RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 RRS1Q15050 365 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-213ENST00000551269 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
PRPF40B-213ENST00000551269 MYBBP1AQ9BQG0 1328 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-213ENST00000551269 CAMTA1Q9Y6Y1 1673 aa15.83■□□□□ 0.13
PRPF40B-213ENST00000551269 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-213ENST00000551269 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-213ENST00000551269 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
PRPF40B-213ENST00000551269 C8orf37Q96NL8 207 aa15.82■□□□□ 0.12
PRPF40B-213ENST00000551269 COL5A2P05997 1499 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-213ENST00000551269 CHRNA2Q15822 529 aa15.81■□□□□ 0.12
PRPF40B-213ENST00000551269 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
PRPF40B-213ENST00000551269 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
PRPF40B-213ENST00000551269 PARP4Q9UKK3 1724 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-213ENST00000551269 SLIT2O94813 1529 aa15.8■□□□□ 0.12
PRPF40B-213ENST00000551269 FBLN1P23142 703 aa15.8■□□□□ 0.12
PRPF40B-213ENST00000551269 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
PRPF40B-213ENST00000551269 HOXC9P31274 260 aa15.79■□□□□ 0.12
PRPF40B-213ENST00000551269 CFAP53Q96M91 514 aa15.79■□□□□ 0.12
PRPF40B-213ENST00000551269 POLKQ9UBT6 870 aa15.79■□□□□ 0.12
PRPF40B-213ENST00000551269 COL3A1P02461 1466 aaPredicted RBP15.78■□□□□ 0.12
PRPF40B-213ENST00000551269 INSRP06213 1382 aa15.78■□□□□ 0.12
PRPF40B-213ENST00000551269 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
PRPF40B-213ENST00000551269 MTHFSP49914 203 aa15.77■□□□□ 0.12
PRPF40B-213ENST00000551269 IP6K1Q92551 441 aa15.77■□□□□ 0.12
PRPF40B-213ENST00000551269 FAM83GA6ND36 823 aa15.76■□□□□ 0.11
PRPF40B-213ENST00000551269 BTG4Q9NY30 223 aa15.76■□□□□ 0.11
PRPF40B-213ENST00000551269 ERBB3P21860 1342 aa15.75■□□□□ 0.11
PRPF40B-213ENST00000551269 AFF2P51816 1311 aa15.75■□□□□ 0.11
PRPF40B-213ENST00000551269 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
PRPF40B-213ENST00000551269 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-213ENST00000551269 STRN4Q9NRL3 753 aa15.75■□□□□ 0.11
PRPF40B-213ENST00000551269 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-213ENST00000551269 EVA1CP58658 441 aa15.74■□□□□ 0.11
PRPF40B-213ENST00000551269 ANKRD24Q8TF21 1146 aa15.74■□□□□ 0.11
PRPF40B-213ENST00000551269 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-213ENST00000551269 CRB1P82279 1406 aa15.74■□□□□ 0.11
PRPF40B-213ENST00000551269 HSP90AB2PQ58FF8 381 aa15.73■□□□□ 0.11
PRPF40B-213ENST00000551269 USP21Q9UK80 565 aa15.73■□□□□ 0.11
PRPF40B-213ENST00000551269 WDR17Q8IZU2 1322 aa15.72■□□□□ 0.11
PRPF40B-213ENST00000551269 BCL9LQ86UU0 1499 aa15.71■□□□□ 0.11
PRPF40B-213ENST00000551269 UNC5CLQ8IV45 518 aa15.71■□□□□ 0.11
PRPF40B-213ENST00000551269 FNBP4Q8N3X1 1017 aaPredicted RBP15.71■□□□□ 0.11
PRPF40B-213ENST00000551269 AXIN2Q9Y2T1 843 aa15.71■□□□□ 0.11
PRPF40B-213ENST00000551269 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
PRPF40B-213ENST00000551269 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.1
PRPF40B-213ENST00000551269 GLI3P10071 1580 aa15.7■□□□□ 0.1
PRPF40B-213ENST00000551269 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
PRPF40B-213ENST00000551269 DIAPH1O60610 1272 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-213ENST00000551269 EIF4A2Q14240 407 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-213ENST00000551269 TOM1L2Q6ZVM7 507 aa15.7■□□□□ 0.1
PRPF40B-213ENST00000551269 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
PRPF40B-213ENST00000551269 ATRNO75882 1429 aa15.69■□□□□ 0.1
PRPF40B-213ENST00000551269 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
PRPF40B-213ENST00000551269 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
PRPF40B-213ENST00000551269 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
PRPF40B-213ENST00000551269 THSD7AQ9UPZ6 1657 aa15.68■□□□□ 0.1
PRPF40B-213ENST00000551269 NLRP2Q9NX02 1062 aa15.68■□□□□ 0.1
PRPF40B-213ENST00000551269 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-213ENST00000551269 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
PRPF40B-213ENST00000551269 BRWD3Q6RI45 1802 aa15.67■□□□□ 0.1
PRPF40B-213ENST00000551269 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-213ENST00000551269 WDR43Q15061 677 aaKnown RBP eCLIP15.67■□□□□ 0.1
PRPF40B-213ENST00000551269 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-213ENST00000551269 NCAPD2Q15021 1401 aa15.67■□□□□ 0.1
PRPF40B-213ENST00000551269 VPS72Q15906 364 aa15.66■□□□□ 0.1
PRPF40B-213ENST00000551269 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
PRPF40B-213ENST00000551269 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
PRPF40B-213ENST00000551269 IL13P35225 146 aa15.65■□□□□ 0.1
PRPF40B-213ENST00000551269 MIER1Q8N108 512 aa15.65■□□□□ 0.1
PRPF40B-213ENST00000551269 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
PRPF40B-213ENST00000551269 CARD10Q9BWT7 1032 aa15.64■□□□□ 0.09
PRPF40B-213ENST00000551269 SPATA31A1Q5TZJ5 1347 aa15.64■□□□□ 0.09
PRPF40B-213ENST00000551269 SPATA31A5Q5VU36 1347 aa15.64■□□□□ 0.09
PRPF40B-213ENST00000551269 SPATA31A7Q8IWB4 1347 aa15.64■□□□□ 0.09
PRPF40B-213ENST00000551269 U2AF1L5P0DN76 240 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-213ENST00000551269 U2AF1Q01081 240 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRPF40B-213ENST00000551269 USHBP1Q8N6Y0 703 aa15.63■□□□□ 0.09
PRPF40B-213ENST00000551269 EYA1Q99502 592 aa15.63■□□□□ 0.09
PRPF40B-213ENST00000551269 MEGF6O75095 1541 aa15.63■□□□□ 0.09
PRPF40B-213ENST00000551269 TCP11L2Q8N4U5 519 aa15.62■□□□□ 0.09
PRPF40B-213ENST00000551269 THRAP3Q9Y2W1 955 aaKnown RBP15.62■□□□□ 0.09
PRPF40B-213ENST00000551269 KDRP35968 1356 aa15.62■□□□□ 0.09
PRPF40B-213ENST00000551269 A0A0G2JS52 829 aa15.61■□□□□ 0.09
PRPF40B-213ENST00000551269 MYT1Q01538 1121 aa15.61■□□□□ 0.09
PRPF40B-213ENST00000551269 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
PRPF40B-213ENST00000551269 RAPGEF4Q8WZA2 1011 aa15.61■□□□□ 0.09
PRPF40B-213ENST00000551269 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
PRPF40B-213ENST00000551269 QTRT2Q9H974 415 aaKnown RBP15.61■□□□□ 0.09
PRPF40B-213ENST00000551269 DISP2A7MBM2 1401 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 TNS2Q63HR2 1409 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 KAT6BQ8WYB5 2073 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 NEFMP07197 916 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 HMOX1P09601 288 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 SULT6B1Q6IMI4 303 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 GJD4Q96KN9 370 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 PLEKHG2Q9H7P9 1386 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 DOT1LQ8TEK3 1739 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
PRPF40B-213ENST00000551269 IL2RBP14784 551 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms