RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RXRBP28702 533 aa16.18■□□□□ 0.18
TRAFD1-209ENST00000552896 CHRNA2Q15822 529 aa16.18■□□□□ 0.18
TRAFD1-209ENST00000552896 VPS72Q15906 364 aa16.18■□□□□ 0.18
TRAFD1-209ENST00000552896 COG3Q96JB2 828 aa16.18■□□□□ 0.18
TRAFD1-209ENST00000552896 CGNL1Q0VF96 1302 aa16.18■□□□□ 0.18
TRAFD1-209ENST00000552896 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
TRAFD1-209ENST00000552896 ARHGEF25Q86VW2 580 aa16.17■□□□□ 0.18
TRAFD1-209ENST00000552896 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
TRAFD1-209ENST00000552896 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
TRAFD1-209ENST00000552896 NSD2O96028 1365 aa16.16■□□□□ 0.18
TRAFD1-209ENST00000552896 FYB1O15117 783 aa16.16■□□□□ 0.18
TRAFD1-209ENST00000552896 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
TRAFD1-209ENST00000552896 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
TRAFD1-209ENST00000552896 SOX12O15370 315 aa16.15■□□□□ 0.18
TRAFD1-209ENST00000552896 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
TRAFD1-209ENST00000552896 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
TRAFD1-209ENST00000552896 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
TRAFD1-209ENST00000552896 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
TRAFD1-209ENST00000552896 PANK3Q9H999 370 aa16.14■□□□□ 0.17
TRAFD1-209ENST00000552896 CRB1P82279 1406 aa16.13■□□□□ 0.17
TRAFD1-209ENST00000552896 SPATA31A5Q5VU36 1347 aa16.13■□□□□ 0.17
TRAFD1-209ENST00000552896 SPATA31A7Q8IWB4 1347 aa16.13■□□□□ 0.17
TRAFD1-209ENST00000552896 EP400Q96L91 3159 aa16.13■□□□□ 0.17
TRAFD1-209ENST00000552896 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
TRAFD1-209ENST00000552896 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
TRAFD1-209ENST00000552896 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
TRAFD1-209ENST00000552896 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
TRAFD1-209ENST00000552896 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-209ENST00000552896 SPATA31A1Q5TZJ5 1347 aa16.11■□□□□ 0.17
TRAFD1-209ENST00000552896 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
TRAFD1-209ENST00000552896 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
TRAFD1-209ENST00000552896 WDR17Q8IZU2 1322 aa16.1■□□□□ 0.17
TRAFD1-209ENST00000552896 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
TRAFD1-209ENST00000552896 MAP3K19Q56UN5 1328 aa16.09■□□□□ 0.17
TRAFD1-209ENST00000552896 SMG6Q86US8 1419 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-209ENST00000552896 EVA1CP58658 441 aa16.08■□□□□ 0.16
TRAFD1-209ENST00000552896 LARP1Q6PKG0 1096 aaKnown RBP16.08■□□□□ 0.16
TRAFD1-209ENST00000552896 KNSTRNQ9Y448 316 aa16.08■□□□□ 0.16
TRAFD1-209ENST00000552896 ERBB3P21860 1342 aa16.08■□□□□ 0.16
TRAFD1-209ENST00000552896 FLT4P35916 1363 aa16.07■□□□□ 0.16
TRAFD1-209ENST00000552896 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
TRAFD1-209ENST00000552896 SOCS7O14512 581 aa16.06■□□□□ 0.16
TRAFD1-209ENST00000552896 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
TRAFD1-209ENST00000552896 IP6K1Q92551 441 aa16.06■□□□□ 0.16
TRAFD1-209ENST00000552896 HOXC9P31274 260 aa16.05■□□□□ 0.16
TRAFD1-209ENST00000552896 AMER1Q5JTC6 1135 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-209ENST00000552896 BARGINQ6ZT62 677 aa16.05■□□□□ 0.16
TRAFD1-209ENST00000552896 THRAP3Q9Y2W1 955 aaKnown RBP16.05■□□□□ 0.16
TRAFD1-209ENST00000552896 PER1O15534 1290 aaPredicted RBP16.04■□□□□ 0.16
TRAFD1-209ENST00000552896 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
TRAFD1-209ENST00000552896 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
TRAFD1-209ENST00000552896 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
TRAFD1-209ENST00000552896 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 INSRP06213 1382 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 AMPHP49418 695 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 TOM1L2Q6ZVM7 507 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 SBF2Q86WG5 1849 aa16.03■□□□□ 0.16
TRAFD1-209ENST00000552896 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
TRAFD1-209ENST00000552896 FBLN1P23142 703 aa16.02■□□□□ 0.16
TRAFD1-209ENST00000552896 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
TRAFD1-209ENST00000552896 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.16
TRAFD1-209ENST00000552896 TNS1Q9HBL0 1735 aaKnown RBP16.02■□□□□ 0.15
TRAFD1-209ENST00000552896 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
TRAFD1-209ENST00000552896 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
TRAFD1-209ENST00000552896 A0A0G2JS52 829 aa16■□□□□ 0.15
TRAFD1-209ENST00000552896 MYT1Q01538 1121 aa16■□□□□ 0.15
TRAFD1-209ENST00000552896 EMILIN1Q9Y6C2 1016 aa16■□□□□ 0.15
TRAFD1-209ENST00000552896 TNS2Q63HR2 1409 aa16■□□□□ 0.15
TRAFD1-209ENST00000552896 MORC1Q86VD1 984 aa15.99■□□□□ 0.15
TRAFD1-209ENST00000552896 NCAPD2Q15021 1401 aa15.99■□□□□ 0.15
TRAFD1-209ENST00000552896 CDCA7Q9BWT1 371 aaPredicted RBP15.98■□□□□ 0.15
TRAFD1-209ENST00000552896 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
TRAFD1-209ENST00000552896 POLKQ9UBT6 870 aa15.98■□□□□ 0.15
TRAFD1-209ENST00000552896 TNNT2P45379 298 aaPredicted RBP15.97■□□□□ 0.15
TRAFD1-209ENST00000552896 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
TRAFD1-209ENST00000552896 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
TRAFD1-209ENST00000552896 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
TRAFD1-209ENST00000552896 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-209ENST00000552896 LTV1Q96GA3 475 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-209ENST00000552896 MEGF6O75095 1541 aa15.94■□□□□ 0.14
TRAFD1-209ENST00000552896 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
TRAFD1-209ENST00000552896 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
TRAFD1-209ENST00000552896 RGPD3A6NKT7 1758 aaPredicted RBP15.94■□□□□ 0.14
TRAFD1-209ENST00000552896 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
TRAFD1-209ENST00000552896 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
TRAFD1-209ENST00000552896 DOT1LQ8TEK3 1739 aa15.93■□□□□ 0.14
TRAFD1-209ENST00000552896 COL3A1P02461 1466 aaPredicted RBP15.92■□□□□ 0.14
TRAFD1-209ENST00000552896 IL2RBP14784 551 aa15.92■□□□□ 0.14
TRAFD1-209ENST00000552896 DDB1Q16531 1140 aa15.91■□□□□ 0.14
TRAFD1-209ENST00000552896 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAFD1-209ENST00000552896 BCL9O00512 1426 aa15.91■□□□□ 0.14
TRAFD1-209ENST00000552896 PLEKHG2Q9H7P9 1386 aa15.9■□□□□ 0.14
TRAFD1-209ENST00000552896 VIRMAQ69YN4 1812 aaKnown RBP15.9■□□□□ 0.14
TRAFD1-209ENST00000552896 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
TRAFD1-209ENST00000552896 NBPF6Q5VWK0 638 aa15.9■□□□□ 0.14
TRAFD1-209ENST00000552896 NBPF4Q96M43 638 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms