RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 EML3Q32P44 896 aa9.65□□□□□ -0.86
HCFC2-204ENST00000550335 OCSTAMPQ9BR26 566 aa9.65□□□□□ -0.86
HCFC2-204ENST00000550335 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
HCFC2-204ENST00000550335 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
HCFC2-204ENST00000550335 ATP5J2-PTCD1G3V325 749 aa9.64□□□□□ -0.87
HCFC2-204ENST00000550335 MMP16P51512 607 aa9.64□□□□□ -0.87
HCFC2-204ENST00000550335 TSGA10IPQ3SY00 556 aa9.64□□□□□ -0.87
HCFC2-204ENST00000550335 PTCRAQ6ISU1 281 aaPredicted RBP9.64□□□□□ -0.87
HCFC2-204ENST00000550335 SND1Q7KZF4 910 aaKnown RBP eCLIP9.64□□□□□ -0.87
HCFC2-204ENST00000550335 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
HCFC2-204ENST00000550335 KCTD12Q96CX2 325 aaKnown RBP9.64□□□□□ -0.87
HCFC2-204ENST00000550335 ZNF594Q96JF6 807 aaPredicted RBP9.64□□□□□ -0.87
HCFC2-204ENST00000550335 ZPR1O75312 459 aa9.62□□□□□ -0.87
HCFC2-204ENST00000550335 PTK7Q13308 1070 aa9.62□□□□□ -0.87
HCFC2-204ENST00000550335 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
HCFC2-204ENST00000550335 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
HCFC2-204ENST00000550335 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
HCFC2-204ENST00000550335 CDCA7Q9BWT1 371 aaPredicted RBP9.62□□□□□ -0.87
HCFC2-204ENST00000550335 ADH1BP00325 375 aa9.61□□□□□ -0.87
HCFC2-204ENST00000550335 LINC01559Q495D7 138 aa9.61□□□□□ -0.87
HCFC2-204ENST00000550335 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
HCFC2-204ENST00000550335 DOLKQ9UPQ8 538 aa9.61□□□□□ -0.87
HCFC2-204ENST00000550335 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
HCFC2-204ENST00000550335 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
HCFC2-204ENST00000550335 PTPN5P54829 565 aa9.6□□□□□ -0.87
HCFC2-204ENST00000550335 DPYDQ12882 1025 aa9.6□□□□□ -0.87
HCFC2-204ENST00000550335 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
HCFC2-204ENST00000550335 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
HCFC2-204ENST00000550335 BAP1Q92560 729 aa9.6□□□□□ -0.87
HCFC2-204ENST00000550335 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
HCFC2-204ENST00000550335 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
HCFC2-204ENST00000550335 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
HCFC2-204ENST00000550335 ARID4AP29374 1257 aaPredicted RBP9.59□□□□□ -0.87
HCFC2-204ENST00000550335 TRIM50Q86XT4 487 aa9.59□□□□□ -0.87
HCFC2-204ENST00000550335 MTRQ99707 1265 aa9.59□□□□□ -0.87
HCFC2-204ENST00000550335 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
HCFC2-204ENST00000550335 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
HCFC2-204ENST00000550335 ATP2B4P23634 1241 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 SSFA2P28290 1259 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 PSME1Q06323 249 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 SH3BP5LQ7L8J4 393 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 FOXJ1Q92949 421 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
HCFC2-204ENST00000550335 SLAIN2Q9P270 581 aa9.57□□□□□ -0.88
HCFC2-204ENST00000550335 RAB15P59190 212 aa9.56□□□□□ -0.88
HCFC2-204ENST00000550335 CLDN10P78369 228 aa9.56□□□□□ -0.88
HCFC2-204ENST00000550335 TRAF7Q6Q0C0 670 aa9.56□□□□□ -0.88
HCFC2-204ENST00000550335 E9PSI1 815 aa9.55□□□□□ -0.88
HCFC2-204ENST00000550335 LGR5O75473 907 aa9.55□□□□□ -0.88
HCFC2-204ENST00000550335 SCNN1AP37088 669 aa9.55□□□□□ -0.88
HCFC2-204ENST00000550335 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
HCFC2-204ENST00000550335 BPHLQ86WA6 291 aaPredicted RBP9.55□□□□□ -0.88
HCFC2-204ENST00000550335 PRMT3O60678 531 aa9.54□□□□□ -0.88
HCFC2-204ENST00000550335 GTF2IP78347 998 aa9.54□□□□□ -0.88
HCFC2-204ENST00000550335 FAM69CQ0P6D2 419 aa9.54□□□□□ -0.88
HCFC2-204ENST00000550335 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
HCFC2-204ENST00000550335 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
HCFC2-204ENST00000550335 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
HCFC2-204ENST00000550335 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
HCFC2-204ENST00000550335 S1PR4O95977 384 aa9.53□□□□□ -0.88
HCFC2-204ENST00000550335 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
HCFC2-204ENST00000550335 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
HCFC2-204ENST00000550335 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
HCFC2-204ENST00000550335 IL21Q9HBE4 155 aa9.53□□□□□ -0.88
HCFC2-204ENST00000550335 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
HCFC2-204ENST00000550335 SFI1A8K8P3 1242 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 SERPINB4P48594 390 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 LARGE2Q8N3Y3 721 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 NKX2-3Q8TAU0 364 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 KIAA1024Q9UPX6 916 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
HCFC2-204ENST00000550335 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
HCFC2-204ENST00000550335 ABL1P00519 1130 aa9.51□□□□□ -0.89
HCFC2-204ENST00000550335 SEC13P55735 322 aa9.51□□□□□ -0.89
HCFC2-204ENST00000550335 NYAP1Q6ZVC0 841 aa9.51□□□□□ -0.89
HCFC2-204ENST00000550335 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
HCFC2-204ENST00000550335 TPCN2Q8NHX9 752 aa9.51□□□□□ -0.89
HCFC2-204ENST00000550335 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
HCFC2-204ENST00000550335 TJAP1Q5JTD0 557 aa9.5□□□□□ -0.89
HCFC2-204ENST00000550335 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
HCFC2-204ENST00000550335 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
HCFC2-204ENST00000550335 USP4Q13107 963 aa9.49□□□□□ -0.89
HCFC2-204ENST00000550335 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
HCFC2-204ENST00000550335 SIRT1Q96EB6 747 aa9.49□□□□□ -0.89
HCFC2-204ENST00000550335 ESF1Q9H501 851 aaKnown RBP9.49□□□□□ -0.89
HCFC2-204ENST00000550335 SOWAHDA6NJG2 315 aa9.48□□□□□ -0.89
HCFC2-204ENST00000550335 PPEF1O14829 653 aaPredicted RBP9.48□□□□□ -0.89
HCFC2-204ENST00000550335 ANO2Q9NQ90 1003 aa9.48□□□□□ -0.89
HCFC2-204ENST00000550335 ZBTB24O43167 697 aaPredicted RBP9.47□□□□□ -0.89
HCFC2-204ENST00000550335 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
HCFC2-204ENST00000550335 AMOTL2Q9Y2J4 779 aa9.47□□□□□ -0.89
HCFC2-204ENST00000550335 POTEMA6NI47 508 aa9.46□□□□□ -0.9
HCFC2-204ENST00000550335 SH3BP2P78314 561 aa9.46□□□□□ -0.9
HCFC2-204ENST00000550335 SIX5Q8N196 739 aa9.46□□□□□ -0.9
HCFC2-204ENST00000550335 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms