RNA–Protein interactions for RNA: ENST00000550025.1

EIF4B-208, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 2

Gene EIF4B, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-208ENST00000550025 ESPNB1AK53 854 aa9.06□□□□□ -0.96
EIF4B-208ENST00000550025 CCDC116Q8IYX3 515 aa9.06□□□□□ -0.96
EIF4B-208ENST00000550025 TRIM47Q96LD4 638 aa9.06□□□□□ -0.96
EIF4B-208ENST00000550025 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
EIF4B-208ENST00000550025 APBB1O00213 710 aa9.05□□□□□ -0.96
EIF4B-208ENST00000550025 ZIC2O95409 532 aaPredicted RBP9.05□□□□□ -0.96
EIF4B-208ENST00000550025 INTS6LQ5JSJ4 861 aaKnown RBP9.05□□□□□ -0.96
EIF4B-208ENST00000550025 BMP1P13497 986 aa9.04□□□□□ -0.96
EIF4B-208ENST00000550025 NR1H3Q13133 447 aa9.04□□□□□ -0.96
EIF4B-208ENST00000550025 MCM6Q14566 821 aa9.04□□□□□ -0.96
EIF4B-208ENST00000550025 TMEM132AQ24JP5 1023 aa9.04□□□□□ -0.96
EIF4B-208ENST00000550025 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
EIF4B-208ENST00000550025 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
EIF4B-208ENST00000550025 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
EIF4B-208ENST00000550025 C11orf95C9JLR9 678 aaPredicted RBP9.03□□□□□ -0.96
EIF4B-208ENST00000550025 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
EIF4B-208ENST00000550025 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
EIF4B-208ENST00000550025 TBC1D2BQ9UPU7 963 aa9.03□□□□□ -0.96
EIF4B-208ENST00000550025 IRF5Q13568 498 aa9.02□□□□□ -0.97
EIF4B-208ENST00000550025 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
EIF4B-208ENST00000550025 DZIP3Q86Y13 1208 aaKnown RBP9.02□□□□□ -0.97
EIF4B-208ENST00000550025 MEIOBQ8N635 442 aa9.01□□□□□ -0.97
EIF4B-208ENST00000550025 KIFC2Q96AC6 838 aa9.01□□□□□ -0.97
EIF4B-208ENST00000550025 ZNF775Q96BV0 537 aaPredicted RBP9.01□□□□□ -0.97
EIF4B-208ENST00000550025 DHX9Q08211 1270 aaKnown RBP9□□□□□ -0.97
EIF4B-208ENST00000550025 Q6ZVU0 165 aa9□□□□□ -0.97
EIF4B-208ENST00000550025 SEPT12Q8IYM1 358 aa9□□□□□ -0.97
EIF4B-208ENST00000550025 ZFP42Q96MM3 310 aa9□□□□□ -0.97
EIF4B-208ENST00000550025 MCCD1P59942 119 aaPredicted RBP8.99□□□□□ -0.97
EIF4B-208ENST00000550025 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
EIF4B-208ENST00000550025 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
EIF4B-208ENST00000550025 LILRA1O75019 489 aa8.97□□□□□ -0.97
EIF4B-208ENST00000550025 GIGYF1O75420 1035 aaPredicted RBP8.97□□□□□ -0.97
EIF4B-208ENST00000550025 GDPD2Q9HCC8 539 aa8.97□□□□□ -0.97
EIF4B-208ENST00000550025 PCDHB9Q9Y5E1 797 aa8.97□□□□□ -0.97
EIF4B-208ENST00000550025 CBLBQ13191 982 aa8.96□□□□□ -0.98
EIF4B-208ENST00000550025 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
EIF4B-208ENST00000550025 PURBQ96QR8 312 aaKnown RBP8.96□□□□□ -0.98
EIF4B-208ENST00000550025 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.98
EIF4B-208ENST00000550025 TMPRSS4Q9NRS4 437 aa8.96□□□□□ -0.98
EIF4B-208ENST00000550025 SCARF1Q14162 830 aa8.95□□□□□ -0.98
EIF4B-208ENST00000550025 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
EIF4B-208ENST00000550025 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
EIF4B-208ENST00000550025 CCDC125Q86Z20 511 aa8.94□□□□□ -0.98
EIF4B-208ENST00000550025 KDF1Q8NAX2 398 aaPredicted RBP8.94□□□□□ -0.98
EIF4B-208ENST00000550025 ZNF784Q8NCA9 323 aaPredicted RBP8.94□□□□□ -0.98
EIF4B-208ENST00000550025 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
EIF4B-208ENST00000550025 TSEN34Q9BSV6 310 aaKnown RBP8.94□□□□□ -0.98
EIF4B-208ENST00000550025 COG6Q9Y2V7 657 aa8.94□□□□□ -0.98
EIF4B-208ENST00000550025 ZNF330Q9Y3S2 320 aaPredicted RBP8.93□□□□□ -0.98
EIF4B-208ENST00000550025 FLIIQ13045 1269 aa8.92□□□□□ -0.98
EIF4B-208ENST00000550025 CEP126Q9P2H0 1117 aa8.92□□□□□ -0.98
EIF4B-208ENST00000550025 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
EIF4B-208ENST00000550025 SPINT1O43278 529 aa8.91□□□□□ -0.98
EIF4B-208ENST00000550025 RAB15P59190 212 aa8.91□□□□□ -0.98
EIF4B-208ENST00000550025 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
EIF4B-208ENST00000550025 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
EIF4B-208ENST00000550025 PHTF2Q8N3S3 785 aa8.91□□□□□ -0.98
EIF4B-208ENST00000550025 UPP2O95045 317 aa8.9□□□□□ -0.98
EIF4B-208ENST00000550025 BMP2P12643 396 aa8.9□□□□□ -0.98
EIF4B-208ENST00000550025 NFX1Q12986 1120 aaKnown RBP8.9□□□□□ -0.98
EIF4B-208ENST00000550025 ABL2P42684 1182 aa8.89□□□□□ -0.99
EIF4B-208ENST00000550025 ERVK-9P63128 1117 aa8.89□□□□□ -0.99
EIF4B-208ENST00000550025 VAC14Q08AM6 782 aa8.89□□□□□ -0.99
EIF4B-208ENST00000550025 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
EIF4B-208ENST00000550025 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
EIF4B-208ENST00000550025 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
EIF4B-208ENST00000550025 ADH1AP07327 375 aa8.88□□□□□ -0.99
EIF4B-208ENST00000550025 EIF4G2P78344 907 aaKnown RBP eCLIP8.88□□□□□ -0.99
EIF4B-208ENST00000550025 TREML4Q6UXN2 200 aa8.88□□□□□ -0.99
EIF4B-208ENST00000550025 AGBL1Q96MI9 1066 aa8.88□□□□□ -0.99
EIF4B-208ENST00000550025 TERTO14746 1132 aaKnown RBP8.87□□□□□ -0.99
EIF4B-208ENST00000550025 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
EIF4B-208ENST00000550025 CYLDQ9NQC7 956 aa8.87□□□□□ -0.99
EIF4B-208ENST00000550025 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
EIF4B-208ENST00000550025 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
EIF4B-208ENST00000550025 SCTRP47872 440 aa8.86□□□□□ -0.99
EIF4B-208ENST00000550025 NPAS3Q8IXF0 933 aa8.86□□□□□ -0.99
EIF4B-208ENST00000550025 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
EIF4B-208ENST00000550025 NXF1Q9UBU9 619 aaKnown RBP8.86□□□□□ -0.99
EIF4B-208ENST00000550025 TRAK2O60296 914 aa8.85□□□□□ -0.99
EIF4B-208ENST00000550025 PTGIRP43119 386 aa8.85□□□□□ -0.99
EIF4B-208ENST00000550025 CC2D2BQ6DHV5 1058 aa8.85□□□□□ -0.99
EIF4B-208ENST00000550025 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
EIF4B-208ENST00000550025 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
EIF4B-208ENST00000550025 SOX11P35716 441 aa8.84□□□□□ -0.99
EIF4B-208ENST00000550025 RELBQ01201 579 aa8.84□□□□□ -0.99
EIF4B-208ENST00000550025 TSGA10IPQ3SY00 556 aa8.84□□□□□ -0.99
EIF4B-208ENST00000550025 PCDHB11Q9Y5F2 797 aa8.84□□□□□ -0.99
EIF4B-208ENST00000550025 MAN1A2O60476 641 aa8.83□□□□□ -1
EIF4B-208ENST00000550025 WFS1O76024 890 aa8.83□□□□□ -1
EIF4B-208ENST00000550025 CTSOP43234 321 aaPredicted RBP8.83□□□□□ -1
EIF4B-208ENST00000550025 INSM2Q96T92 566 aaPredicted RBP8.83□□□□□ -1
EIF4B-208ENST00000550025 CDCA7Q9BWT1 371 aaPredicted RBP8.83□□□□□ -1
EIF4B-208ENST00000550025 OSBPL3Q9H4L5 887 aa8.83□□□□□ -1
EIF4B-208ENST00000550025 ALG2Q9H553 416 aa8.83□□□□□ -1
EIF4B-208ENST00000550025 ZNF395Q9H8N7 513 aaPredicted RBP8.83□□□□□ -1
EIF4B-208ENST00000550025 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
EIF4B-208ENST00000550025 H3BM21 787 aa8.81□□□□□ -1
EIF4B-208ENST00000550025 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms