RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 PCF11O94913 1555 aaKnown RBP14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 KIAA1107Q9UPP5 1409 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 CYP46A1Q9Y6A2 500 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 CT47B1P0C2W7 299 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 BRPF1P55201 1214 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 STK38Q15208 465 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 TRAK2O60296 914 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 DACH1Q9UI36 760 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 CCDC69A6NI79 296 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 CCDC192P0DO97 292 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 RNF214Q8ND24 703 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 PRAM1Q96QH2 718 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 TATP17735 454 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 SRCIN1Q9C0H9 1055 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 STRN4Q9NRL3 753 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 ATP2B2Q01814 1243 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 CCDC141Q6ZP82 1450 aa14.83□□□□□ -0.04
RAB3IP-212ENST00000550536 PPP2R1AP30153 589 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 CABP4P57796 275 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 CEBPZQ03701 1054 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 FIBPO43427 364 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 CDKL5O76039 1030 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 HDGFL1Q5TGJ6 251 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 PDE3AQ14432 1141 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 ZSCAN25Q6NSZ9 544 aa14.82□□□□□ -0.04
RAB3IP-212ENST00000550536 FMNL2Q96PY5 1086 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 ATP2B1P20020 1258 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 MPHOSPH8Q99549 860 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 SERPINC1P01008 464 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 PAF1Q8N7H5 531 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 ME1P48163 572 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 TNMDQ9H2S6 317 aa14.81□□□□□ -0.04
RAB3IP-212ENST00000550536 PNISRQ8TF01 805 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 CCDC57Q2TAC2 916 aa14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 PPFIBP1Q86W92 1011 aa14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 SPG7Q9UQ90 795 aa14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 PRPF40AO75400 957 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 HMGN5P82970 282 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-212ENST00000550536 CDK19Q9BWU1 502 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 WDR33Q9C0J8 1336 aaKnown RBP14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 LEKR1Q6ZMV7 388 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 DEF6Q9H4E7 631 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 IQCEQ6IPM2 695 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 SEPT7Q16181 437 aaKnown RBP14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 AXDND1Q5T1B0 1012 aaPredicted RBP14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
RAB3IP-212ENST00000550536 SIL1Q9H173 461 aa14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 SPC24Q8NBT2 197 aa14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 ANKRD18AQ8IVF6 992 aa14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 MYL6BP14649 208 aa14.78□□□□□ -0.04
RAB3IP-212ENST00000550536 CCDC66A2RUB6 948 aa14.77□□□□□ -0.04
RAB3IP-212ENST00000550536 TOM1L2Q6ZVM7 507 aa14.77□□□□□ -0.04
RAB3IP-212ENST00000550536 KRT85P78386 507 aa14.77□□□□□ -0.05
RAB3IP-212ENST00000550536 CFAP45Q9UL16 551 aa14.77□□□□□ -0.05
RAB3IP-212ENST00000550536 DAPK1P53355 1430 aa14.77□□□□□ -0.05
RAB3IP-212ENST00000550536 HMGXB3Q12766 1538 aa14.77□□□□□ -0.05
RAB3IP-212ENST00000550536 SKIDA1Q1XH10 827 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 WDR63Q8IWG1 891 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 PDZRN3Q9UPQ7 1066 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 POGZQ7Z3K3 1410 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 NESP48681 1621 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 STK3Q13188 491 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 RBM5P52756 815 aaKnown RBP eCLIP14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 SULT6B1Q6IMI4 303 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 CCDC181Q5TID7 509 aa14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 FKBP4Q02790 459 aaKnown RBP eCLIP14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 NOL7Q9UMY1 257 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 PROSER2Q86WR7 435 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-212ENST00000550536 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 SF3B2Q13435 895 aaKnown RBP14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 TSR2Q969E8 191 aaKnown RBP14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 CFAP70Q5T0N1 1121 aa14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 AACSQ86V21 672 aa14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 NEFHP12036 1026 aa14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 PPP1R1BQ9UD71 204 aaPredicted RBP14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 K7ELQ4 463 aaPredicted RBP14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 DESP17661 470 aa14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 ZNF530Q6P9A1 599 aaPredicted RBP14.75□□□□□ -0.05
RAB3IP-212ENST00000550536 SOGA3Q5TF21 947 aa14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 ENOX2Q16206 610 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 TDO2P48775 406 aa14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 ZHX3Q9H4I2 956 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms