RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 TOM1L2Q6ZVM7 507 aa15.83■□□□□ 0.12
TRAFD1-206ENST00000549358 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
TRAFD1-206ENST00000549358 SYT17Q9BSW7 474 aa15.83■□□□□ 0.12
TRAFD1-206ENST00000549358 FHDC1Q9C0D6 1143 aaPredicted RBP15.83■□□□□ 0.12
TRAFD1-206ENST00000549358 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
TRAFD1-206ENST00000549358 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
TRAFD1-206ENST00000549358 ARHGEF28Q8N1W1 1705 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-206ENST00000549358 MARCH10Q8NA82 808 aaPredicted RBP15.81■□□□□ 0.12
TRAFD1-206ENST00000549358 STK32BQ9NY57 414 aa15.81■□□□□ 0.12
TRAFD1-206ENST00000549358 C1QTNF8P60827 252 aa15.8■□□□□ 0.12
TRAFD1-206ENST00000549358 SRPK2P78362 688 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-206ENST00000549358 TXNRD1Q16881 649 aa15.8■□□□□ 0.12
TRAFD1-206ENST00000549358 MYOM1P52179 1685 aa15.79■□□□□ 0.12
TRAFD1-206ENST00000549358 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
TRAFD1-206ENST00000549358 NLRP6P59044 892 aa15.79■□□□□ 0.12
TRAFD1-206ENST00000549358 SLC15A2Q16348 729 aa15.79■□□□□ 0.12
TRAFD1-206ENST00000549358 RGPD3A6NKT7 1758 aaPredicted RBP15.79■□□□□ 0.12
TRAFD1-206ENST00000549358 RGPD4Q7Z3J3 1758 aa15.79■□□□□ 0.12
TRAFD1-206ENST00000549358 PPIP5K1Q6PFW1 1433 aa15.78■□□□□ 0.12
TRAFD1-206ENST00000549358 AATKQ6ZMQ8 1374 aa15.78■□□□□ 0.12
TRAFD1-206ENST00000549358 AXIN2Q9Y2T1 843 aa15.78■□□□□ 0.12
TRAFD1-206ENST00000549358 LRRC37A3O60309 1634 aa15.78■□□□□ 0.12
TRAFD1-206ENST00000549358 MTFR1LQ9H019 292 aa15.77■□□□□ 0.12
TRAFD1-206ENST00000549358 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
TRAFD1-206ENST00000549358 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
TRAFD1-206ENST00000549358 SBF2Q86WG5 1849 aa15.76■□□□□ 0.11
TRAFD1-206ENST00000549358 CDCA7Q9BWT1 371 aaPredicted RBP15.76■□□□□ 0.11
TRAFD1-206ENST00000549358 WDR17Q8IZU2 1322 aa15.75■□□□□ 0.11
TRAFD1-206ENST00000549358 SGIP1Q9BQI5 828 aa15.75■□□□□ 0.11
TRAFD1-206ENST00000549358 CABP1Q9NZU7 370 aa15.75■□□□□ 0.11
TRAFD1-206ENST00000549358 EXOC5O00471 708 aa15.74■□□□□ 0.11
TRAFD1-206ENST00000549358 ARXQ96QS3 562 aa15.74■□□□□ 0.11
TRAFD1-206ENST00000549358 BCL9O00512 1426 aa15.74■□□□□ 0.11
TRAFD1-206ENST00000549358 CSB-PGBD3P0DP91 1061 aa15.73■□□□□ 0.11
TRAFD1-206ENST00000549358 BRD4O60885 1362 aaPredicted RBP15.73■□□□□ 0.11
TRAFD1-206ENST00000549358 NBPF1Q3BBV0 1214 aa15.72■□□□□ 0.11
TRAFD1-206ENST00000549358 IFFO2Q5TF58 517 aa15.72■□□□□ 0.11
TRAFD1-206ENST00000549358 SOX12O15370 315 aa15.71■□□□□ 0.11
TRAFD1-206ENST00000549358 GPR162Q16538 588 aa15.71■□□□□ 0.11
TRAFD1-206ENST00000549358 CARD10Q9BWT7 1032 aa15.71■□□□□ 0.11
TRAFD1-206ENST00000549358 SLIT3O75094 1523 aa15.71■□□□□ 0.11
TRAFD1-206ENST00000549358 USP6P35125 1406 aa15.7■□□□□ 0.1
TRAFD1-206ENST00000549358 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
TRAFD1-206ENST00000549358 CENPJQ9HC77 1338 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-206ENST00000549358 ACSBG1Q96GR2 724 aa15.69■□□□□ 0.1
TRAFD1-206ENST00000549358 COL18A1P39060 1754 aa15.68■□□□□ 0.1
TRAFD1-206ENST00000549358 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-206ENST00000549358 KCNH5Q8NCM2 988 aa15.68■□□□□ 0.1
TRAFD1-206ENST00000549358 CPSF1Q10570 1443 aaKnown RBP15.68■□□□□ 0.1
TRAFD1-206ENST00000549358 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
TRAFD1-206ENST00000549358 KLHL34Q8N239 644 aa15.67■□□□□ 0.1
TRAFD1-206ENST00000549358 WNK3Q9BYP7 1800 aa15.66■□□□□ 0.1
TRAFD1-206ENST00000549358 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
TRAFD1-206ENST00000549358 ZNF827Q17R98 1081 aa15.65■□□□□ 0.1
TRAFD1-206ENST00000549358 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
TRAFD1-206ENST00000549358 CCDC7Q96M83 1385 aa15.64■□□□□ 0.09
TRAFD1-206ENST00000549358 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
TRAFD1-206ENST00000549358 CHD4Q14839 1912 aa15.64■□□□□ 0.09
TRAFD1-206ENST00000549358 TTC21BQ7Z4L5 1316 aa15.64■□□□□ 0.09
TRAFD1-206ENST00000549358 LRRC4BQ9NT99 713 aa15.63■□□□□ 0.09
TRAFD1-206ENST00000549358 KIAA1210Q9ULL0 1709 aa15.63■□□□□ 0.09
TRAFD1-206ENST00000549358 TNS2Q63HR2 1409 aa15.62■□□□□ 0.09
TRAFD1-206ENST00000549358 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
TRAFD1-206ENST00000549358 POLD1P28340 1107 aa15.61■□□□□ 0.09
TRAFD1-206ENST00000549358 NLRP2Q9NX02 1062 aa15.61■□□□□ 0.09
TRAFD1-206ENST00000549358 RGPD5Q99666 1765 aa15.61■□□□□ 0.09
TRAFD1-206ENST00000549358 GOLGB1Q14789 3259 aaKnown RBP15.6■□□□□ 0.09
TRAFD1-206ENST00000549358 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
TRAFD1-206ENST00000549358 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
TRAFD1-206ENST00000549358 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
TRAFD1-206ENST00000549358 PAPPAQ13219 1627 aa15.59■□□□□ 0.09
TRAFD1-206ENST00000549358 IL2RBP14784 551 aa15.59■□□□□ 0.09
TRAFD1-206ENST00000549358 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
TRAFD1-206ENST00000549358 TRPM1Q7Z4N2 1603 aa15.58■□□□□ 0.09
TRAFD1-206ENST00000549358 QRICH2Q9H0J4 1663 aa15.58■□□□□ 0.08
TRAFD1-206ENST00000549358 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
TRAFD1-206ENST00000549358 TTC21AQ8NDW8 1320 aa15.58■□□□□ 0.08
TRAFD1-206ENST00000549358 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
TRAFD1-206ENST00000549358 CEP350Q5VT06 3117 aa15.57■□□□□ 0.08
TRAFD1-206ENST00000549358 KCNQ4P56696 695 aa15.56■□□□□ 0.08
TRAFD1-206ENST00000549358 ERBB3P21860 1342 aa15.56■□□□□ 0.08
TRAFD1-206ENST00000549358 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
TRAFD1-206ENST00000549358 NFAT5O94916 1531 aa15.56■□□□□ 0.08
TRAFD1-206ENST00000549358 ABCC6O95255 1503 aa15.56■□□□□ 0.08
TRAFD1-206ENST00000549358 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
TRAFD1-206ENST00000549358 KCNA4P22459 653 aa15.55■□□□□ 0.08
TRAFD1-206ENST00000549358 SLC27A3Q5K4L6 730 aa15.55■□□□□ 0.08
TRAFD1-206ENST00000549358 DDX54Q8TDD1 881 aaKnown RBP15.55■□□□□ 0.08
TRAFD1-206ENST00000549358 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
TRAFD1-206ENST00000549358 YBX3P16989 372 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■■■□ 20.1
TRAFD1-206ENST00000549358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRAFD1-206ENST00000549358 ANKRD24Q8TF21 1146 aa15.54■□□□□ 0.08
TRAFD1-206ENST00000549358 BTAF1O14981 1849 aa15.54■□□□□ 0.08
TRAFD1-206ENST00000549358 SHANK3Q9BYB0 1731 aa15.53■□□□□ 0.08
TRAFD1-206ENST00000549358 SYTL4Q96C24 671 aaPredicted RBP15.52■□□□□ 0.08
TRAFD1-206ENST00000549358 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
TRAFD1-206ENST00000549358 NME9Q86XW9 330 aa15.5■□□□□ 0.07
TRAFD1-206ENST00000549358 USP31Q70CQ4 1352 aa15.49■□□□□ 0.07
TRAFD1-206ENST00000549358 GPBP1L1Q9HC44 474 aaPredicted RBP15.48■□□□□ 0.07
TRAFD1-206ENST00000549358 ATP10DQ9P241 1426 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms