RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 UPF1Q92900 1129 aaKnown RBP eCLIP25.87■■□□□ 1.738e-7■■□□□ 11.6
BRF1-214ENST00000549044 GGNBP2Q9H3C7 697 aa25.87■■□□□ 1.73
BRF1-214ENST00000549044 FBLN1P23142 703 aa25.86■■□□□ 1.73
BRF1-214ENST00000549044 USP35Q9P2H5 1018 aa25.85■■□□□ 1.73
BRF1-214ENST00000549044 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
BRF1-214ENST00000549044 COG3Q96JB2 828 aa25.84■■□□□ 1.73
BRF1-214ENST00000549044 BRWD3Q6RI45 1802 aa25.84■■□□□ 1.73
BRF1-214ENST00000549044 A0A0G2JS52 829 aa25.82■■□□□ 1.72
BRF1-214ENST00000549044 MYT1Q01538 1121 aa25.82■■□□□ 1.72
BRF1-214ENST00000549044 THSD7AQ9UPZ6 1657 aa25.8■■□□□ 1.72
BRF1-214ENST00000549044 RGPD5Q99666 1765 aa25.8■■□□□ 1.72
BRF1-214ENST00000549044 KIF7Q2M1P5 1343 aa25.79■■□□□ 1.72
BRF1-214ENST00000549044 CRB1P82279 1406 aa25.79■■□□□ 1.72
BRF1-214ENST00000549044 TCP11L2Q8N4U5 519 aa25.78■■□□□ 1.72
BRF1-214ENST00000549044 WDR17Q8IZU2 1322 aa25.78■■□□□ 1.72
BRF1-214ENST00000549044 LTN1O94822 1766 aa25.77■■□□□ 1.72
BRF1-214ENST00000549044 KRT27Q7Z3Y8 459 aa25.77■■□□□ 1.72
BRF1-214ENST00000549044 PANK3Q9H999 370 aa25.77■■□□□ 1.72
BRF1-214ENST00000549044 MAP3K19Q56UN5 1328 aa25.77■■□□□ 1.72
BRF1-214ENST00000549044 BARGINQ6ZT62 677 aa25.76■■□□□ 1.71
BRF1-214ENST00000549044 TOM1L2Q6ZVM7 507 aa25.76■■□□□ 1.71
BRF1-214ENST00000549044 ABCC6O95255 1503 aa25.76■■□□□ 1.71
BRF1-214ENST00000549044 KIF20BQ96Q89 1820 aa25.76■■□□□ 1.71
BRF1-214ENST00000549044 FAM182BQ5T319 152 aa25.75■■□□□ 1.71
BRF1-214ENST00000549044 CSB-PGBD3P0DP91 1061 aa25.73■■□□□ 1.71
BRF1-214ENST00000549044 RRS1Q15050 365 aaKnown RBP25.73■■□□□ 1.71
BRF1-214ENST00000549044 IP6K1Q92551 441 aa25.72■■□□□ 1.71
BRF1-214ENST00000549044 ERBB3P21860 1342 aa25.71■■□□□ 1.71
BRF1-214ENST00000549044 THRAP3Q9Y2W1 955 aaKnown RBP25.71■■□□□ 1.71
BRF1-214ENST00000549044 CGNL1Q0VF96 1302 aa25.7■■□□□ 1.71
BRF1-214ENST00000549044 ANKRD24Q8TF21 1146 aa25.7■■□□□ 1.7
BRF1-214ENST00000549044 CARD10Q9BWT7 1032 aa25.7■■□□□ 1.7
BRF1-214ENST00000549044 HOXC9P31274 260 aa25.69■■□□□ 1.7
BRF1-214ENST00000549044 WASHC2AQ641Q2 1341 aa25.67■■□□□ 1.7
BRF1-214ENST00000549044 AMPHP49418 695 aa25.67■■□□□ 1.7
BRF1-214ENST00000549044 BLMP54132 1417 aaPredicted RBP25.67■■□□□ 1.7
BRF1-214ENST00000549044 LTV1Q96GA3 475 aaPredicted RBP25.67■■□□□ 1.7
BRF1-214ENST00000549044 CCDC7Q96M83 1385 aa25.67■■□□□ 1.7
BRF1-214ENST00000549044 NLRP2Q9NX02 1062 aa25.66■■□□□ 1.7
BRF1-214ENST00000549044 EP400Q96L91 3159 aa25.64■■□□□ 1.7
BRF1-214ENST00000549044 DISP2A7MBM2 1401 aa25.64■■□□□ 1.7
BRF1-214ENST00000549044 PEAK1Q9H792 1746 aa25.64■■□□□ 1.7
BRF1-214ENST00000549044 EMILIN1Q9Y6C2 1016 aa25.64■■□□□ 1.7
BRF1-214ENST00000549044 PARP4Q9UKK3 1724 aaKnown RBP25.63■■□□□ 1.69
BRF1-214ENST00000549044 RTL1A6NKG5 1358 aa25.62■■□□□ 1.69
BRF1-214ENST00000549044 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
BRF1-214ENST00000549044 LRRC37A3O60309 1634 aa25.61■■□□□ 1.69
BRF1-214ENST00000549044 WNK3Q9BYP7 1800 aa25.6■■□□□ 1.69
BRF1-214ENST00000549044 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
BRF1-214ENST00000549044 HSP90AB2PQ58FF8 381 aa25.6■■□□□ 1.69
BRF1-214ENST00000549044 KNSTRNQ9Y448 316 aa25.58■■□□□ 1.69
BRF1-214ENST00000549044 ANKRD26Q9UPS8 1709 aa25.57■■□□□ 1.68
BRF1-214ENST00000549044 PER1O15534 1290 aaPredicted RBP25.57■■□□□ 1.68
BRF1-214ENST00000549044 DDB1Q16531 1140 aa25.57■■□□□ 1.68
BRF1-214ENST00000549044 AMER1Q5JTC6 1135 aaPredicted RBP25.57■■□□□ 1.68
BRF1-214ENST00000549044 CCDC125Q86Z20 511 aa25.57■■□□□ 1.68
BRF1-214ENST00000549044 POLKQ9UBT6 870 aa25.57■■□□□ 1.68
BRF1-214ENST00000549044 FLT4P35916 1363 aa25.56■■□□□ 1.68
BRF1-214ENST00000549044 INSRP06213 1382 aa25.56■■□□□ 1.68
BRF1-214ENST00000549044 PPM1GO15355 546 aaPredicted RBP25.55■■□□□ 1.68
BRF1-214ENST00000549044 DEFB132Q7Z7B7 95 aa25.55■■□□□ 1.68
BRF1-214ENST00000549044 CDCA7Q9BWT1 371 aaPredicted RBP25.55■■□□□ 1.68
BRF1-214ENST00000549044 NSD2O96028 1365 aa25.55■■□□□ 1.68
BRF1-214ENST00000549044 NBPF6Q5VWK0 638 aa25.54■■□□□ 1.68
BRF1-214ENST00000549044 FAM196AQ6ZSG2 479 aa25.54■■□□□ 1.68
BRF1-214ENST00000549044 MARCH10Q8NA82 808 aaPredicted RBP25.54■■□□□ 1.68
BRF1-214ENST00000549044 NBPF4Q96M43 638 aa25.54■■□□□ 1.68
BRF1-214ENST00000549044 KIF24Q5T7B8 1368 aa25.54■■□□□ 1.68
BRF1-214ENST00000549044 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
BRF1-214ENST00000549044 USHBP1Q8N6Y0 703 aa25.53■■□□□ 1.68
BRF1-214ENST00000549044 FAM208AQ9UK61 1670 aaKnown RBP25.52■■□□□ 1.68
BRF1-214ENST00000549044 TRIM37O94972 964 aa25.52■■□□□ 1.68
BRF1-214ENST00000549044 IL2RBP14784 551 aa25.52■■□□□ 1.68
BRF1-214ENST00000549044 MORC1Q86VD1 984 aa25.52■■□□□ 1.68
BRF1-214ENST00000549044 EXOC5O00471 708 aa25.5■■□□□ 1.67
BRF1-214ENST00000549044 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
BRF1-214ENST00000549044 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
BRF1-214ENST00000549044 SF3B2Q13435 895 aaKnown RBP25.49■■□□□ 1.67
BRF1-214ENST00000549044 OVOS2A0A0G2JMS6 1433 aa25.48■■□□□ 1.67
BRF1-214ENST00000549044 SMG6Q86US8 1419 aaKnown RBP25.47■■□□□ 1.67
BRF1-214ENST00000549044 TNS1Q9HBL0 1735 aaKnown RBP25.47■■□□□ 1.67
BRF1-214ENST00000549044 CC2D1BQ5T0F9 858 aaKnown RBP25.46■■□□□ 1.67
BRF1-214ENST00000549044 PTF1AQ7RTS3 328 aa25.46■■□□□ 1.67
BRF1-214ENST00000549044 MEGF6O75095 1541 aa25.46■■□□□ 1.67
BRF1-214ENST00000549044 RGPD1P0DJD0 1748 aa25.45■■□□□ 1.66
BRF1-214ENST00000549044 EN1Q05925 392 aaPredicted RBP25.44■■□□□ 1.66
BRF1-214ENST00000549044 CNGB1Q14028 1251 aaPredicted RBP25.44■■□□□ 1.66
BRF1-214ENST00000549044 BAG6P46379 1132 aa25.42■■□□□ 1.66
BRF1-214ENST00000549044 EIF4A2Q14240 407 aaKnown RBP25.42■■□□□ 1.66
BRF1-214ENST00000549044 EYA1Q99502 592 aa25.41■■□□□ 1.66
BRF1-214ENST00000549044 BCL9O00512 1426 aa25.4■■□□□ 1.66
BRF1-214ENST00000549044 APBA3O96018 575 aa25.4■■□□□ 1.66
BRF1-214ENST00000549044 NCAPD2Q15021 1401 aa25.39■■□□□ 1.66
BRF1-214ENST00000549044 DDX54Q8TDD1 881 aaKnown RBP25.39■■□□□ 1.66
BRF1-214ENST00000549044 NPC1L1Q9UHC9 1359 aa25.39■■□□□ 1.65
BRF1-214ENST00000549044 SBF2Q86WG5 1849 aa25.37■■□□□ 1.65
BRF1-214ENST00000549044 KCNQ2O43526 872 aa25.37■■□□□ 1.65
BRF1-214ENST00000549044 EZH2Q15910 746 aaKnown RBP25.37■■□□□ 1.65
BRF1-214ENST00000549044 ZCRB1Q8TBF4 217 aaKnown RBP25.37■■□□□ 1.65
BRF1-214ENST00000549044 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms