RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 A0A0G2JS52 829 aa21.35■■□□□ 1.01
PRPF40B-211ENST00000551063 MYT1Q01538 1121 aa21.35■■□□□ 1.01
PRPF40B-211ENST00000551063 POLR3GLQ9BT43 218 aa21.35■■□□□ 1.01
PRPF40B-211ENST00000551063 COL18A1P39060 1754 aa21.33■■□□□ 1.01
PRPF40B-211ENST00000551063 FYB1O15117 783 aa21.33■■□□□ 1.01
PRPF40B-211ENST00000551063 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1.01
PRPF40B-211ENST00000551063 LARP1Q6PKG0 1096 aaKnown RBP21.33■■□□□ 1.01
PRPF40B-211ENST00000551063 CARD14Q9BXL6 1004 aa21.33■■□□□ 1.01
PRPF40B-211ENST00000551063 BRWD3Q6RI45 1802 aa21.32■■□□□ 1
PRPF40B-211ENST00000551063 CRB1P82279 1406 aa21.32■■□□□ 1
PRPF40B-211ENST00000551063 C11orf95C9JLR9 678 aaPredicted RBP21.31■■□□□ 1
PRPF40B-211ENST00000551063 BARGINQ6ZT62 677 aa21.31■■□□□ 1
PRPF40B-211ENST00000551063 AXIN2Q9Y2T1 843 aa21.31■■□□□ 1
PRPF40B-211ENST00000551063 WDR17Q8IZU2 1322 aa21.3■■□□□ 1
PRPF40B-211ENST00000551063 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
PRPF40B-211ENST00000551063 GGNBP2Q9H3C7 697 aa21.3■■□□□ 1
PRPF40B-211ENST00000551063 THRAP3Q9Y2W1 955 aaKnown RBP21.3■■□□□ 1
PRPF40B-211ENST00000551063 THSD7AQ9UPZ6 1657 aa21.3■■□□□ 1
PRPF40B-211ENST00000551063 EP400Q96L91 3159 aa21.3■■□□□ 1
PRPF40B-211ENST00000551063 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
PRPF40B-211ENST00000551063 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
PRPF40B-211ENST00000551063 DEFB132Q7Z7B7 95 aa21.27■■□□□ 1
PRPF40B-211ENST00000551063 USP35Q9P2H5 1018 aa21.27■■□□□ 1
PRPF40B-211ENST00000551063 TOM1L2Q6ZVM7 507 aa21.26■□□□□ 0.99
PRPF40B-211ENST00000551063 ERBB3P21860 1342 aa21.26■□□□□ 0.99
PRPF40B-211ENST00000551063 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
PRPF40B-211ENST00000551063 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
PRPF40B-211ENST00000551063 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
PRPF40B-211ENST00000551063 PANK3Q9H999 370 aa21.25■□□□□ 0.99
PRPF40B-211ENST00000551063 KIF20BQ96Q89 1820 aa21.25■□□□□ 0.99
PRPF40B-211ENST00000551063 BAG6P46379 1132 aa21.24■□□□□ 0.99
PRPF40B-211ENST00000551063 IP6K1Q92551 441 aa21.24■□□□□ 0.99
PRPF40B-211ENST00000551063 CARD10Q9BWT7 1032 aa21.24■□□□□ 0.99
PRPF40B-211ENST00000551063 NSD2O96028 1365 aa21.23■□□□□ 0.99
PRPF40B-211ENST00000551063 CCDC7Q96M83 1385 aa21.23■□□□□ 0.99
PRPF40B-211ENST00000551063 LTN1O94822 1766 aa21.22■□□□□ 0.99
PRPF40B-211ENST00000551063 KIF24Q5T7B8 1368 aa21.22■□□□□ 0.99
PRPF40B-211ENST00000551063 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
PRPF40B-211ENST00000551063 CDCA7Q9BWT1 371 aaPredicted RBP21.21■□□□□ 0.99
PRPF40B-211ENST00000551063 HOXC9P31274 260 aa21.2■□□□□ 0.98
PRPF40B-211ENST00000551063 AMPHP49418 695 aa21.2■□□□□ 0.98
PRPF40B-211ENST00000551063 FBLN1P23142 703 aa21.19■□□□□ 0.98
PRPF40B-211ENST00000551063 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
PRPF40B-211ENST00000551063 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
PRPF40B-211ENST00000551063 DISP2A7MBM2 1401 aa21.18■□□□□ 0.98
PRPF40B-211ENST00000551063 FAM182BQ5T319 152 aa21.17■□□□□ 0.98
PRPF40B-211ENST00000551063 FLT4P35916 1363 aa21.17■□□□□ 0.98
PRPF40B-211ENST00000551063 PARP4Q9UKK3 1724 aaKnown RBP21.16■□□□□ 0.98
PRPF40B-211ENST00000551063 NLRP2Q9NX02 1062 aa21.16■□□□□ 0.98
PRPF40B-211ENST00000551063 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
PRPF40B-211ENST00000551063 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
PRPF40B-211ENST00000551063 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
PRPF40B-211ENST00000551063 FAM196AQ6ZSG2 479 aa21.15■□□□□ 0.98
PRPF40B-211ENST00000551063 INSRP06213 1382 aa21.14■□□□□ 0.98
PRPF40B-211ENST00000551063 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
PRPF40B-211ENST00000551063 DDB1Q16531 1140 aa21.13■□□□□ 0.97
PRPF40B-211ENST00000551063 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
PRPF40B-211ENST00000551063 LRRC37A3O60309 1634 aa21.12■□□□□ 0.97
PRPF40B-211ENST00000551063 EN1Q05925 392 aaPredicted RBP21.12■□□□□ 0.97
PRPF40B-211ENST00000551063 LTV1Q96GA3 475 aaPredicted RBP21.12■□□□□ 0.97
PRPF40B-211ENST00000551063 EMILIN1Q9Y6C2 1016 aa21.12■□□□□ 0.97
PRPF40B-211ENST00000551063 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
PRPF40B-211ENST00000551063 WNK3Q9BYP7 1800 aa21.11■□□□□ 0.97
PRPF40B-211ENST00000551063 AMER1Q5JTC6 1135 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-211ENST00000551063 RGPD1P0DJD0 1748 aa21.11■□□□□ 0.97
PRPF40B-211ENST00000551063 TNS2Q63HR2 1409 aa21.11■□□□□ 0.97
PRPF40B-211ENST00000551063 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
PRPF40B-211ENST00000551063 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
PRPF40B-211ENST00000551063 IL2RBP14784 551 aa21.09■□□□□ 0.97
PRPF40B-211ENST00000551063 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
PRPF40B-211ENST00000551063 OVOS2A0A0G2JMS6 1433 aa21.09■□□□□ 0.97
PRPF40B-211ENST00000551063 TRIM37O94972 964 aa21.08■□□□□ 0.97
PRPF40B-211ENST00000551063 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
PRPF40B-211ENST00000551063 MORC1Q86VD1 984 aa21.07■□□□□ 0.96
PRPF40B-211ENST00000551063 SRCAPQ6ZRS2 3230 aa21.06■□□□□ 0.96
PRPF40B-211ENST00000551063 BCL9O00512 1426 aa21.06■□□□□ 0.96
PRPF40B-211ENST00000551063 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
PRPF40B-211ENST00000551063 EXOC5O00471 708 aa21.06■□□□□ 0.96
PRPF40B-211ENST00000551063 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
PRPF40B-211ENST00000551063 APBA3O96018 575 aa21.05■□□□□ 0.96
PRPF40B-211ENST00000551063 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
PRPF40B-211ENST00000551063 PPM1GO15355 546 aaPredicted RBP21.04■□□□□ 0.96
PRPF40B-211ENST00000551063 EZH2Q15910 746 aaKnown RBP21.04■□□□□ 0.96
PRPF40B-211ENST00000551063 CAMKK2Q96RR4 588 aa21.04■□□□□ 0.96
PRPF40B-211ENST00000551063 PARD3Q8TEW0 1356 aa21.03■□□□□ 0.96
PRPF40B-211ENST00000551063 ZEB1P37275 1124 aaPredicted RBP21.03■□□□□ 0.96
PRPF40B-211ENST00000551063 NBPF6Q5VWK0 638 aa21.03■□□□□ 0.96
PRPF40B-211ENST00000551063 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
PRPF40B-211ENST00000551063 NBPF4Q96M43 638 aa21.03■□□□□ 0.96
PRPF40B-211ENST00000551063 NCAPD2Q15021 1401 aa21.01■□□□□ 0.95
PRPF40B-211ENST00000551063 TNS1Q9HBL0 1735 aaKnown RBP21.01■□□□□ 0.95
PRPF40B-211ENST00000551063 MEGF6O75095 1541 aa21■□□□□ 0.95
PRPF40B-211ENST00000551063 R3HDM1Q15032 1099 aaKnown RBP21■□□□□ 0.95
PRPF40B-211ENST00000551063 LRP5O75197 1615 aa20.98■□□□□ 0.95
PRPF40B-211ENST00000551063 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
PRPF40B-211ENST00000551063 RAPGEF4Q8WZA2 1011 aa20.98■□□□□ 0.95
PRPF40B-211ENST00000551063 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-211ENST00000551063 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-211ENST00000551063 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
PRPF40B-211ENST00000551063 TATP17735 454 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms