204ENST00000553428 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
PCNX1-204ENST00000553428 BLMP54132 1417 aaPredicted RBP11.44□□□□□ -0.58
PCNX1-204ENST00000553428 NSD3Q9BZ95 1437 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 THSD7AQ9UPZ6 1657 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 CSB-PGBD3P0DP91 1061 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 IP6K1Q92551 441 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 CARD10Q9BWT7 1032 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 USP35Q9P2H5 1018 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 COL18A1P39060 1754 aa11.44□□□□□ -0.58
PCNX1-204ENST00000553428 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
PCNX1-204ENST00000553428 ERBB3P21860 1342 aa11.43□□□□□ -0.58
PCNX1-204ENST00000553428 C11orf95C9JLR9 678 aaPredicted RBP11.43□□□□□ -0.58
PCNX1-204ENST00000553428 POLR3GLQ9BT43 218 aa11.43□□□□□ -0.58
PCNX1-204ENST00000553428 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
PCNX1-204ENST00000553428 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
PCNX1-204ENST00000553428 MYOM1P52179 1685 aa11.42□□□□□ -0.58
PCNX1-204ENST00000553428 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
PCNX1-204ENST00000553428 AMPHP49418 695 aa11.41□□□□□ -0.58
PCNX1-204ENST00000553428 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
PCNX1-204ENST00000553428 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
PCNX1-204ENST00000553428 FAM196AQ6ZSG2 479 aa11.41□□□□□ -0.58
PCNX1-204ENST00000553428 HOXC9P31274 260 aa11.4□□□□□ -0.58
PCNX1-204ENST00000553428 ANKRD24Q8TF21 1146 aa11.4□□□□□ -0.58
PCNX1-204ENST00000553428 PANK3Q9H999 370 aa11.4□□□□□ -0.58
PCNX1-204ENST00000553428 NSD2O96028 1365 aa11.4□□□□□ -0.59
PCNX1-204ENST00000553428 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
PCNX1-204ENST00000553428 NLRP2Q9NX02 1062 aa11.39□□□□□ -0.59
PCNX1-204ENST00000553428 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
PCNX1-204ENST00000553428 DDB1Q16531 1140 aa11.38□□□□□ -0.59
PCNX1-204ENST00000553428 FLT4P35916 1363 aa11.38□□□□□ -0.59
PCNX1-204ENST00000553428 BRWD3Q6RI45 1802 aa11.37□□□□□ -0.59
PCNX1-204ENST00000553428 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
PCNX1-204ENST00000553428 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
PCNX1-204ENST00000553428 PARP4Q9UKK3 1724 aaKnown RBP11.37□□□□□ -0.59
PCNX1-204ENST00000553428 BCL9O00512 1426 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
PCNX1-204ENST00000553428 EXOC5O00471 708 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 IL2RBP14784 551 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 FBLN1P23142 703 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 BAG6P46379 1132 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 INSRP06213 1382 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 LTN1O94822 1766 aa11.36□□□□□ -0.59
PCNX1-204ENST00000553428 OVOS2A0A0G2JMS6 1433 aa11.35□□□□□ -0.59
PCNX1-204ENST00000553428 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
PCNX1-204ENST00000553428 FAM182BQ5T319 152 aa11.34□□□□□ -0.59
PCNX1-204ENST00000553428 LTV1Q96GA3 475 aaPredicted RBP11.34□□□□□ -0.59
PCNX1-204ENST00000553428 TNS2Q63HR2 1409 aa11.34□□□□□ -0.59
PCNX1-204ENST00000553428 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
PCNX1-204ENST00000553428 POLKQ9UBT6 870 aa11.33□□□□□ -0.6
PCNX1-204ENST00000553428 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
PCNX1-204ENST00000553428 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
PCNX1-204ENST00000553428 LRRC37A3O60309 1634 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 RGPD5Q99666 1765 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 TRIM37O94972 964 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
PCNX1-204ENST00000553428 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
PCNX1-204ENST00000553428 MARCH10Q8NA82 808 aaPredicted RBP11.32□□□□□ -0.6
PCNX1-204ENST00000553428 NPC1L1Q9UHC9 1359 aa11.31□□□□□ -0.6
PCNX1-204ENST00000553428 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
PCNX1-204ENST00000553428 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
PCNX1-204ENST00000553428 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
PCNX1-204ENST00000553428 RGPD1P0DJD0 1748 aa11.3□□□□□ -0.6
PCNX1-204ENST00000553428 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
PCNX1-204ENST00000553428 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
PCNX1-204ENST00000553428 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
PCNX1-204ENST00000553428 APBA3O96018 575 aa11.29□□□□□ -0.6
PCNX1-204ENST00000553428 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
PCNX1-204ENST00000553428 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
PCNX1-204ENST00000553428 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
PCNX1-204ENST00000553428 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
PCNX1-204ENST00000553428 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
PCNX1-204ENST00000553428 NCAPD2Q15021 1401 aa11.28□□□□□ -0.6
PCNX1-204ENST00000553428 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-204ENST00000553428 TNNT2P45379 298 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-204ENST00000553428 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
PCNX1-204ENST00000553428 CAMKK2Q96RR4 588 aa11.28□□□□□ -0.6
PCNX1-204ENST00000553428 PLSCR1O15162 318 aa11.27□□□□□ -0.61
PCNX1-204ENST00000553428 MEGF6O75095 1541 aa11.26□□□□□ -0.61
PCNX1-204ENST00000553428 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
PCNX1-204ENST00000553428 USHBP1Q8N6Y0 703 aa11.26□□□□□ -0.61
PCNX1-204ENST00000553428 EYA1Q99502 592 aa11.26□□□□□ -0.61
PCNX1-204ENST00000553428 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
PCNX1-204ENST00000553428 EIF4A2Q14240 407 aaKnown RBP11.25□□□□□ -0.61
PCNX1-204ENST00000553428 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
PCNX1-204ENST00000553428 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
PCNX1-204ENST00000553428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.25□□□□□ -0.615e-9■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms