RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 AXIN2Q9Y2T1 843 aa18.11■□□□□ 0.49
LETMD1-222ENST00000550274 LTN1O94822 1766 aa18.1■□□□□ 0.49
LETMD1-222ENST00000550274 NFAT5O94916 1531 aa18.1■□□□□ 0.49
LETMD1-222ENST00000550274 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
LETMD1-222ENST00000550274 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
LETMD1-222ENST00000550274 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
LETMD1-222ENST00000550274 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
LETMD1-222ENST00000550274 WDR17Q8IZU2 1322 aa18.09■□□□□ 0.49
LETMD1-222ENST00000550274 TOM1L2Q6ZVM7 507 aa18.09■□□□□ 0.49
LETMD1-222ENST00000550274 DDB1Q16531 1140 aa18.08■□□□□ 0.48
LETMD1-222ENST00000550274 NBPF14Q5TI25 921 aa18.08■□□□□ 0.48
LETMD1-222ENST00000550274 PTF1AQ7RTS3 328 aa18.07■□□□□ 0.48
LETMD1-222ENST00000550274 C11orf95C9JLR9 678 aaPredicted RBP18.06■□□□□ 0.48
LETMD1-222ENST00000550274 SOX12O15370 315 aa18.06■□□□□ 0.48
LETMD1-222ENST00000550274 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
LETMD1-222ENST00000550274 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
LETMD1-222ENST00000550274 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-222ENST00000550274 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
LETMD1-222ENST00000550274 ABCC6O95255 1503 aa18.04■□□□□ 0.48
LETMD1-222ENST00000550274 MARCH10Q8NA82 808 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-222ENST00000550274 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
LETMD1-222ENST00000550274 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
LETMD1-222ENST00000550274 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
LETMD1-222ENST00000550274 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
LETMD1-222ENST00000550274 BCL9O00512 1426 aa18.02■□□□□ 0.48
LETMD1-222ENST00000550274 PLSCR1O15162 318 aa18.02■□□□□ 0.48
LETMD1-222ENST00000550274 MSH5O43196 834 aa18.02■□□□□ 0.48
LETMD1-222ENST00000550274 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
LETMD1-222ENST00000550274 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
LETMD1-222ENST00000550274 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
LETMD1-222ENST00000550274 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-222ENST00000550274 SPON1Q9HCB6 807 aa18.01■□□□□ 0.47
LETMD1-222ENST00000550274 KCNQ2O43526 872 aa18■□□□□ 0.47
LETMD1-222ENST00000550274 CSB-PGBD3P0DP91 1061 aa18■□□□□ 0.47
LETMD1-222ENST00000550274 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
LETMD1-222ENST00000550274 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
LETMD1-222ENST00000550274 SBNO2Q9Y2G9 1366 aa18■□□□□ 0.47
LETMD1-222ENST00000550274 MYOM1P52179 1685 aa17.99■□□□□ 0.47
LETMD1-222ENST00000550274 PROM2Q8N271 834 aa17.99■□□□□ 0.47
LETMD1-222ENST00000550274 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
LETMD1-222ENST00000550274 BTAF1O14981 1849 aa17.98■□□□□ 0.47
LETMD1-222ENST00000550274 KCNA4P22459 653 aa17.98■□□□□ 0.47
LETMD1-222ENST00000550274 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
LETMD1-222ENST00000550274 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
LETMD1-222ENST00000550274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
LETMD1-222ENST00000550274 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
LETMD1-222ENST00000550274 PPP1R1BQ9UD71 204 aaPredicted RBP17.97■□□□□ 0.47
LETMD1-222ENST00000550274 NINLQ9Y2I6 1382 aa17.96■□□□□ 0.47
LETMD1-222ENST00000550274 NME9Q86XW9 330 aa17.95■□□□□ 0.46
LETMD1-222ENST00000550274 EXOC5O00471 708 aa17.94■□□□□ 0.46
LETMD1-222ENST00000550274 ERBB3P21860 1342 aa17.94■□□□□ 0.46
LETMD1-222ENST00000550274 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
LETMD1-222ENST00000550274 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
LETMD1-222ENST00000550274 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
LETMD1-222ENST00000550274 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
LETMD1-222ENST00000550274 RGPD2P0DJD1 1756 aa17.93■□□□□ 0.46
LETMD1-222ENST00000550274 UTRNP46939 3433 aa17.92■□□□□ 0.46
LETMD1-222ENST00000550274 EDC4Q6P2E9 1401 aaKnown RBP17.91■□□□□ 0.46
LETMD1-222ENST00000550274 ZBTB7AO95365 584 aa17.91■□□□□ 0.46
LETMD1-222ENST00000550274 YY1P25490 414 aa17.91■□□□□ 0.46
LETMD1-222ENST00000550274 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
LETMD1-222ENST00000550274 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
LETMD1-222ENST00000550274 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
LETMD1-222ENST00000550274 NLRP2Q9NX02 1062 aa17.9■□□□□ 0.46
LETMD1-222ENST00000550274 ACSBG1Q96GR2 724 aa17.89■□□□□ 0.45
LETMD1-222ENST00000550274 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.45
LETMD1-222ENST00000550274 PTGER2P43116 358 aa17.88■□□□□ 0.45
LETMD1-222ENST00000550274 SLC15A2Q16348 729 aa17.88■□□□□ 0.45
LETMD1-222ENST00000550274 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
LETMD1-222ENST00000550274 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
LETMD1-222ENST00000550274 TUBGCP6Q96RT7 1819 aa17.88■□□□□ 0.45
LETMD1-222ENST00000550274 QSER1Q2KHR3 1735 aa17.87■□□□□ 0.45
LETMD1-222ENST00000550274 DOT1LQ8TEK3 1739 aa17.87■□□□□ 0.45
LETMD1-222ENST00000550274 IL2RBP14784 551 aa17.87■□□□□ 0.45
LETMD1-222ENST00000550274 ANKRD24Q8TF21 1146 aa17.87■□□□□ 0.45
LETMD1-222ENST00000550274 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-222ENST00000550274 CHD4Q14839 1912 aa17.87■□□□□ 0.45
LETMD1-222ENST00000550274 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
LETMD1-222ENST00000550274 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
LETMD1-222ENST00000550274 LY75O60449 1722 aa17.84■□□□□ 0.45
LETMD1-222ENST00000550274 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
LETMD1-222ENST00000550274 COL24A1Q17RW2 1714 aa17.82■□□□□ 0.44
LETMD1-222ENST00000550274 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
LETMD1-222ENST00000550274 IP6K1Q92551 441 aa17.81■□□□□ 0.44
LETMD1-222ENST00000550274 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
LETMD1-222ENST00000550274 TESK2Q96S53 571 aa17.81■□□□□ 0.44
LETMD1-222ENST00000550274 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
LETMD1-222ENST00000550274 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
LETMD1-222ENST00000550274 LTV1Q96GA3 475 aaPredicted RBP17.8■□□□□ 0.44
LETMD1-222ENST00000550274 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
LETMD1-222ENST00000550274 LRRC4BQ9NT99 713 aa17.8■□□□□ 0.44
LETMD1-222ENST00000550274 KIF20BQ96Q89 1820 aa17.79■□□□□ 0.44
LETMD1-222ENST00000550274 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
LETMD1-222ENST00000550274 FBLN1P23142 703 aa17.78■□□□□ 0.44
LETMD1-222ENST00000550274 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
LETMD1-222ENST00000550274 GOLGB1Q14789 3259 aaKnown RBP17.78■□□□□ 0.44
LETMD1-222ENST00000550274 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
LETMD1-222ENST00000550274 DDX54Q8TDD1 881 aaKnown RBP17.77■□□□□ 0.44
LETMD1-222ENST00000550274 HOXC9P31274 260 aa17.76■□□□□ 0.43
LETMD1-222ENST00000550274 MEGF6O75095 1541 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms