RNA–Protein interactions for RNA: ENST00000549874.1

KIRREL3-209, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 1 (best)

Gene KIRREL3, Length 1,507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-209ENST00000549874 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
KIRREL3-209ENST00000549874 COL3A1P02461 1466 aaPredicted RBP21.75■■□□□ 1.07
KIRREL3-209ENST00000549874 CHRNA2Q15822 529 aa21.75■■□□□ 1.07
KIRREL3-209ENST00000549874 PRDM11Q9NQV5 511 aa21.75■■□□□ 1.07
KIRREL3-209ENST00000549874 DIAPH1O60610 1272 aaKnown RBP21.73■■□□□ 1.07
KIRREL3-209ENST00000549874 COL18A1P39060 1754 aa21.72■■□□□ 1.07
KIRREL3-209ENST00000549874 PNISRQ8TF01 805 aaKnown RBP21.72■■□□□ 1.07
KIRREL3-209ENST00000549874 SPATA31A6Q5VVP1 1343 aa21.71■■□□□ 1.07
KIRREL3-209ENST00000549874 ADAMTS2O95450 1211 aa21.71■■□□□ 1.07
KIRREL3-209ENST00000549874 AXIN2Q9Y2T1 843 aa21.71■■□□□ 1.07
KIRREL3-209ENST00000549874 RGPD5Q99666 1765 aa21.71■■□□□ 1.07
KIRREL3-209ENST00000549874 FAM83GA6ND36 823 aa21.7■■□□□ 1.07
KIRREL3-209ENST00000549874 IL13P35225 146 aa21.7■■□□□ 1.06
KIRREL3-209ENST00000549874 EIF4A2Q14240 407 aaKnown RBP21.7■■□□□ 1.06
KIRREL3-209ENST00000549874 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
KIRREL3-209ENST00000549874 ABCC6O95255 1503 aa21.69■■□□□ 1.06
KIRREL3-209ENST00000549874 WDR43Q15061 677 aaKnown RBP eCLIP21.69■■□□□ 1.06
KIRREL3-209ENST00000549874 FAM9BQ8IZU0 186 aa21.69■■□□□ 1.06
KIRREL3-209ENST00000549874 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
KIRREL3-209ENST00000549874 NUDCQ9Y266 331 aa21.69■■□□□ 1.06
KIRREL3-209ENST00000549874 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
KIRREL3-209ENST00000549874 LMO7Q8WWI1 1683 aa21.66■■□□□ 1.06
KIRREL3-209ENST00000549874 COL14A1Q05707 1796 aaKnown RBP21.66■■□□□ 1.06
KIRREL3-209ENST00000549874 ANKRD24Q8TF21 1146 aa21.65■■□□□ 1.06
KIRREL3-209ENST00000549874 CAMTA1Q9Y6Y1 1673 aa21.65■■□□□ 1.06
KIRREL3-209ENST00000549874 LRP6O75581 1613 aa21.65■■□□□ 1.06
KIRREL3-209ENST00000549874 U2AF1L5P0DN76 240 aaPredicted RBP21.65■■□□□ 1.06
KIRREL3-209ENST00000549874 U2AF1Q01081 240 aaKnown RBP eCLIP21.65■■□□□ 1.06
KIRREL3-209ENST00000549874 ADAMTS8Q9UP79 889 aa21.65■■□□□ 1.06
KIRREL3-209ENST00000549874 ERBB3P21860 1342 aa21.63■■□□□ 1.05
KIRREL3-209ENST00000549874 BTG4Q9NY30 223 aa21.63■■□□□ 1.05
KIRREL3-209ENST00000549874 EYA1Q99502 592 aa21.61■■□□□ 1.05
KIRREL3-209ENST00000549874 RGPD2P0DJD1 1756 aa21.61■■□□□ 1.05
KIRREL3-209ENST00000549874 PLCH1Q4KWH8 1693 aa21.61■■□□□ 1.05
KIRREL3-209ENST00000549874 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 CSB-PGBD3P0DP91 1061 aa21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 C8orf37Q96NL8 207 aa21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 COL5A2P05997 1499 aaPredicted RBP21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 EVA1CP58658 441 aa21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 MEX3CQ5U5Q3 659 aaKnown RBP21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 STRN4Q9NRL3 753 aa21.6■■□□□ 1.05
KIRREL3-209ENST00000549874 NBPF6Q5VWK0 638 aa21.59■■□□□ 1.05
KIRREL3-209ENST00000549874 NGLY1Q96IV0 654 aa21.59■■□□□ 1.05
KIRREL3-209ENST00000549874 NBPF4Q96M43 638 aa21.59■■□□□ 1.05
KIRREL3-209ENST00000549874 HMOX1P09601 288 aa21.58■■□□□ 1.04
KIRREL3-209ENST00000549874 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.04
KIRREL3-209ENST00000549874 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
KIRREL3-209ENST00000549874 NLRP2Q9NX02 1062 aa21.57■■□□□ 1.04
KIRREL3-209ENST00000549874 WDR17Q8IZU2 1322 aa21.57■■□□□ 1.04
KIRREL3-209ENST00000549874 FAM208AQ9UK61 1670 aaKnown RBP21.57■■□□□ 1.04
KIRREL3-209ENST00000549874 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
KIRREL3-209ENST00000549874 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
KIRREL3-209ENST00000549874 NWD2Q9ULI1 1742 aa21.56■■□□□ 1.04
KIRREL3-209ENST00000549874 SLIT2O94813 1529 aa21.56■■□□□ 1.04
KIRREL3-209ENST00000549874 FCHSD2O94868 740 aa21.55■■□□□ 1.04
KIRREL3-209ENST00000549874 LARP1Q6PKG0 1096 aaKnown RBP21.55■■□□□ 1.04
KIRREL3-209ENST00000549874 TOM1L2Q6ZVM7 507 aa21.55■■□□□ 1.04
KIRREL3-209ENST00000549874 CCDC146Q8IYE0 955 aa21.55■■□□□ 1.04
KIRREL3-209ENST00000549874 RSPH6AQ9H0K4 717 aa21.55■■□□□ 1.04
KIRREL3-209ENST00000549874 NRAPQ86VF7 1730 aa21.54■■□□□ 1.04
KIRREL3-209ENST00000549874 FNBP4Q8N3X1 1017 aaPredicted RBP21.53■■□□□ 1.04
KIRREL3-209ENST00000549874 KDRP35968 1356 aa21.52■■□□□ 1.04
KIRREL3-209ENST00000549874 PRKAR2BP31323 418 aa21.52■■□□□ 1.04
KIRREL3-209ENST00000549874 PNNQ9H307 717 aaKnown RBP21.52■■□□□ 1.04
KIRREL3-209ENST00000549874 CRB1P82279 1406 aa21.51■■□□□ 1.03
KIRREL3-209ENST00000549874 NCAPD2Q15021 1401 aa21.51■■□□□ 1.03
KIRREL3-209ENST00000549874 UNC5CLQ8IV45 518 aa21.5■■□□□ 1.03
KIRREL3-209ENST00000549874 RUNDC1Q96C34 613 aa21.5■■□□□ 1.03
KIRREL3-209ENST00000549874 PLEKHF1Q96S99 279 aa21.5■■□□□ 1.03
KIRREL3-209ENST00000549874 CARD10Q9BWT7 1032 aa21.5■■□□□ 1.03
KIRREL3-209ENST00000549874 BCL9LQ86UU0 1499 aa21.5■■□□□ 1.03
KIRREL3-209ENST00000549874 USP21Q9UK80 565 aa21.49■■□□□ 1.03
KIRREL3-209ENST00000549874 AFF2P51816 1311 aa21.48■■□□□ 1.03
KIRREL3-209ENST00000549874 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
KIRREL3-209ENST00000549874 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
KIRREL3-209ENST00000549874 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
KIRREL3-209ENST00000549874 NEFMP07197 916 aa21.47■■□□□ 1.03
KIRREL3-209ENST00000549874 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
KIRREL3-209ENST00000549874 PHACTR3Q96KR7 559 aa21.46■■□□□ 1.03
KIRREL3-209ENST00000549874 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.46■■□□□ 1.03
KIRREL3-209ENST00000549874 APAF1O14727 1248 aa21.45■■□□□ 1.02
KIRREL3-209ENST00000549874 HNRNPUQ00839 825 aaKnown RBP eCLIP21.45■■□□□ 1.02
KIRREL3-209ENST00000549874 TCP11L2Q8N4U5 519 aa21.45■■□□□ 1.02
KIRREL3-209ENST00000549874 RAPGEF4Q8WZA2 1011 aa21.45■■□□□ 1.02
KIRREL3-209ENST00000549874 CCDC9Q9Y3X0 531 aaKnown RBP21.45■■□□□ 1.02
KIRREL3-209ENST00000549874 VPS72Q15906 364 aa21.44■■□□□ 1.02
KIRREL3-209ENST00000549874 ILDR1Q86SU0 546 aaPredicted RBP21.44■■□□□ 1.02
KIRREL3-209ENST00000549874 SPATA31A1Q5TZJ5 1347 aa21.43■■□□□ 1.02
KIRREL3-209ENST00000549874 SPATA31A5Q5VU36 1347 aa21.43■■□□□ 1.02
KIRREL3-209ENST00000549874 SPATA31A7Q8IWB4 1347 aa21.43■■□□□ 1.02
KIRREL3-209ENST00000549874 TATP17735 454 aaPredicted RBP21.42■■□□□ 1.02
KIRREL3-209ENST00000549874 MEGF6O75095 1541 aa21.42■■□□□ 1.02
KIRREL3-209ENST00000549874 IL2RBP14784 551 aa21.4■■□□□ 1.02
KIRREL3-209ENST00000549874 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
KIRREL3-209ENST00000549874 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
KIRREL3-209ENST00000549874 TMPOP42166 694 aaKnown RBP21.39■■□□□ 1.02
KIRREL3-209ENST00000549874 NEUROD2Q15784 382 aa21.39■■□□□ 1.02
KIRREL3-209ENST00000549874 THRAP3Q9Y2W1 955 aaKnown RBP21.39■■□□□ 1.02
KIRREL3-209ENST00000549874 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
KIRREL3-209ENST00000549874 MTHFSDQ2M296 383 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms