RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 COL18A1P39060 1754 aa30.91■■■□□ 2.54
BRF1-216ENST00000550208 RRS1Q15050 365 aaKnown RBP30.88■■■□□ 2.53
BRF1-216ENST00000550208 LARP1Q6PKG0 1096 aaKnown RBP30.88■■■□□ 2.53
BRF1-216ENST00000550208 AMER1Q5JTC6 1135 aaPredicted RBP30.87■■■□□ 2.53
BRF1-216ENST00000550208 MAP3K19Q56UN5 1328 aa30.87■■■□□ 2.53
BRF1-216ENST00000550208 SPATA31A5Q5VU36 1347 aa30.86■■■□□ 2.53
BRF1-216ENST00000550208 SPATA31A7Q8IWB4 1347 aa30.86■■■□□ 2.53
BRF1-216ENST00000550208 IP6K1Q92551 441 aa30.85■■■□□ 2.53
BRF1-216ENST00000550208 COL5A2P05997 1499 aaPredicted RBP30.84■■■□□ 2.53
BRF1-216ENST00000550208 LTN1O94822 1766 aa30.84■■■□□ 2.53
BRF1-216ENST00000550208 RGPD5Q99666 1765 aa30.84■■■□□ 2.53
BRF1-216ENST00000550208 GLI3P10071 1580 aa30.83■■■□□ 2.53
BRF1-216ENST00000550208 TNNT2P45379 298 aaPredicted RBP30.83■■■□□ 2.53
BRF1-216ENST00000550208 AMPHP49418 695 aa30.83■■■□□ 2.53
BRF1-216ENST00000550208 NSD2O96028 1365 aa30.81■■■□□ 2.52
BRF1-216ENST00000550208 SPATA31A1Q5TZJ5 1347 aa30.81■■■□□ 2.52
BRF1-216ENST00000550208 MORC1Q86VD1 984 aa30.81■■■□□ 2.52
BRF1-216ENST00000550208 USP35Q9P2H5 1018 aa30.81■■■□□ 2.52
BRF1-216ENST00000550208 HOXC9P31274 260 aa30.8■■■□□ 2.52
BRF1-216ENST00000550208 CSB-PGBD3P0DP91 1061 aa30.79■■■□□ 2.52
BRF1-216ENST00000550208 WDR17Q8IZU2 1322 aa30.78■■■□□ 2.52
BRF1-216ENST00000550208 CDK12Q9NYV4 1490 aaPredicted RBP30.78■■■□□ 2.52
BRF1-216ENST00000550208 ONECUT3O60422 494 aaPredicted RBP30.78■■■□□ 2.52
BRF1-216ENST00000550208 FAM98CQ17RN3 349 aaKnown RBP30.78■■■□□ 2.52
BRF1-216ENST00000550208 CC2D1BQ5T0F9 858 aaKnown RBP30.78■■■□□ 2.52
BRF1-216ENST00000550208 TOM1L2Q6ZVM7 507 aa30.78■■■□□ 2.52
BRF1-216ENST00000550208 EMILIN1Q9Y6C2 1016 aa30.78■■■□□ 2.52
BRF1-216ENST00000550208 RGS12O14924 1447 aa30.78■■■□□ 2.52
BRF1-216ENST00000550208 CNGB1Q14028 1251 aaPredicted RBP30.77■■■□□ 2.52
BRF1-216ENST00000550208 ANKRD24Q8TF21 1146 aa30.77■■■□□ 2.52
BRF1-216ENST00000550208 ANKRD26Q9UPS8 1709 aa30.77■■■□□ 2.52
BRF1-216ENST00000550208 ABCC6O95255 1503 aa30.77■■■□□ 2.52
BRF1-216ENST00000550208 LTV1Q96GA3 475 aaPredicted RBP30.76■■■□□ 2.51
BRF1-216ENST00000550208 SEPT12Q8IYM1 358 aa30.75■■■□□ 2.51
BRF1-216ENST00000550208 POLKQ9UBT6 870 aa30.75■■■□□ 2.51
BRF1-216ENST00000550208 CRB1P82279 1406 aa30.74■■■□□ 2.51
BRF1-216ENST00000550208 PPM1GO15355 546 aaPredicted RBP30.74■■■□□ 2.51
BRF1-216ENST00000550208 TCP11L2Q8N4U5 519 aa30.74■■■□□ 2.51
BRF1-216ENST00000550208 ERBB3P21860 1342 aa30.73■■■□□ 2.51
BRF1-216ENST00000550208 DDX10Q13206 875 aaKnown RBP30.73■■■□□ 2.51
BRF1-216ENST00000550208 HSP90AB2PQ58FF8 381 aa30.73■■■□□ 2.51
BRF1-216ENST00000550208 BLMP54132 1417 aaPredicted RBP30.73■■■□□ 2.51
BRF1-216ENST00000550208 MAP2P11137 1827 aaKnown RBP30.72■■■□□ 2.51
BRF1-216ENST00000550208 RTL1A6NKG5 1358 aa30.71■■■□□ 2.51
BRF1-216ENST00000550208 CARD10Q9BWT7 1032 aa30.71■■■□□ 2.51
BRF1-216ENST00000550208 NPC1L1Q9UHC9 1359 aa30.7■■■□□ 2.51
BRF1-216ENST00000550208 A0A0G2JS52 829 aa30.7■■■□□ 2.51
BRF1-216ENST00000550208 MYT1Q01538 1121 aa30.7■■■□□ 2.51
BRF1-216ENST00000550208 BARGINQ6ZT62 677 aa30.7■■■□□ 2.51
BRF1-216ENST00000550208 NLRP2Q9NX02 1062 aa30.7■■■□□ 2.51
BRF1-216ENST00000550208 THRAP3Q9Y2W1 955 aaKnown RBP30.69■■■□□ 2.5
BRF1-216ENST00000550208 PEAK1Q9H792 1746 aa30.69■■■□□ 2.5
BRF1-216ENST00000550208 FLT4P35916 1363 aa30.68■■■□□ 2.5
BRF1-216ENST00000550208 KIF24Q5T7B8 1368 aa30.67■■■□□ 2.5
BRF1-216ENST00000550208 ZNF316A6NFI3 1004 aaPredicted RBP30.66■■■□□ 2.5
BRF1-216ENST00000550208 INSRP06213 1382 aa30.66■■■□□ 2.5
BRF1-216ENST00000550208 SOCS7O14512 581 aa30.61■■■□□ 2.49
BRF1-216ENST00000550208 NBPF6Q5VWK0 638 aa30.6■■■□□ 2.49
BRF1-216ENST00000550208 NBPF4Q96M43 638 aa30.6■■■□□ 2.49
BRF1-216ENST00000550208 BRWD3Q6RI45 1802 aa30.59■■■□□ 2.49
BRF1-216ENST00000550208 KRT27Q7Z3Y8 459 aa30.59■■■□□ 2.49
BRF1-216ENST00000550208 THSD7AQ9UPZ6 1657 aa30.58■■■□□ 2.49
BRF1-216ENST00000550208 MTHFSP49914 203 aa30.58■■■□□ 2.49
BRF1-216ENST00000550208 SMG6Q86US8 1419 aaKnown RBP30.56■■■□□ 2.48
BRF1-216ENST00000550208 EIF4A2Q14240 407 aaKnown RBP30.55■■■□□ 2.48
BRF1-216ENST00000550208 USHBP1Q8N6Y0 703 aa30.55■■■□□ 2.48
BRF1-216ENST00000550208 CDCA7Q9BWT1 371 aaPredicted RBP30.55■■■□□ 2.48
BRF1-216ENST00000550208 RGPD2P0DJD1 1756 aa30.55■■■□□ 2.48
BRF1-216ENST00000550208 FAM182BQ5T319 152 aa30.53■■■□□ 2.48
BRF1-216ENST00000550208 IL2RBP14784 551 aa30.52■■■□□ 2.48
BRF1-216ENST00000550208 PDE3BQ13370 1112 aa30.52■■■□□ 2.48
BRF1-216ENST00000550208 DISP2A7MBM2 1401 aa30.52■■■□□ 2.48
BRF1-216ENST00000550208 DDB1Q16531 1140 aa30.51■■■□□ 2.47
BRF1-216ENST00000550208 EYA1Q99502 592 aa30.51■■■□□ 2.47
BRF1-216ENST00000550208 FAM208AQ9UK61 1670 aaKnown RBP30.51■■■□□ 2.47
BRF1-216ENST00000550208 EXOC5O00471 708 aa30.49■■■□□ 2.47
BRF1-216ENST00000550208 PPP2R1AP30153 589 aa30.48■■■□□ 2.47
BRF1-216ENST00000550208 UPF1Q92900 1129 aaKnown RBP eCLIP30.47■■■□□ 2.47
BRF1-216ENST00000550208 PARP4Q9UKK3 1724 aaKnown RBP30.47■■■□□ 2.47
BRF1-216ENST00000550208 WNK3Q9BYP7 1800 aa30.46■■■□□ 2.47
BRF1-216ENST00000550208 IL13P35225 146 aa30.45■■■□□ 2.47
BRF1-216ENST00000550208 PARD3Q8TEW0 1356 aa30.42■■■□□ 2.46
BRF1-216ENST00000550208 MARCH10Q8NA82 808 aaPredicted RBP30.42■■■□□ 2.46
BRF1-216ENST00000550208 RAPGEF4Q8WZA2 1011 aa30.41■■■□□ 2.46
BRF1-216ENST00000550208 LRRC37A3O60309 1634 aa30.4■■■□□ 2.46
BRF1-216ENST00000550208 MEGF6O75095 1541 aa30.39■■■□□ 2.46
BRF1-216ENST00000550208 DIAPH1O60610 1272 aaKnown RBP30.39■■■□□ 2.46
BRF1-216ENST00000550208 TATP17735 454 aaPredicted RBP30.39■■■□□ 2.46
BRF1-216ENST00000550208 FAM196AQ6ZSG2 479 aa30.39■■■□□ 2.46
BRF1-216ENST00000550208 IGSF1Q8N6C5 1336 aa30.39■■■□□ 2.46
BRF1-216ENST00000550208 RALBP1Q15311 655 aa30.38■■■□□ 2.45
BRF1-216ENST00000550208 NCAPD2Q15021 1401 aa30.38■■■□□ 2.45
BRF1-216ENST00000550208 ZCRB1Q8TBF4 217 aaKnown RBP30.37■■■□□ 2.45
BRF1-216ENST00000550208 DDX54Q8TDD1 881 aaKnown RBP30.35■■■□□ 2.45
BRF1-216ENST00000550208 TNS2Q63HR2 1409 aa30.35■■■□□ 2.45
BRF1-216ENST00000550208 OVOS2A0A0G2JMS6 1433 aa30.34■■■□□ 2.45
BRF1-216ENST00000550208 AEBP1Q8IUX7 1158 aa30.34■■■□□ 2.45
BRF1-216ENST00000550208 CFAP53Q96M91 514 aa30.34■■■□□ 2.45
BRF1-216ENST00000550208 SULT6B1Q6IMI4 303 aa30.33■■■□□ 2.45
BRF1-216ENST00000550208 COL3A1P02461 1466 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms