RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
CDK4-213ENST00000552713 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
CDK4-213ENST00000552713 CRB1P82279 1406 aa12.47□□□□□ -0.41
CDK4-213ENST00000552713 PLSCR1O15162 318 aa12.47□□□□□ -0.41
CDK4-213ENST00000552713 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.41
CDK4-213ENST00000552713 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
CDK4-213ENST00000552713 ZBTB7AO95365 584 aa12.46□□□□□ -0.41
CDK4-213ENST00000552713 PTGER2P43116 358 aa12.46□□□□□ -0.41
CDK4-213ENST00000552713 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
CDK4-213ENST00000552713 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
CDK4-213ENST00000552713 ZNF784Q8NCA9 323 aaPredicted RBP12.45□□□□□ -0.42
CDK4-213ENST00000552713 SLIT3O75094 1523 aa12.45□□□□□ -0.42
CDK4-213ENST00000552713 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
CDK4-213ENST00000552713 MARCH10Q8NA82 808 aaPredicted RBP12.44□□□□□ -0.42
CDK4-213ENST00000552713 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
CDK4-213ENST00000552713 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
CDK4-213ENST00000552713 QRICH2Q9H0J4 1663 aa12.43□□□□□ -0.42
CDK4-213ENST00000552713 DDB1Q16531 1140 aa12.43□□□□□ -0.42
CDK4-213ENST00000552713 NBPF1Q3BBV0 1214 aa12.43□□□□□ -0.42
CDK4-213ENST00000552713 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
CDK4-213ENST00000552713 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
CDK4-213ENST00000552713 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
CDK4-213ENST00000552713 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
CDK4-213ENST00000552713 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
CDK4-213ENST00000552713 C11orf95C9JLR9 678 aaPredicted RBP12.41□□□□□ -0.42
CDK4-213ENST00000552713 NLRP6P59044 892 aa12.41□□□□□ -0.42
CDK4-213ENST00000552713 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
CDK4-213ENST00000552713 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
CDK4-213ENST00000552713 USP6P35125 1406 aa12.4□□□□□ -0.42
CDK4-213ENST00000552713 TXNRD1Q16881 649 aa12.4□□□□□ -0.42
CDK4-213ENST00000552713 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
CDK4-213ENST00000552713 BCL9O00512 1426 aa12.39□□□□□ -0.43
CDK4-213ENST00000552713 DSG3P32926 999 aa12.39□□□□□ -0.43
CDK4-213ENST00000552713 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
CDK4-213ENST00000552713 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
CDK4-213ENST00000552713 BTAF1O14981 1849 aa12.39□□□□□ -0.43
CDK4-213ENST00000552713 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
CDK4-213ENST00000552713 WDR17Q8IZU2 1322 aa12.38□□□□□ -0.43
CDK4-213ENST00000552713 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
CDK4-213ENST00000552713 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
CDK4-213ENST00000552713 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
CDK4-213ENST00000552713 KCNA4P22459 653 aa12.37□□□□□ -0.43
CDK4-213ENST00000552713 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
CDK4-213ENST00000552713 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
CDK4-213ENST00000552713 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
CDK4-213ENST00000552713 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
CDK4-213ENST00000552713 SENP3-EIF4A1A0A087X0R7 540 aa12.36□□□□□ -0.43
CDK4-213ENST00000552713 SOX12O15370 315 aa12.36□□□□□ -0.43
CDK4-213ENST00000552713 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
CDK4-213ENST00000552713 UTRNP46939 3433 aa12.36□□□□□ -0.43
CDK4-213ENST00000552713 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
CDK4-213ENST00000552713 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
CDK4-213ENST00000552713 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
CDK4-213ENST00000552713 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
CDK4-213ENST00000552713 NFAT5O94916 1531 aa12.35□□□□□ -0.43
CDK4-213ENST00000552713 LTN1O94822 1766 aa12.34□□□□□ -0.43
CDK4-213ENST00000552713 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
CDK4-213ENST00000552713 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
CDK4-213ENST00000552713 ACSBG1Q96GR2 724 aa12.34□□□□□ -0.43
CDK4-213ENST00000552713 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
CDK4-213ENST00000552713 CARD10Q9BWT7 1032 aa12.34□□□□□ -0.43
CDK4-213ENST00000552713 COL24A1Q17RW2 1714 aa12.34□□□□□ -0.43
CDK4-213ENST00000552713 EXOC5O00471 708 aa12.33□□□□□ -0.44
CDK4-213ENST00000552713 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
CDK4-213ENST00000552713 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
CDK4-213ENST00000552713 QSER1Q2KHR3 1735 aa12.32□□□□□ -0.44
CDK4-213ENST00000552713 ZNF827Q17R98 1081 aa12.32□□□□□ -0.44
CDK4-213ENST00000552713 ARXQ96QS3 562 aa12.32□□□□□ -0.44
CDK4-213ENST00000552713 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
CDK4-213ENST00000552713 ABCC6O95255 1503 aa12.31□□□□□ -0.44
CDK4-213ENST00000552713 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
CDK4-213ENST00000552713 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
CDK4-213ENST00000552713 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
CDK4-213ENST00000552713 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
CDK4-213ENST00000552713 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
CDK4-213ENST00000552713 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
CDK4-213ENST00000552713 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
CDK4-213ENST00000552713 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
CDK4-213ENST00000552713 CAPN15O75808 1086 aa12.28□□□□□ -0.44
CDK4-213ENST00000552713 GPR162Q16538 588 aa12.27□□□□□ -0.45
CDK4-213ENST00000552713 EVC2Q86UK5 1308 aa12.27□□□□□ -0.45
CDK4-213ENST00000552713 RGPD2P0DJD1 1756 aa12.27□□□□□ -0.45
CDK4-213ENST00000552713 KCNQ4P56696 695 aa12.26□□□□□ -0.45
CDK4-213ENST00000552713 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CDK4-213ENST00000552713 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
CDK4-213ENST00000552713 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
CDK4-213ENST00000552713 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
CDK4-213ENST00000552713 LY75O60449 1722 aa12.25□□□□□ -0.45
CDK4-213ENST00000552713 NLGN2Q8NFZ4 835 aa12.25□□□□□ -0.45
CDK4-213ENST00000552713 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
CDK4-213ENST00000552713 ERBB3P21860 1342 aa12.25□□□□□ -0.45
CDK4-213ENST00000552713 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
CDK4-213ENST00000552713 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
CDK4-213ENST00000552713 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
CDK4-213ENST00000552713 IL2RBP14784 551 aa12.24□□□□□ -0.45
CDK4-213ENST00000552713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDK4-213ENST00000552713 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
CDK4-213ENST00000552713 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
CDK4-213ENST00000552713 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
CDK4-213ENST00000552713 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms