RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
GPN3-206ENST00000549963 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
GPN3-206ENST00000549963 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
GPN3-206ENST00000549963 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
GPN3-206ENST00000549963 IP6K1Q92551 441 aa20.41■□□□□ 0.86
GPN3-206ENST00000549963 SPATA31A5Q5VU36 1347 aa20.41■□□□□ 0.86
GPN3-206ENST00000549963 SPATA31A7Q8IWB4 1347 aa20.41■□□□□ 0.86
GPN3-206ENST00000549963 ABCC6O95255 1503 aa20.41■□□□□ 0.86
GPN3-206ENST00000549963 COL18A1P39060 1754 aa20.41■□□□□ 0.86
GPN3-206ENST00000549963 LARP1Q6PKG0 1096 aaKnown RBP20.4■□□□□ 0.86
GPN3-206ENST00000549963 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
GPN3-206ENST00000549963 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
GPN3-206ENST00000549963 MAP3K19Q56UN5 1328 aa20.39■□□□□ 0.85
GPN3-206ENST00000549963 A0A0G2JS52 829 aa20.39■□□□□ 0.85
GPN3-206ENST00000549963 MYT1Q01538 1121 aa20.39■□□□□ 0.85
GPN3-206ENST00000549963 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
GPN3-206ENST00000549963 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
GPN3-206ENST00000549963 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
GPN3-206ENST00000549963 COL5A2P05997 1499 aaPredicted RBP20.38■□□□□ 0.85
GPN3-206ENST00000549963 SPATA31A1Q5TZJ5 1347 aa20.38■□□□□ 0.85
GPN3-206ENST00000549963 WDR17Q8IZU2 1322 aa20.38■□□□□ 0.85
GPN3-206ENST00000549963 PER1O15534 1290 aaPredicted RBP20.38■□□□□ 0.85
GPN3-206ENST00000549963 FBLN1P23142 703 aa20.38■□□□□ 0.85
GPN3-206ENST00000549963 RRS1Q15050 365 aaKnown RBP20.38■□□□□ 0.85
GPN3-206ENST00000549963 ONECUT3O60422 494 aaPredicted RBP20.37■□□□□ 0.85
GPN3-206ENST00000549963 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
GPN3-206ENST00000549963 FAM98CQ17RN3 349 aaKnown RBP20.37■□□□□ 0.85
GPN3-206ENST00000549963 TCP11L2Q8N4U5 519 aa20.37■□□□□ 0.85
GPN3-206ENST00000549963 MAP2P11137 1827 aaKnown RBP20.37■□□□□ 0.85
GPN3-206ENST00000549963 BLMP54132 1417 aaPredicted RBP20.36■□□□□ 0.85
GPN3-206ENST00000549963 CRB1P82279 1406 aa20.36■□□□□ 0.85
GPN3-206ENST00000549963 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
GPN3-206ENST00000549963 HOXC9P31274 260 aa20.36■□□□□ 0.85
GPN3-206ENST00000549963 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
GPN3-206ENST00000549963 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
GPN3-206ENST00000549963 KIF24Q5T7B8 1368 aa20.35■□□□□ 0.85
GPN3-206ENST00000549963 GLI3P10071 1580 aa20.35■□□□□ 0.85
GPN3-206ENST00000549963 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
GPN3-206ENST00000549963 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
GPN3-206ENST00000549963 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
GPN3-206ENST00000549963 BARGINQ6ZT62 677 aa20.34■□□□□ 0.85
GPN3-206ENST00000549963 CARD10Q9BWT7 1032 aa20.34■□□□□ 0.85
GPN3-206ENST00000549963 NLRP2Q9NX02 1062 aa20.34■□□□□ 0.85
GPN3-206ENST00000549963 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
GPN3-206ENST00000549963 ERBB3P21860 1342 aa20.32■□□□□ 0.84
GPN3-206ENST00000549963 RGS12O14924 1447 aa20.32■□□□□ 0.84
GPN3-206ENST00000549963 FLT4P35916 1363 aa20.32■□□□□ 0.84
GPN3-206ENST00000549963 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
GPN3-206ENST00000549963 SMG6Q86US8 1419 aaKnown RBP20.31■□□□□ 0.84
GPN3-206ENST00000549963 CDCA7Q9BWT1 371 aaPredicted RBP20.31■□□□□ 0.84
GPN3-206ENST00000549963 POLKQ9UBT6 870 aa20.31■□□□□ 0.84
GPN3-206ENST00000549963 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
GPN3-206ENST00000549963 SOCS7O14512 581 aa20.3■□□□□ 0.84
GPN3-206ENST00000549963 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
GPN3-206ENST00000549963 INSRP06213 1382 aa20.29■□□□□ 0.84
GPN3-206ENST00000549963 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
GPN3-206ENST00000549963 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
GPN3-206ENST00000549963 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
GPN3-206ENST00000549963 FAM208AQ9UK61 1670 aaKnown RBP20.27■□□□□ 0.84
GPN3-206ENST00000549963 PDE3BQ13370 1112 aa20.27■□□□□ 0.84
GPN3-206ENST00000549963 ZNF316A6NFI3 1004 aaPredicted RBP20.26■□□□□ 0.83
GPN3-206ENST00000549963 BRWD3Q6RI45 1802 aa20.25■□□□□ 0.83
GPN3-206ENST00000549963 EXOC5O00471 708 aa20.23■□□□□ 0.83
GPN3-206ENST00000549963 IL2RBP14784 551 aa20.23■□□□□ 0.83
GPN3-206ENST00000549963 DDB1Q16531 1140 aa20.23■□□□□ 0.83
GPN3-206ENST00000549963 PEAK1Q9H792 1746 aa20.23■□□□□ 0.83
GPN3-206ENST00000549963 MTHFSP49914 203 aa20.21■□□□□ 0.83
GPN3-206ENST00000549963 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
GPN3-206ENST00000549963 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
GPN3-206ENST00000549963 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
GPN3-206ENST00000549963 RAPGEF4Q8WZA2 1011 aa20.19■□□□□ 0.82
GPN3-206ENST00000549963 PARP4Q9UKK3 1724 aaKnown RBP20.19■□□□□ 0.82
GPN3-206ENST00000549963 RGPD2P0DJD1 1756 aa20.18■□□□□ 0.82
GPN3-206ENST00000549963 FAM196AQ6ZSG2 479 aa20.18■□□□□ 0.82
GPN3-206ENST00000549963 CCDC125Q86Z20 511 aa20.18■□□□□ 0.82
GPN3-206ENST00000549963 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
GPN3-206ENST00000549963 CFAP53Q96M91 514 aa20.17■□□□□ 0.82
GPN3-206ENST00000549963 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
GPN3-206ENST00000549963 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
GPN3-206ENST00000549963 SF3B2Q13435 895 aaKnown RBP20.15■□□□□ 0.82
GPN3-206ENST00000549963 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
GPN3-206ENST00000549963 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.82
GPN3-206ENST00000549963 EYA1Q99502 592 aa20.15■□□□□ 0.82
GPN3-206ENST00000549963 DISP2A7MBM2 1401 aa20.14■□□□□ 0.81
GPN3-206ENST00000549963 RALBP1Q15311 655 aa20.14■□□□□ 0.81
GPN3-206ENST00000549963 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
GPN3-206ENST00000549963 PPP2R1AP30153 589 aa20.12■□□□□ 0.81
GPN3-206ENST00000549963 FAM182BQ5T319 152 aa20.12■□□□□ 0.81
GPN3-206ENST00000549963 ZCRB1Q8TBF4 217 aaKnown RBP20.12■□□□□ 0.81
GPN3-206ENST00000549963 LRRC37A3O60309 1634 aa20.1■□□□□ 0.81
GPN3-206ENST00000549963 IL13P35225 146 aa20.1■□□□□ 0.81
GPN3-206ENST00000549963 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
GPN3-206ENST00000549963 DDX54Q8TDD1 881 aaKnown RBP20.09■□□□□ 0.81
GPN3-206ENST00000549963 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
GPN3-206ENST00000549963 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
GPN3-206ENST00000549963 OVOS2A0A0G2JMS6 1433 aa20.09■□□□□ 0.81
GPN3-206ENST00000549963 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
GPN3-206ENST00000549963 KAT6BQ8WYB5 2073 aa20.09■□□□□ 0.81
GPN3-206ENST00000549963 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
GPN3-206ENST00000549963 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms