RNA–Protein interactions for RNA: ENST00000550025.1

EIF4B-208, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 2

Gene EIF4B, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-208ENST00000550025 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
EIF4B-208ENST00000550025 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
EIF4B-208ENST00000550025 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
EIF4B-208ENST00000550025 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
EIF4B-208ENST00000550025 FOXD1Q16676 465 aa19.77■□□□□ 0.76
EIF4B-208ENST00000550025 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
EIF4B-208ENST00000550025 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
EIF4B-208ENST00000550025 ADRA2BP18089 450 aa18.8■□□□□ 0.6
EIF4B-208ENST00000550025 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
EIF4B-208ENST00000550025 MSH5O43196 834 aa18.27■□□□□ 0.52
EIF4B-208ENST00000550025 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
EIF4B-208ENST00000550025 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
EIF4B-208ENST00000550025 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
EIF4B-208ENST00000550025 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
EIF4B-208ENST00000550025 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
EIF4B-208ENST00000550025 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
EIF4B-208ENST00000550025 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
EIF4B-208ENST00000550025 KCNA4P22459 653 aa16.57■□□□□ 0.24
EIF4B-208ENST00000550025 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
EIF4B-208ENST00000550025 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
EIF4B-208ENST00000550025 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
EIF4B-208ENST00000550025 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
EIF4B-208ENST00000550025 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
EIF4B-208ENST00000550025 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
EIF4B-208ENST00000550025 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
EIF4B-208ENST00000550025 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
EIF4B-208ENST00000550025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
EIF4B-208ENST00000550025 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
EIF4B-208ENST00000550025 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
EIF4B-208ENST00000550025 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
EIF4B-208ENST00000550025 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
EIF4B-208ENST00000550025 ZBTB22O15209 634 aa15.28■□□□□ 0.04
EIF4B-208ENST00000550025 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
EIF4B-208ENST00000550025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
EIF4B-208ENST00000550025 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
EIF4B-208ENST00000550025 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
EIF4B-208ENST00000550025 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
EIF4B-208ENST00000550025 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
EIF4B-208ENST00000550025 APLP2Q06481 763 aa14.98□□□□□ -0.01
EIF4B-208ENST00000550025 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
EIF4B-208ENST00000550025 CAPN15O75808 1086 aa14.93□□□□□ -0.02
EIF4B-208ENST00000550025 DSG3P32926 999 aa14.84□□□□□ -0.03
EIF4B-208ENST00000550025 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
EIF4B-208ENST00000550025 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
EIF4B-208ENST00000550025 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
EIF4B-208ENST00000550025 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
EIF4B-208ENST00000550025 ABCB7O75027 752 aa14.64□□□□□ -0.07
EIF4B-208ENST00000550025 POLA2Q14181 598 aa14.58□□□□□ -0.08
EIF4B-208ENST00000550025 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
EIF4B-208ENST00000550025 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
EIF4B-208ENST00000550025 FBLN2P98095 1184 aa14.13□□□□□ -0.15
EIF4B-208ENST00000550025 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
EIF4B-208ENST00000550025 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
EIF4B-208ENST00000550025 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
EIF4B-208ENST00000550025 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
EIF4B-208ENST00000550025 SPDYE2Q495Y8 402 aa13.94□□□□□ -0.18
EIF4B-208ENST00000550025 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
EIF4B-208ENST00000550025 SSUH2Q9Y2M2 353 aa13.85□□□□□ -0.19
EIF4B-208ENST00000550025 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
EIF4B-208ENST00000550025 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
EIF4B-208ENST00000550025 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
EIF4B-208ENST00000550025 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
EIF4B-208ENST00000550025 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
EIF4B-208ENST00000550025 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
EIF4B-208ENST00000550025 PROM2Q8N271 834 aa13.57□□□□□ -0.24
EIF4B-208ENST00000550025 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
EIF4B-208ENST00000550025 FKBP8Q14318 412 aa13.48□□□□□ -0.25
EIF4B-208ENST00000550025 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
EIF4B-208ENST00000550025 POTEHQ6S545 545 aa13.43□□□□□ -0.26
EIF4B-208ENST00000550025 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
EIF4B-208ENST00000550025 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
EIF4B-208ENST00000550025 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
EIF4B-208ENST00000550025 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
EIF4B-208ENST00000550025 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
EIF4B-208ENST00000550025 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
EIF4B-208ENST00000550025 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
EIF4B-208ENST00000550025 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
EIF4B-208ENST00000550025 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
EIF4B-208ENST00000550025 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
EIF4B-208ENST00000550025 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
EIF4B-208ENST00000550025 MIER1Q8N108 512 aa12.98□□□□□ -0.33
EIF4B-208ENST00000550025 HAX1O00165 279 aa12.96□□□□□ -0.33
EIF4B-208ENST00000550025 EVX2Q03828 476 aa12.94□□□□□ -0.34
EIF4B-208ENST00000550025 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
EIF4B-208ENST00000550025 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
EIF4B-208ENST00000550025 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
EIF4B-208ENST00000550025 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
EIF4B-208ENST00000550025 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
EIF4B-208ENST00000550025 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
EIF4B-208ENST00000550025 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
EIF4B-208ENST00000550025 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
EIF4B-208ENST00000550025 NUBP1P53384 320 aa12.76□□□□□ -0.37
EIF4B-208ENST00000550025 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
EIF4B-208ENST00000550025 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
EIF4B-208ENST00000550025 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
EIF4B-208ENST00000550025 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
EIF4B-208ENST00000550025 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
EIF4B-208ENST00000550025 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
EIF4B-208ENST00000550025 GABBR2O75899 941 aa12.64□□□□□ -0.39
EIF4B-208ENST00000550025 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms