RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 PAPPAQ13219 1627 aa18.77■□□□□ 0.6
SNRPF-204ENST00000552085 MINK1Q8N4C8 1332 aaPredicted RBP18.76■□□□□ 0.59
SNRPF-204ENST00000552085 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
SNRPF-204ENST00000552085 WASLO00401 505 aaPredicted RBP18.75■□□□□ 0.59
SNRPF-204ENST00000552085 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
SNRPF-204ENST00000552085 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
SNRPF-204ENST00000552085 QSER1Q2KHR3 1735 aa18.72■□□□□ 0.59
SNRPF-204ENST00000552085 NLGN2Q8NFZ4 835 aa18.71■□□□□ 0.59
SNRPF-204ENST00000552085 CAPN15O75808 1086 aa18.7■□□□□ 0.58
SNRPF-204ENST00000552085 YBX3P16989 372 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNRPF-204ENST00000552085 POLD1P28340 1107 aa18.7■□□□□ 0.58
SNRPF-204ENST00000552085 USP19O94966 1318 aa18.7■□□□□ 0.58
SNRPF-204ENST00000552085 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
SNRPF-204ENST00000552085 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
SNRPF-204ENST00000552085 TRAK1Q9UPV9 953 aa18.68■□□□□ 0.58
SNRPF-204ENST00000552085 GOLGB1Q14789 3259 aaKnown RBP18.68■□□□□ 0.58
SNRPF-204ENST00000552085 TOM1L2Q6ZVM7 507 aa18.67■□□□□ 0.58
SNRPF-204ENST00000552085 SLC16A10Q8TF71 515 aa18.67■□□□□ 0.58
SNRPF-204ENST00000552085 NUDT16Q96DE0 195 aaKnown RBP18.67■□□□□ 0.58
SNRPF-204ENST00000552085 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
SNRPF-204ENST00000552085 ADGRB1O14514 1584 aa18.67■□□□□ 0.58
SNRPF-204ENST00000552085 GCP02774 474 aa18.66■□□□□ 0.58
SNRPF-204ENST00000552085 ZNF827Q17R98 1081 aa18.66■□□□□ 0.58
SNRPF-204ENST00000552085 ZNF526Q8TF50 670 aaPredicted RBP18.66■□□□□ 0.58
SNRPF-204ENST00000552085 POLR3AO14802 1390 aaPredicted RBP18.66■□□□□ 0.58
SNRPF-204ENST00000552085 ADCY9O60503 1353 aa18.66■□□□□ 0.58
SNRPF-204ENST00000552085 APLP1P51693 650 aa18.65■□□□□ 0.58
SNRPF-204ENST00000552085 COL13A1Q5TAT6 717 aaPredicted RBP18.64■□□□□ 0.57
SNRPF-204ENST00000552085 BTAF1O14981 1849 aa18.64■□□□□ 0.57
SNRPF-204ENST00000552085 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
SNRPF-204ENST00000552085 COL18A1P39060 1754 aa18.63■□□□□ 0.57
SNRPF-204ENST00000552085 PRELPP51888 382 aa18.63■□□□□ 0.57
SNRPF-204ENST00000552085 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
SNRPF-204ENST00000552085 DNAJC5GQ8N7S2 189 aa18.63■□□□□ 0.57
SNRPF-204ENST00000552085 ACEP12821 1306 aa18.63■□□□□ 0.57
SNRPF-204ENST00000552085 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
SNRPF-204ENST00000552085 RGPD5Q99666 1765 aa18.6■□□□□ 0.57
SNRPF-204ENST00000552085 ARHGEF28Q8N1W1 1705 aaKnown RBP18.6■□□□□ 0.57
SNRPF-204ENST00000552085 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
SNRPF-204ENST00000552085 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
SNRPF-204ENST00000552085 EXOC5O00471 708 aa18.59■□□□□ 0.57
SNRPF-204ENST00000552085 KIF3CO14782 793 aa18.58■□□□□ 0.56
SNRPF-204ENST00000552085 TNS4Q8IZW8 715 aa18.58■□□□□ 0.56
SNRPF-204ENST00000552085 AKT1S1Q96B36 256 aa18.58■□□□□ 0.56
SNRPF-204ENST00000552085 WDR90Q96KV7 1748 aa18.57■□□□□ 0.56
SNRPF-204ENST00000552085 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
SNRPF-204ENST00000552085 LRRC4BQ9NT99 713 aa18.57■□□□□ 0.56
SNRPF-204ENST00000552085 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
SNRPF-204ENST00000552085 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
SNRPF-204ENST00000552085 SLC34A2O95436 690 aa18.56■□□□□ 0.56
SNRPF-204ENST00000552085 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
SNRPF-204ENST00000552085 TNS2Q63HR2 1409 aa18.56■□□□□ 0.56
SNRPF-204ENST00000552085 CCDC61Q9Y6R9 512 aa18.55■□□□□ 0.56
SNRPF-204ENST00000552085 USP6P35125 1406 aa18.55■□□□□ 0.56
SNRPF-204ENST00000552085 SLIT3O75094 1523 aa18.54■□□□□ 0.56
SNRPF-204ENST00000552085 MSH5O43196 834 aa18.54■□□□□ 0.56
SNRPF-204ENST00000552085 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
SNRPF-204ENST00000552085 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
SNRPF-204ENST00000552085 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
SNRPF-204ENST00000552085 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
SNRPF-204ENST00000552085 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
SNRPF-204ENST00000552085 TFCP2L1Q9NZI6 479 aa18.52■□□□□ 0.56
SNRPF-204ENST00000552085 ABCC6O95255 1503 aa18.52■□□□□ 0.56
SNRPF-204ENST00000552085 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
SNRPF-204ENST00000552085 MPHOSPH9Q99550 1183 aa18.51■□□□□ 0.55
SNRPF-204ENST00000552085 ADRA2BP18089 450 aa18.5■□□□□ 0.55
SNRPF-204ENST00000552085 CSB-PGBD3P0DP91 1061 aa18.49■□□□□ 0.55
SNRPF-204ENST00000552085 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
SNRPF-204ENST00000552085 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
SNRPF-204ENST00000552085 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
SNRPF-204ENST00000552085 NLRP6P59044 892 aa18.48■□□□□ 0.55
SNRPF-204ENST00000552085 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
SNRPF-204ENST00000552085 TOMM70O94826 608 aa18.47■□□□□ 0.55
SNRPF-204ENST00000552085 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
SNRPF-204ENST00000552085 PPIP5K1Q6PFW1 1433 aa18.47■□□□□ 0.55
SNRPF-204ENST00000552085 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
SNRPF-204ENST00000552085 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
SNRPF-204ENST00000552085 PIK3C2AO00443 1686 aa18.45■□□□□ 0.54
SNRPF-204ENST00000552085 LY75O60449 1722 aa18.44■□□□□ 0.54
SNRPF-204ENST00000552085 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
SNRPF-204ENST00000552085 KCNQ4P56696 695 aa18.41■□□□□ 0.54
SNRPF-204ENST00000552085 MSL1Q68DK7 614 aa18.4■□□□□ 0.54
SNRPF-204ENST00000552085 WWC3Q9ULE0 1092 aa18.4■□□□□ 0.54
SNRPF-204ENST00000552085 QRICH2Q9H0J4 1663 aa18.39■□□□□ 0.53
SNRPF-204ENST00000552085 HTRA3P83110 453 aa18.39■□□□□ 0.53
SNRPF-204ENST00000552085 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
SNRPF-204ENST00000552085 CICQ96RK0 1608 aaPredicted RBP18.38■□□□□ 0.53
SNRPF-204ENST00000552085 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
SNRPF-204ENST00000552085 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
SNRPF-204ENST00000552085 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
SNRPF-204ENST00000552085 PCDH10Q9P2E7 1040 aa18.36■□□□□ 0.53
SNRPF-204ENST00000552085 IL2RBP14784 551 aa18.35■□□□□ 0.53
SNRPF-204ENST00000552085 RBM46Q8TBY0 533 aaKnown RBP18.35■□□□□ 0.53
SNRPF-204ENST00000552085 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
SNRPF-204ENST00000552085 DOT1LQ8TEK3 1739 aa18.34■□□□□ 0.53
SNRPF-204ENST00000552085 SOX12O15370 315 aa18.33■□□□□ 0.52
SNRPF-204ENST00000552085 DCAF11Q8TEB1 546 aa18.33■□□□□ 0.52
SNRPF-204ENST00000552085 NMRK2Q9NPI5 230 aa18.33■□□□□ 0.52
SNRPF-204ENST00000552085 NFAT5O94916 1531 aa18.33■□□□□ 0.52
SNRPF-204ENST00000552085 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms