RNA–Protein interactions for RNA: ENST00000551442.5

PPFIA2-223, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-223ENST00000551442 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
PPFIA2-223ENST00000551442 C11orf95C9JLR9 678 aaPredicted RBP18.65■□□□□ 0.58
PPFIA2-223ENST00000551442 SGIP1Q9BQI5 828 aa18.65■□□□□ 0.58
PPFIA2-223ENST00000551442 NLRP13Q86W25 1043 aa18.64■□□□□ 0.57
PPFIA2-223ENST00000551442 AXIN2Q9Y2T1 843 aa18.64■□□□□ 0.57
PPFIA2-223ENST00000551442 TXNRD1Q16881 649 aa18.63■□□□□ 0.57
PPFIA2-223ENST00000551442 SLC15A2Q16348 729 aa18.62■□□□□ 0.57
PPFIA2-223ENST00000551442 TOM1L2Q6ZVM7 507 aa18.61■□□□□ 0.57
PPFIA2-223ENST00000551442 AATKQ6ZMQ8 1374 aa18.6■□□□□ 0.57
PPFIA2-223ENST00000551442 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
PPFIA2-223ENST00000551442 STK32BQ9NY57 414 aa18.6■□□□□ 0.57
PPFIA2-223ENST00000551442 MTFR1LQ9H019 292 aa18.59■□□□□ 0.57
PPFIA2-223ENST00000551442 GOLGB1Q14789 3259 aaKnown RBP18.58■□□□□ 0.57
PPFIA2-223ENST00000551442 CEP350Q5VT06 3117 aa18.58■□□□□ 0.56
PPFIA2-223ENST00000551442 COL18A1P39060 1754 aa18.58■□□□□ 0.56
PPFIA2-223ENST00000551442 BCL9O00512 1426 aa18.57■□□□□ 0.56
PPFIA2-223ENST00000551442 PPIP5K1Q6PFW1 1433 aa18.57■□□□□ 0.56
PPFIA2-223ENST00000551442 CHD4Q14839 1912 aa18.57■□□□□ 0.56
PPFIA2-223ENST00000551442 NLRP6P59044 892 aa18.57■□□□□ 0.56
PPFIA2-223ENST00000551442 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
PPFIA2-223ENST00000551442 WDR17Q8IZU2 1322 aa18.55■□□□□ 0.56
PPFIA2-223ENST00000551442 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
PPFIA2-223ENST00000551442 ARXQ96QS3 562 aa18.55■□□□□ 0.56
PPFIA2-223ENST00000551442 RAB3GAP2Q9H2M9 1393 aa18.55■□□□□ 0.56
PPFIA2-223ENST00000551442 SLIT3O75094 1523 aa18.54■□□□□ 0.56
PPFIA2-223ENST00000551442 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
PPFIA2-223ENST00000551442 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
PPFIA2-223ENST00000551442 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
PPFIA2-223ENST00000551442 CABP1Q9NZU7 370 aa18.53■□□□□ 0.56
PPFIA2-223ENST00000551442 USP6P35125 1406 aa18.52■□□□□ 0.56
PPFIA2-223ENST00000551442 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
PPFIA2-223ENST00000551442 ARHGEF25Q86VW2 580 aa18.51■□□□□ 0.55
PPFIA2-223ENST00000551442 ACSBG1Q96GR2 724 aa18.51■□□□□ 0.55
PPFIA2-223ENST00000551442 EXOC5O00471 708 aa18.5■□□□□ 0.55
PPFIA2-223ENST00000551442 ZNF827Q17R98 1081 aa18.5■□□□□ 0.55
PPFIA2-223ENST00000551442 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
PPFIA2-223ENST00000551442 CARD10Q9BWT7 1032 aa18.5■□□□□ 0.55
PPFIA2-223ENST00000551442 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
PPFIA2-223ENST00000551442 GPR162Q16538 588 aa18.49■□□□□ 0.55
PPFIA2-223ENST00000551442 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
PPFIA2-223ENST00000551442 CPSF1Q10570 1443 aaKnown RBP18.49■□□□□ 0.55
PPFIA2-223ENST00000551442 PIK3C2AO00443 1686 aa18.48■□□□□ 0.55
PPFIA2-223ENST00000551442 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
PPFIA2-223ENST00000551442 SOX12O15370 315 aa18.48■□□□□ 0.55
PPFIA2-223ENST00000551442 LRRC4BQ9NT99 713 aa18.48■□□□□ 0.55
PPFIA2-223ENST00000551442 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
PPFIA2-223ENST00000551442 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
PPFIA2-223ENST00000551442 PAPPAQ13219 1627 aa18.47■□□□□ 0.55
PPFIA2-223ENST00000551442 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
PPFIA2-223ENST00000551442 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
PPFIA2-223ENST00000551442 TNS2Q63HR2 1409 aa18.43■□□□□ 0.54
PPFIA2-223ENST00000551442 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
PPFIA2-223ENST00000551442 NLGN2Q8NFZ4 835 aa18.43■□□□□ 0.54
PPFIA2-223ENST00000551442 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
PPFIA2-223ENST00000551442 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
PPFIA2-223ENST00000551442 TTC21BQ7Z4L5 1316 aa18.42■□□□□ 0.54
PPFIA2-223ENST00000551442 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
PPFIA2-223ENST00000551442 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
PPFIA2-223ENST00000551442 CCDC7Q96M83 1385 aa18.4■□□□□ 0.54
PPFIA2-223ENST00000551442 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
PPFIA2-223ENST00000551442 KCNQ4P56696 695 aa18.39■□□□□ 0.53
PPFIA2-223ENST00000551442 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
PPFIA2-223ENST00000551442 BTAF1O14981 1849 aa18.39■□□□□ 0.53
PPFIA2-223ENST00000551442 NFAT5O94916 1531 aa18.39■□□□□ 0.53
PPFIA2-223ENST00000551442 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
PPFIA2-223ENST00000551442 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
PPFIA2-223ENST00000551442 QRICH2Q9H0J4 1663 aa18.37■□□□□ 0.53
PPFIA2-223ENST00000551442 ABCC6O95255 1503 aa18.36■□□□□ 0.53
PPFIA2-223ENST00000551442 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
PPFIA2-223ENST00000551442 NLRP2Q9NX02 1062 aa18.35■□□□□ 0.53
PPFIA2-223ENST00000551442 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
PPFIA2-223ENST00000551442 IL2RBP14784 551 aa18.34■□□□□ 0.53
PPFIA2-223ENST00000551442 POLD1P28340 1107 aa18.34■□□□□ 0.53
PPFIA2-223ENST00000551442 ERBB3P21860 1342 aa18.33■□□□□ 0.53
PPFIA2-223ENST00000551442 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
PPFIA2-223ENST00000551442 KAT6BQ8WYB5 2073 aa18.33■□□□□ 0.52
PPFIA2-223ENST00000551442 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
PPFIA2-223ENST00000551442 TFCP2L1Q9NZI6 479 aa18.31■□□□□ 0.52
PPFIA2-223ENST00000551442 TUBGCP6Q96RT7 1819 aa18.3■□□□□ 0.52
PPFIA2-223ENST00000551442 EVC2Q86UK5 1308 aa18.3■□□□□ 0.52
PPFIA2-223ENST00000551442 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
PPFIA2-223ENST00000551442 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
PPFIA2-223ENST00000551442 SLC27A3Q5K4L6 730 aa18.29■□□□□ 0.52
PPFIA2-223ENST00000551442 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
PPFIA2-223ENST00000551442 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
PPFIA2-223ENST00000551442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.52
PPFIA2-223ENST00000551442 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
PPFIA2-223ENST00000551442 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
PPFIA2-223ENST00000551442 GRIN3BO60391 1043 aa18.27■□□□□ 0.52
PPFIA2-223ENST00000551442 NME9Q86XW9 330 aa18.27■□□□□ 0.52
PPFIA2-223ENST00000551442 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
PPFIA2-223ENST00000551442 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
PPFIA2-223ENST00000551442 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
PPFIA2-223ENST00000551442 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
PPFIA2-223ENST00000551442 HSPA6P17066 643 aa18.24■□□□□ 0.51
PPFIA2-223ENST00000551442 ZNF526Q8TF50 670 aaPredicted RBP18.24■□□□□ 0.51
PPFIA2-223ENST00000551442 SYTL4Q96C24 671 aaPredicted RBP18.24■□□□□ 0.51
PPFIA2-223ENST00000551442 NSD2O96028 1365 aa18.24■□□□□ 0.51
PPFIA2-223ENST00000551442 GPBP1L1Q9HC44 474 aaPredicted RBP18.22■□□□□ 0.51
PPFIA2-223ENST00000551442 LTN1O94822 1766 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms