RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	KCTD15	Q96SI1	283 aa	Predicted RBP	10.45	□□□□□ -0.74
CNOT2-222	ENST00000550155	KLF16	Q9BXK1	252 aa	Predicted RBP	10.45	□□□□□ -0.74
CNOT2-222	ENST00000550155	UPP2	O95045	317 aa		10.44	□□□□□ -0.74
CNOT2-222	ENST00000550155	NBPF20	Q3BBV1	942 aa		10.44	□□□□□ -0.74
CNOT2-222	ENST00000550155	SOCS7	O14512	581 aa		10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	DHX9	Q08211	1270 aa	Known RBP	10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	MRPL14	Q6P1L8	145 aa	Known RBP	10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	TRIM46	Q7Z4K8	759 aa		10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	GJD4	Q96KN9	370 aa	Predicted RBP	10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	ZFAND3	Q9H8U3	227 aa		10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	PRM3	Q9NNZ6	103 aa		10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	PGPEP1	Q9NXJ5	209 aa		10.43	□□□□□ -0.74
CNOT2-222	ENST00000550155	ZBBX	A8MT70	800 aa		10.42	□□□□□ -0.74
CNOT2-222	ENST00000550155	SNRPB	P14678	240 aa	Known RBP	10.42	□□□□□ -0.74
CNOT2-222	ENST00000550155	OCSTAMP	Q9BR26	566 aa		10.42	□□□□□ -0.74
CNOT2-222	ENST00000550155	NDUFB9	Q9Y6M9	179 aa		10.42	□□□□□ -0.74
CNOT2-222	ENST00000550155	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.4	□□□□□ -0.74
CNOT2-222	ENST00000550155	MTMR14	Q8NCE2	650 aa		10.4	□□□□□ -0.74
CNOT2-222	ENST00000550155	TRIM52	Q96A61	297 aa		10.4	□□□□□ -0.74
CNOT2-222	ENST00000550155	ZFP42	Q96MM3	310 aa		10.4	□□□□□ -0.74
CNOT2-222	ENST00000550155	SNRK	Q9NRH2	765 aa		10.4	□□□□□ -0.74
CNOT2-222	ENST00000550155	ZNF592	Q92610	1267 aa		10.39	□□□□□ -0.75
CNOT2-222	ENST00000550155	PURB	Q96QR8	312 aa	Known RBP	10.39	□□□□□ -0.75
CNOT2-222	ENST00000550155	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.39	□□□□□ -0.75
CNOT2-222	ENST00000550155	PCDHB9	Q9Y5E1	797 aa		10.38	□□□□□ -0.75
CNOT2-222	ENST00000550155	INTS6L	Q5JSJ4	861 aa	Known RBP	10.37	□□□□□ -0.75
CNOT2-222	ENST00000550155	FBXO45	P0C2W1	286 aa		10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	BMP2	P12643	396 aa		10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	RAB15	P59190	212 aa		10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	MCCD1	P59942	119 aa	Predicted RBP	10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	C6orf118	Q5T5N4	469 aa		10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	MEIOB	Q8N635	442 aa		10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	TSEN34	Q9BSV6	310 aa	Known RBP	10.36	□□□□□ -0.75
CNOT2-222	ENST00000550155	NR1H3	Q13133	447 aa		10.35	□□□□□ -0.75
CNOT2-222	ENST00000550155	SEPT12	Q8IYM1	358 aa		10.34	□□□□□ -0.75
CNOT2-222	ENST00000550155	LINC00528	Q8N1L1	170 aa		10.34	□□□□□ -0.75
CNOT2-222	ENST00000550155	TREML4	Q6UXN2	200 aa		10.32	□□□□□ -0.76
CNOT2-222	ENST00000550155	CCDC125	Q86Z20	511 aa		10.32	□□□□□ -0.76
CNOT2-222	ENST00000550155	ESPN	B1AK53	854 aa		10.31	□□□□□ -0.76
CNOT2-222	ENST00000550155	MAN1A2	O60476	641 aa		10.31	□□□□□ -0.76
CNOT2-222	ENST00000550155	RNF20	Q5VTR2	975 aa		10.31	□□□□□ -0.76
CNOT2-222	ENST00000550155	ERVH48-1	M5A8F1	160 aa		10.3	□□□□□ -0.76
CNOT2-222	ENST00000550155	WFS1	O76024	890 aa		10.3	□□□□□ -0.76
CNOT2-222	ENST00000550155	CBLB	Q13191	982 aa		10.3	□□□□□ -0.76
CNOT2-222	ENST00000550155		Q6ZVU0	165 aa		10.3	□□□□□ -0.76
CNOT2-222	ENST00000550155	GIGYF1	O75420	1035 aa	Predicted RBP	10.29	□□□□□ -0.76
CNOT2-222	ENST00000550155	SLC16A10	Q8TF71	515 aa		10.29	□□□□□ -0.76
CNOT2-222	ENST00000550155	TBC1D2B	Q9UPU7	963 aa		10.29	□□□□□ -0.76
CNOT2-222	ENST00000550155	TERT	O14746	1132 aa	Known RBP	10.28	□□□□□ -0.76
CNOT2-222	ENST00000550155	TMPRSS4	Q9NRS4	437 aa		10.28	□□□□□ -0.76
CNOT2-222	ENST00000550155	NXF1	Q9UBU9	619 aa	Known RBP	10.28	□□□□□ -0.76
CNOT2-222	ENST00000550155	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.27	□□□□□ -0.77
CNOT2-222	ENST00000550155	RELB	Q01201	579 aa		10.26	□□□□□ -0.77
CNOT2-222	ENST00000550155	ESF1	Q9H501	851 aa	Known RBP	10.26	□□□□□ -0.77
CNOT2-222	ENST00000550155	TTLL8	A6PVC2	850 aa		10.25	□□□□□ -0.77
CNOT2-222	ENST00000550155	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
CNOT2-222	ENST00000550155	NPAS3	Q8IXF0	933 aa		10.25	□□□□□ -0.77
CNOT2-222	ENST00000550155	SPINT1	O43278	529 aa		10.24	□□□□□ -0.77
CNOT2-222	ENST00000550155	GPR37L1	O60883	481 aa		10.24	□□□□□ -0.77
CNOT2-222	ENST00000550155	NFX1	Q12986	1120 aa	Known RBP	10.24	□□□□□ -0.77
CNOT2-222	ENST00000550155	AGBL1	Q96MI9	1066 aa		10.24	□□□□□ -0.77
CNOT2-222	ENST00000550155	SOS2	Q07890	1332 aa	Predicted RBP	10.24	□□□□□ -0.77
CNOT2-222	ENST00000550155	SOBP	A7XYQ1	873 aa		10.23	□□□□□ -0.77
CNOT2-222	ENST00000550155	ADH1A	P07327	375 aa		10.23	□□□□□ -0.77
CNOT2-222	ENST00000550155	ABL2	P42684	1182 aa		10.23	□□□□□ -0.77
CNOT2-222	ENST00000550155	MCM6	Q14566	821 aa		10.23	□□□□□ -0.77
CNOT2-222	ENST00000550155	GDPD2	Q9HCC8	539 aa		10.23	□□□□□ -0.77
CNOT2-222	ENST00000550155	CYLD	Q9NQC7	956 aa		10.23	□□□□□ -0.77
CNOT2-222	ENST00000550155	WASHC4	Q2M389	1173 aa		10.22	□□□□□ -0.77
CNOT2-222	ENST00000550155	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.22	□□□□□ -0.77
CNOT2-222	ENST00000550155	LILRA1	O75019	489 aa		10.21	□□□□□ -0.77
CNOT2-222	ENST00000550155	TMEM132A	Q24JP5	1023 aa		10.21	□□□□□ -0.77
CNOT2-222	ENST00000550155	ADD1	P35611	737 aa	Known RBP	10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	PTGIR	P43119	386 aa		10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	WWC1	Q8IX03	1113 aa		10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	POLM	Q9NP87	494 aa	Predicted RBP	10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	CEP126	Q9P2H0	1117 aa		10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	PCDHB11	Q9Y5F2	797 aa		10.2	□□□□□ -0.78
CNOT2-222	ENST00000550155	FIGNL2	A6NMB9	653 aa		10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	FLII	Q13045	1269 aa		10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	IRF5	Q13568	498 aa		10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	CC2D2B	Q6DHV5	1058 aa		10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	IRF7	Q92985	503 aa		10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	INSM2	Q96T92	566 aa	Predicted RBP	10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	DNMT3L	Q9UJW3	386 aa		10.19	□□□□□ -0.78
CNOT2-222	ENST00000550155	RAD21	O60216	631 aa		10.18	□□□□□ -0.78
CNOT2-222	ENST00000550155	VEGFB	P49765	207 aa		10.18	□□□□□ -0.78
CNOT2-222	ENST00000550155	ATP5J2-PTCD1	G3V325	749 aa		10.17	□□□□□ -0.78
CNOT2-222	ENST00000550155		H3BM21	787 aa		10.17	□□□□□ -0.78
CNOT2-222	ENST00000550155	VAC14	Q08AM6	782 aa		10.17	□□□□□ -0.78
CNOT2-222	ENST00000550155	LCE2A	Q5TA79	106 aa	Predicted RBP	10.17	□□□□□ -0.78
CNOT2-222	ENST00000550155	CTSO	P43234	321 aa	Predicted RBP	10.16	□□□□□ -0.78
CNOT2-222	ENST00000550155	ERVK-9	P63128	1117 aa		10.16	□□□□□ -0.78
CNOT2-222	ENST00000550155	SLFNL1	Q499Z3	407 aa		10.16	□□□□□ -0.78
CNOT2-222	ENST00000550155	MYC	P01106	439 aa	Predicted RBP	10.15	□□□□□ -0.78
CNOT2-222	ENST00000550155	SEMA3F	Q13275	785 aa		10.15	□□□□□ -0.78
CNOT2-222	ENST00000550155	CYP2U1	Q7Z449	544 aa		10.15	□□□□□ -0.78
CNOT2-222	ENST00000550155	SOX11	P35716	441 aa		10.14	□□□□□ -0.79
CNOT2-222	ENST00000550155	UBTF	P17480	764 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms