RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 TK2O00142 265 aa8.55□□□□□ -1.04
PTPRR-210ENST00000550661 COL9A1P20849 921 aa8.55□□□□□ -1.04
PTPRR-210ENST00000550661 HSPA2P54652 639 aa8.55□□□□□ -1.04
PTPRR-210ENST00000550661 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
PTPRR-210ENST00000550661 ANKLE2Q86XL3 938 aa8.55□□□□□ -1.04
PTPRR-210ENST00000550661 SIN3AQ96ST3 1273 aa8.55□□□□□ -1.04
PTPRR-210ENST00000550661 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
PTPRR-210ENST00000550661 PRAG1Q86YV5 1406 aa8.54□□□□□ -1.04
PTPRR-210ENST00000550661 NRXN3Q9Y4C0 1643 aa8.54□□□□□ -1.04
PTPRR-210ENST00000550661 STRCQ7RTU9 1775 aa8.54□□□□□ -1.04
PTPRR-210ENST00000550661 NEUROD1Q13562 356 aa8.54□□□□□ -1.04
PTPRR-210ENST00000550661 RGL3Q3MIN7 710 aa8.54□□□□□ -1.04
PTPRR-210ENST00000550661 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
PTPRR-210ENST00000550661 LTKP29376 864 aa8.53□□□□□ -1.04
PTPRR-210ENST00000550661 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
PTPRR-210ENST00000550661 VPS9D1Q9Y2B5 631 aa8.53□□□□□ -1.04
PTPRR-210ENST00000550661 ADAMTS13Q76LX8 1427 aa8.53□□□□□ -1.04
PTPRR-210ENST00000550661 TESPA1A2RU30 521 aaPredicted RBP8.52□□□□□ -1.05
PTPRR-210ENST00000550661 MMRN1Q13201 1228 aa8.52□□□□□ -1.05
PTPRR-210ENST00000550661 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
PTPRR-210ENST00000550661 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
PTPRR-210ENST00000550661 SLC4A5Q9BY07 1137 aa8.52□□□□□ -1.05
PTPRR-210ENST00000550661 NWD1Q149M9 1564 aa8.52□□□□□ -1.05
PTPRR-210ENST00000550661 ADGRF5Q8IZF2 1346 aa8.52□□□□□ -1.05
PTPRR-210ENST00000550661 SETD1AO15047 1707 aaKnown RBP8.51□□□□□ -1.05
PTPRR-210ENST00000550661 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
PTPRR-210ENST00000550661 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
PTPRR-210ENST00000550661 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
PTPRR-210ENST00000550661 PROX2Q3B8N5 592 aa8.51□□□□□ -1.05
PTPRR-210ENST00000550661 RALGAPBQ86X10 1494 aa8.51□□□□□ -1.05
PTPRR-210ENST00000550661 ASXL1Q8IXJ9 1541 aa8.5□□□□□ -1.05
PTPRR-210ENST00000550661 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
PTPRR-210ENST00000550661 SLC24A1O60721 1099 aa8.5□□□□□ -1.05
PTPRR-210ENST00000550661 SMYD5Q6GMV2 418 aa8.5□□□□□ -1.05
PTPRR-210ENST00000550661 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
PTPRR-210ENST00000550661 TRPM1Q7Z4N2 1603 aa8.5□□□□□ -1.05
PTPRR-210ENST00000550661 NKTRP30414 1462 aaKnown RBP8.5□□□□□ -1.05
PTPRR-210ENST00000550661 HRO43593 1189 aa8.49□□□□□ -1.05
PTPRR-210ENST00000550661 NUTM2DQ5VT03 806 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-210ENST00000550661 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
PTPRR-210ENST00000550661 TECPR2O15040 1411 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 PTCH1Q13635 1447 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 TBX22Q9Y458 520 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 KNDC1Q76NI1 1749 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 CPS1P31327 1500 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 GPRASP1Q5JY77 1395 aa8.48□□□□□ -1.05
PTPRR-210ENST00000550661 BCANQ96GW7 911 aa8.47□□□□□ -1.05
PTPRR-210ENST00000550661 C14orf93Q9H972 538 aaKnown RBP8.47□□□□□ -1.05
PTPRR-210ENST00000550661 METP08581 1390 aa8.47□□□□□ -1.05
PTPRR-210ENST00000550661 DLC1Q96QB1 1528 aa8.46□□□□□ -1.05
PTPRR-210ENST00000550661 NUTM2FA1L443 756 aa8.46□□□□□ -1.06
PTPRR-210ENST00000550661 TRIM6-TRIM34B2RNG4 842 aa8.46□□□□□ -1.06
PTPRR-210ENST00000550661 RNF166Q96A37 237 aaPredicted RBP8.46□□□□□ -1.06
PTPRR-210ENST00000550661 SLC26A8Q96RN1 970 aa8.46□□□□□ -1.06
PTPRR-210ENST00000550661 KIAA1468Q9P260 1216 aa8.46□□□□□ -1.06
PTPRR-210ENST00000550661 ROCK2O75116 1388 aaKnown RBP8.46□□□□□ -1.06
PTPRR-210ENST00000550661 LRPPRCP42704 1394 aaKnown RBP8.46□□□□□ -1.06
PTPRR-210ENST00000550661 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
PTPRR-210ENST00000550661 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-210ENST00000550661 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-210ENST00000550661 PRSS12P56730 875 aa8.45□□□□□ -1.06
PTPRR-210ENST00000550661 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
PTPRR-210ENST00000550661 CDCA7LQ96GN5 454 aa8.45□□□□□ -1.06
PTPRR-210ENST00000550661 NBPF3Q9H094 633 aa8.45□□□□□ -1.06
PTPRR-210ENST00000550661 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
PTPRR-210ENST00000550661 PTPRUQ92729 1446 aa8.45□□□□□ -1.06
PTPRR-210ENST00000550661 ZEB1P37275 1124 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-210ENST00000550661 CFAP70Q5T0N1 1121 aa8.44□□□□□ -1.06
PTPRR-210ENST00000550661 MRPL50Q8N5N7 158 aaKnown RBP8.44□□□□□ -1.06
PTPRR-210ENST00000550661 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-210ENST00000550661 EIF3AQ14152 1382 aaKnown RBP8.44□□□□□ -1.06
PTPRR-210ENST00000550661 ABCC11Q96J66 1382 aa8.44□□□□□ -1.06
PTPRR-210ENST00000550661 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
PTPRR-210ENST00000550661 CHD2O14647 1828 aaKnown RBP8.43□□□□□ -1.06
PTPRR-210ENST00000550661 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
PTPRR-210ENST00000550661 KCNA6P17658 529 aa8.43□□□□□ -1.06
PTPRR-210ENST00000550661 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
PTPRR-210ENST00000550661 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
PTPRR-210ENST00000550661 LTBP4Q8N2S1 1624 aa8.43□□□□□ -1.06
PTPRR-210ENST00000550661 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
PTPRR-210ENST00000550661 GOLGA8CPA6NN73 597 aa8.42□□□□□ -1.06
PTPRR-210ENST00000550661 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
PTPRR-210ENST00000550661 ZNF335Q9H4Z2 1342 aaPredicted RBP8.42□□□□□ -1.06
PTPRR-210ENST00000550661 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
PTPRR-210ENST00000550661 STRCP1A6NGW2 1772 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 ADGRB2O60241 1585 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 LRRC7Q96NW7 1537 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 IQSEC2Q5JU85 1478 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 ROBO2Q9HCK4 1378 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 PTGDRQ13258 359 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 FAM198AQ9UFP1 575 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 AMOTL2Q9Y2J4 779 aa8.41□□□□□ -1.06
PTPRR-210ENST00000550661 CDC42BPGQ6DT37 1551 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 DCCP43146 1447 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 SBNO2Q9Y2G9 1366 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 NBPF1Q3BBV0 1214 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 TMEM132EQ6IEE7 984 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 PADI6Q6TGC4 694 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 KCTD12Q96CX2 325 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms