RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 HSPA1LP34931 641 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
MMP19-209ENST00000552872 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 RGPD5Q99666 1765 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 SBNO1A3KN83 1393 aa13.49□□□□□ -0.25
MMP19-209ENST00000552872 HMOX1P09601 288 aa13.48□□□□□ -0.25
MMP19-209ENST00000552872 USHBP1Q8N6Y0 703 aa13.47□□□□□ -0.25
MMP19-209ENST00000552872 NFAT5O94916 1531 aa13.47□□□□□ -0.25
MMP19-209ENST00000552872 COL16A1Q07092 1604 aaPredicted RBP13.47□□□□□ -0.25
MMP19-209ENST00000552872 KIAA0232Q92628 1395 aa13.47□□□□□ -0.25
MMP19-209ENST00000552872 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
MMP19-209ENST00000552872 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
MMP19-209ENST00000552872 SHPRHQ149N8 1683 aa13.46□□□□□ -0.25
MMP19-209ENST00000552872 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
MMP19-209ENST00000552872 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
MMP19-209ENST00000552872 NBR1Q14596 966 aa13.46□□□□□ -0.25
MMP19-209ENST00000552872 WDR43Q15061 677 aaKnown RBP eCLIP13.46□□□□□ -0.25
MMP19-209ENST00000552872 HOXC9P31274 260 aa13.46□□□□□ -0.25
MMP19-209ENST00000552872 AHDC1Q5TGY3 1603 aaPredicted RBP13.46□□□□□ -0.26
MMP19-209ENST00000552872 USP19O94966 1318 aa13.46□□□□□ -0.26
MMP19-209ENST00000552872 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
MMP19-209ENST00000552872 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
MMP19-209ENST00000552872 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
MMP19-209ENST00000552872 EP400Q96L91 3159 aa13.45□□□□□ -0.26
MMP19-209ENST00000552872 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
MMP19-209ENST00000552872 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
MMP19-209ENST00000552872 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
MMP19-209ENST00000552872 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
MMP19-209ENST00000552872 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
MMP19-209ENST00000552872 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
MMP19-209ENST00000552872 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
MMP19-209ENST00000552872 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
MMP19-209ENST00000552872 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
MMP19-209ENST00000552872 PNPLA6Q8IY17 1366 aa13.44□□□□□ -0.26
MMP19-209ENST00000552872 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
MMP19-209ENST00000552872 SLIT3O75094 1523 aa13.43□□□□□ -0.26
MMP19-209ENST00000552872 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
MMP19-209ENST00000552872 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
MMP19-209ENST00000552872 PRDM11Q9NQV5 511 aa13.43□□□□□ -0.26
MMP19-209ENST00000552872 RRP7AQ9Y3A4 280 aaKnown RBP13.43□□□□□ -0.26
MMP19-209ENST00000552872 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
MMP19-209ENST00000552872 USP54Q70EL1 1684 aa13.42□□□□□ -0.26
MMP19-209ENST00000552872 IL13P35225 146 aa13.42□□□□□ -0.26
MMP19-209ENST00000552872 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
MMP19-209ENST00000552872 FLT4P35916 1363 aa13.42□□□□□ -0.26
MMP19-209ENST00000552872 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
MMP19-209ENST00000552872 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
MMP19-209ENST00000552872 CDK12Q9NYV4 1490 aaPredicted RBP13.41□□□□□ -0.26
MMP19-209ENST00000552872 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
MMP19-209ENST00000552872 SULT6B1Q6IMI4 303 aa13.4□□□□□ -0.26
MMP19-209ENST00000552872 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
MMP19-209ENST00000552872 IP6K1Q92551 441 aa13.4□□□□□ -0.26
MMP19-209ENST00000552872 EYA1Q99502 592 aa13.4□□□□□ -0.26
MMP19-209ENST00000552872 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
MMP19-209ENST00000552872 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
MMP19-209ENST00000552872 ANKRD24Q8TF21 1146 aa13.39□□□□□ -0.27
MMP19-209ENST00000552872 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
MMP19-209ENST00000552872 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
MMP19-209ENST00000552872 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
MMP19-209ENST00000552872 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
MMP19-209ENST00000552872 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
MMP19-209ENST00000552872 APAF1O14727 1248 aa13.38□□□□□ -0.27
MMP19-209ENST00000552872 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
MMP19-209ENST00000552872 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
MMP19-209ENST00000552872 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
MMP19-209ENST00000552872 NUDCQ9Y266 331 aa13.37□□□□□ -0.27
MMP19-209ENST00000552872 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
MMP19-209ENST00000552872 SOCS7O14512 581 aa13.37□□□□□ -0.27
MMP19-209ENST00000552872 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
MMP19-209ENST00000552872 COL18A1P39060 1754 aa13.37□□□□□ -0.27
MMP19-209ENST00000552872 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
MMP19-209ENST00000552872 INSRP06213 1382 aa13.36□□□□□ -0.27
MMP19-209ENST00000552872 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
MMP19-209ENST00000552872 RTN4Q9NQC3 1192 aaKnown RBP13.35□□□□□ -0.27
MMP19-209ENST00000552872 ERBB3P21860 1342 aa13.35□□□□□ -0.27
MMP19-209ENST00000552872 LRP6O75581 1613 aa13.35□□□□□ -0.27
MMP19-209ENST00000552872 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
MMP19-209ENST00000552872 EVA1CP58658 441 aa13.34□□□□□ -0.27
MMP19-209ENST00000552872 COL22A1Q8NFW1 1626 aaPredicted RBP13.34□□□□□ -0.27
MMP19-209ENST00000552872 JCADQ9P266 1359 aa13.34□□□□□ -0.27
MMP19-209ENST00000552872 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
MMP19-209ENST00000552872 TCP11L2Q8N4U5 519 aa13.33□□□□□ -0.28
MMP19-209ENST00000552872 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.28
MMP19-209ENST00000552872 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
MMP19-209ENST00000552872 CPDO75976 1380 aa13.32□□□□□ -0.28
MMP19-209ENST00000552872 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
MMP19-209ENST00000552872 MEX3CQ5U5Q3 659 aaKnown RBP13.32□□□□□ -0.28
MMP19-209ENST00000552872 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
MMP19-209ENST00000552872 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
MMP19-209ENST00000552872 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
MMP19-209ENST00000552872 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
MMP19-209ENST00000552872 DCTN1Q14203 1278 aa13.31□□□□□ -0.28
MMP19-209ENST00000552872 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
MMP19-209ENST00000552872 CDCA7LQ96GN5 454 aa13.31□□□□□ -0.28
MMP19-209ENST00000552872 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
MMP19-209ENST00000552872 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
MMP19-209ENST00000552872 COL5A2P05997 1499 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms