RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 QRICH2Q9H0J4 1663 aa12.44□□□□□ -0.42
TMEM116-217ENST00000552801 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
TMEM116-217ENST00000552801 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
TMEM116-217ENST00000552801 GCP02774 474 aa12.43□□□□□ -0.42
TMEM116-217ENST00000552801 NLRP6P59044 892 aa12.43□□□□□ -0.42
TMEM116-217ENST00000552801 EZH2Q15910 746 aaKnown RBP12.43□□□□□ -0.42
TMEM116-217ENST00000552801 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
TMEM116-217ENST00000552801 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
TMEM116-217ENST00000552801 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
TMEM116-217ENST00000552801 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
TMEM116-217ENST00000552801 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
TMEM116-217ENST00000552801 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
TMEM116-217ENST00000552801 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
TMEM116-217ENST00000552801 CABP1Q9NZU7 370 aa12.42□□□□□ -0.42
TMEM116-217ENST00000552801 CPDO75976 1380 aa12.42□□□□□ -0.42
TMEM116-217ENST00000552801 DISP2A7MBM2 1401 aa12.41□□□□□ -0.42
TMEM116-217ENST00000552801 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
TMEM116-217ENST00000552801 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
TMEM116-217ENST00000552801 USP19O94966 1318 aa12.4□□□□□ -0.42
TMEM116-217ENST00000552801 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
TMEM116-217ENST00000552801 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
TMEM116-217ENST00000552801 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
TMEM116-217ENST00000552801 SOX12O15370 315 aa12.39□□□□□ -0.43
TMEM116-217ENST00000552801 L3MBTL2Q969R5 705 aa12.39□□□□□ -0.43
TMEM116-217ENST00000552801 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-217ENST00000552801 CRB1P82279 1406 aa12.39□□□□□ -0.43
TMEM116-217ENST00000552801 DDB1Q16531 1140 aa12.38□□□□□ -0.43
TMEM116-217ENST00000552801 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
TMEM116-217ENST00000552801 CAMKK2Q96RR4 588 aa12.38□□□□□ -0.43
TMEM116-217ENST00000552801 USP6P35125 1406 aa12.38□□□□□ -0.43
TMEM116-217ENST00000552801 SRCAPQ6ZRS2 3230 aa12.38□□□□□ -0.43
TMEM116-217ENST00000552801 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-217ENST00000552801 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
TMEM116-217ENST00000552801 OVOS2A0A0G2JMS6 1433 aa12.36□□□□□ -0.43
TMEM116-217ENST00000552801 OVOS2A0A0J9YW53 1432 aa12.36□□□□□ -0.43
TMEM116-217ENST00000552801 OVOS2Q6IE36 1432 aa12.36□□□□□ -0.43
TMEM116-217ENST00000552801 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
TMEM116-217ENST00000552801 PARP4Q9UKK3 1724 aaKnown RBP12.36□□□□□ -0.43
TMEM116-217ENST00000552801 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
TMEM116-217ENST00000552801 TRPM1Q7Z4N2 1603 aa12.35□□□□□ -0.43
TMEM116-217ENST00000552801 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
TMEM116-217ENST00000552801 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
TMEM116-217ENST00000552801 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
TMEM116-217ENST00000552801 TTC21BQ7Z4L5 1316 aa12.33□□□□□ -0.44
TMEM116-217ENST00000552801 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
TMEM116-217ENST00000552801 SLIT3O75094 1523 aa12.33□□□□□ -0.44
TMEM116-217ENST00000552801 RREB1Q92766 1687 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 SPON1Q9HCB6 807 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 AKAP12Q02952 1782 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
TMEM116-217ENST00000552801 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
TMEM116-217ENST00000552801 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
TMEM116-217ENST00000552801 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
TMEM116-217ENST00000552801 EXOC5O00471 708 aa12.3□□□□□ -0.44
TMEM116-217ENST00000552801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
TMEM116-217ENST00000552801 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
TMEM116-217ENST00000552801 LRRC37A3O60309 1634 aa12.3□□□□□ -0.44
TMEM116-217ENST00000552801 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
TMEM116-217ENST00000552801 RGPD5Q99666 1765 aa12.29□□□□□ -0.44
TMEM116-217ENST00000552801 TONSLQ96HA7 1378 aa12.29□□□□□ -0.44
TMEM116-217ENST00000552801 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
TMEM116-217ENST00000552801 KCNQ2O43526 872 aa12.29□□□□□ -0.44
TMEM116-217ENST00000552801 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
TMEM116-217ENST00000552801 SBF2Q86WG5 1849 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 PLSCR1O15162 318 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 TERF2IPQ9NYB0 399 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
TMEM116-217ENST00000552801 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
TMEM116-217ENST00000552801 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
TMEM116-217ENST00000552801 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM116-217ENST00000552801 KAT6BQ8WYB5 2073 aa12.27□□□□□ -0.45
TMEM116-217ENST00000552801 COL18A1P39060 1754 aa12.26□□□□□ -0.45
TMEM116-217ENST00000552801 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
TMEM116-217ENST00000552801 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
TMEM116-217ENST00000552801 YY1P25490 414 aa12.25□□□□□ -0.45
TMEM116-217ENST00000552801 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
TMEM116-217ENST00000552801 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
TMEM116-217ENST00000552801 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
TMEM116-217ENST00000552801 ABCC6O95255 1503 aa12.24□□□□□ -0.45
TMEM116-217ENST00000552801 LTN1O94822 1766 aa12.24□□□□□ -0.45
TMEM116-217ENST00000552801 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
TMEM116-217ENST00000552801 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
TMEM116-217ENST00000552801 IL2RBP14784 551 aa12.23□□□□□ -0.45
TMEM116-217ENST00000552801 NME9Q86XW9 330 aa12.23□□□□□ -0.45
TMEM116-217ENST00000552801 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
TMEM116-217ENST00000552801 ZBTB7AO95365 584 aa12.22□□□□□ -0.45
TMEM116-217ENST00000552801 TXNRD1Q16881 649 aa12.22□□□□□ -0.45
TMEM116-217ENST00000552801 ACSBG1Q96GR2 724 aa12.22□□□□□ -0.45
TMEM116-217ENST00000552801 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
TMEM116-217ENST00000552801 NFAT5O94916 1531 aa12.22□□□□□ -0.45
TMEM116-217ENST00000552801 ANKRD24Q8TF21 1146 aa12.21□□□□□ -0.45
TMEM116-217ENST00000552801 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.45
TMEM116-217ENST00000552801 USP31Q70CQ4 1352 aa12.21□□□□□ -0.45
TMEM116-217ENST00000552801 ERBB3P21860 1342 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms