RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 CHRNA2Q15822 529 aa19.48■□□□□ 0.71
LETMD1-235ENST00000552739 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
LETMD1-235ENST00000552739 LTN1O94822 1766 aa19.47■□□□□ 0.71
LETMD1-235ENST00000552739 BRWD3Q6RI45 1802 aa19.47■□□□□ 0.71
LETMD1-235ENST00000552739 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
LETMD1-235ENST00000552739 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
LETMD1-235ENST00000552739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
LETMD1-235ENST00000552739 PPP4R2Q9NY27 417 aa19.47■□□□□ 0.71
LETMD1-235ENST00000552739 ABCC6O95255 1503 aa19.46■□□□□ 0.71
LETMD1-235ENST00000552739 NME9Q86XW9 330 aa19.45■□□□□ 0.7
LETMD1-235ENST00000552739 RGPD5Q99666 1765 aa19.45■□□□□ 0.7
LETMD1-235ENST00000552739 SMG6Q86US8 1419 aaKnown RBP19.44■□□□□ 0.7
LETMD1-235ENST00000552739 KCNH5Q8NCM2 988 aa19.44■□□□□ 0.7
LETMD1-235ENST00000552739 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
LETMD1-235ENST00000552739 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
LETMD1-235ENST00000552739 COL5A2P05997 1499 aaPredicted RBP19.44■□□□□ 0.7
LETMD1-235ENST00000552739 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
LETMD1-235ENST00000552739 ZRANB1Q9UGI0 708 aa19.43■□□□□ 0.7
LETMD1-235ENST00000552739 AATKQ6ZMQ8 1374 aa19.43■□□□□ 0.7
LETMD1-235ENST00000552739 CCDC9Q9Y3X0 531 aaKnown RBP19.42■□□□□ 0.7
LETMD1-235ENST00000552739 SPATA31A5Q5VU36 1347 aa19.42■□□□□ 0.7
LETMD1-235ENST00000552739 SPATA31A7Q8IWB4 1347 aa19.42■□□□□ 0.7
LETMD1-235ENST00000552739 WNK3Q9BYP7 1800 aa19.4■□□□□ 0.7
LETMD1-235ENST00000552739 ARHGEF25Q86VW2 580 aa19.39■□□□□ 0.7
LETMD1-235ENST00000552739 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
LETMD1-235ENST00000552739 SOX12O15370 315 aa19.38■□□□□ 0.69
LETMD1-235ENST00000552739 ONECUT3O60422 494 aaPredicted RBP19.38■□□□□ 0.69
LETMD1-235ENST00000552739 SPATA31A1Q5TZJ5 1347 aa19.37■□□□□ 0.69
LETMD1-235ENST00000552739 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
LETMD1-235ENST00000552739 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
LETMD1-235ENST00000552739 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
LETMD1-235ENST00000552739 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
LETMD1-235ENST00000552739 EVA1CP58658 441 aa19.35■□□□□ 0.69
LETMD1-235ENST00000552739 CRB1P82279 1406 aa19.35■□□□□ 0.69
LETMD1-235ENST00000552739 SEPT12Q8IYM1 358 aa19.35■□□□□ 0.69
LETMD1-235ENST00000552739 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
LETMD1-235ENST00000552739 FAM98CQ17RN3 349 aaKnown RBP19.34■□□□□ 0.69
LETMD1-235ENST00000552739 LARP1Q6PKG0 1096 aaKnown RBP19.34■□□□□ 0.69
LETMD1-235ENST00000552739 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
LETMD1-235ENST00000552739 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
LETMD1-235ENST00000552739 COG3Q96JB2 828 aa19.34■□□□□ 0.69
LETMD1-235ENST00000552739 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
LETMD1-235ENST00000552739 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.69
LETMD1-235ENST00000552739 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.682e-8■■■□□ 17.9
LETMD1-235ENST00000552739 POLR3GLQ9BT43 218 aa19.33■□□□□ 0.68
LETMD1-235ENST00000552739 EP400Q96L91 3159 aa19.33■□□□□ 0.68
LETMD1-235ENST00000552739 FYB1O15117 783 aa19.32■□□□□ 0.68
LETMD1-235ENST00000552739 WDR17Q8IZU2 1322 aa19.31■□□□□ 0.68
LETMD1-235ENST00000552739 LRRC37A3O60309 1634 aa19.3■□□□□ 0.68
LETMD1-235ENST00000552739 INSRP06213 1382 aa19.3■□□□□ 0.68
LETMD1-235ENST00000552739 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
LETMD1-235ENST00000552739 GGNBP2Q9H3C7 697 aa19.3■□□□□ 0.68
LETMD1-235ENST00000552739 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
LETMD1-235ENST00000552739 A0A0G2JS52 829 aa19.29■□□□□ 0.68
LETMD1-235ENST00000552739 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
LETMD1-235ENST00000552739 BLMP54132 1417 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-235ENST00000552739 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
LETMD1-235ENST00000552739 THRAP3Q9Y2W1 955 aaKnown RBP19.28■□□□□ 0.68
LETMD1-235ENST00000552739 RALBP1Q15311 655 aa19.28■□□□□ 0.68
LETMD1-235ENST00000552739 PEAK1Q9H792 1746 aa19.27■□□□□ 0.68
LETMD1-235ENST00000552739 KRT27Q7Z3Y8 459 aa19.27■□□□□ 0.68
LETMD1-235ENST00000552739 ERBB3P21860 1342 aa19.26■□□□□ 0.67
LETMD1-235ENST00000552739 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
LETMD1-235ENST00000552739 RTL1A6NKG5 1358 aa19.26■□□□□ 0.67
LETMD1-235ENST00000552739 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
LETMD1-235ENST00000552739 PNISRQ8TF01 805 aaKnown RBP19.25■□□□□ 0.67
LETMD1-235ENST00000552739 MAP3K19Q56UN5 1328 aa19.25■□□□□ 0.67
LETMD1-235ENST00000552739 RGPD1P0DJD0 1748 aa19.25■□□□□ 0.67
LETMD1-235ENST00000552739 PANK3Q9H999 370 aa19.24■□□□□ 0.67
LETMD1-235ENST00000552739 MYBBP1AQ9BQG0 1328 aaKnown RBP19.24■□□□□ 0.67
LETMD1-235ENST00000552739 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
LETMD1-235ENST00000552739 IP6K1Q92551 441 aa19.23■□□□□ 0.67
LETMD1-235ENST00000552739 CARD10Q9BWT7 1032 aa19.23■□□□□ 0.67
LETMD1-235ENST00000552739 DISP2A7MBM2 1401 aa19.23■□□□□ 0.67
LETMD1-235ENST00000552739 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
LETMD1-235ENST00000552739 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
LETMD1-235ENST00000552739 FBLN1P23142 703 aa19.22■□□□□ 0.67
LETMD1-235ENST00000552739 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
LETMD1-235ENST00000552739 TNS1Q9HBL0 1735 aaKnown RBP19.22■□□□□ 0.67
LETMD1-235ENST00000552739 ANKRD24Q8TF21 1146 aa19.22■□□□□ 0.67
LETMD1-235ENST00000552739 NSD2O96028 1365 aa19.21■□□□□ 0.67
LETMD1-235ENST00000552739 HOXC9P31274 260 aa19.21■□□□□ 0.67
LETMD1-235ENST00000552739 KIF24Q5T7B8 1368 aa19.2■□□□□ 0.66
LETMD1-235ENST00000552739 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
LETMD1-235ENST00000552739 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
LETMD1-235ENST00000552739 AMPHP49418 695 aa19.19■□□□□ 0.66
LETMD1-235ENST00000552739 CCDC125Q86Z20 511 aa19.19■□□□□ 0.66
LETMD1-235ENST00000552739 FLT4P35916 1363 aa19.18■□□□□ 0.66
LETMD1-235ENST00000552739 CDCA7Q9BWT1 371 aaPredicted RBP19.17■□□□□ 0.66
LETMD1-235ENST00000552739 FAM182BQ5T319 152 aa19.17■□□□□ 0.66
LETMD1-235ENST00000552739 NLRP2Q9NX02 1062 aa19.17■□□□□ 0.66
LETMD1-235ENST00000552739 SBF2Q86WG5 1849 aa19.16■□□□□ 0.66
LETMD1-235ENST00000552739 TNS2Q63HR2 1409 aa19.16■□□□□ 0.66
LETMD1-235ENST00000552739 MSH5O43196 834 aa19.15■□□□□ 0.66
LETMD1-235ENST00000552739 PDE3BQ13370 1112 aa19.15■□□□□ 0.66
LETMD1-235ENST00000552739 OVOS2A0A0G2JMS6 1433 aa19.14■□□□□ 0.65
LETMD1-235ENST00000552739 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.65
LETMD1-235ENST00000552739 EMILIN1Q9Y6C2 1016 aa19.14■□□□□ 0.65
LETMD1-235ENST00000552739 DDB1Q16531 1140 aa19.13■□□□□ 0.65
LETMD1-235ENST00000552739 KNSTRNQ9Y448 316 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms