RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 BMP2P12643 396 aa10.13□□□□□ -0.79
CNOT2-216ENST00000548939 LINC00528Q8N1L1 170 aa10.13□□□□□ -0.79
CNOT2-216ENST00000548939 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
CNOT2-216ENST00000548939 ZC3H4Q9UPT8 1303 aaKnown RBP10.12□□□□□ -0.79
CNOT2-216ENST00000548939 MAN1A2O60476 641 aa10.12□□□□□ -0.79
CNOT2-216ENST00000548939 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
CNOT2-216ENST00000548939 GMPRP36959 345 aa10.12□□□□□ -0.79
CNOT2-216ENST00000548939 ZBTB33Q86T24 672 aa10.11□□□□□ -0.79
CNOT2-216ENST00000548939 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
CNOT2-216ENST00000548939 PTK2Q05397 1052 aa10.1□□□□□ -0.79
CNOT2-216ENST00000548939 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
CNOT2-216ENST00000548939 KCTD15Q96SI1 283 aaPredicted RBP10.09□□□□□ -0.79
CNOT2-216ENST00000548939 TSEN34Q9BSV6 310 aaKnown RBP10.09□□□□□ -0.79
CNOT2-216ENST00000548939 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
CNOT2-216ENST00000548939 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
CNOT2-216ENST00000548939 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
CNOT2-216ENST00000548939 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
CNOT2-216ENST00000548939 PNMA1Q8ND90 353 aa10.07□□□□□ -0.8
CNOT2-216ENST00000548939 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
CNOT2-216ENST00000548939 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
CNOT2-216ENST00000548939 EPS8L1Q8TE68 723 aa10.06□□□□□ -0.8
CNOT2-216ENST00000548939 HMX1Q9NP08 348 aaPredicted RBP10.06□□□□□ -0.8
CNOT2-216ENST00000548939 RFC5P40937 340 aa10.05□□□□□ -0.8
CNOT2-216ENST00000548939 DHX9Q08211 1270 aaKnown RBP10.05□□□□□ -0.8
CNOT2-216ENST00000548939 ADAM32Q8TC27 787 aa10.05□□□□□ -0.8
CNOT2-216ENST00000548939 OCSTAMPQ9BR26 566 aa10.05□□□□□ -0.8
CNOT2-216ENST00000548939 CBLBQ13191 982 aa10.04□□□□□ -0.8
CNOT2-216ENST00000548939 PCMTD1Q96MG8 357 aaPredicted RBP10.04□□□□□ -0.8
CNOT2-216ENST00000548939 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
CNOT2-216ENST00000548939 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
CNOT2-216ENST00000548939 Q6ZVU0 165 aa10.03□□□□□ -0.8
CNOT2-216ENST00000548939 ZSCAN1Q8NBB4 408 aa10.03□□□□□ -0.8
CNOT2-216ENST00000548939 FAM181BA6NEQ2 426 aa10.02□□□□□ -0.81
CNOT2-216ENST00000548939 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
CNOT2-216ENST00000548939 NEUROD2Q15784 382 aa10.02□□□□□ -0.81
CNOT2-216ENST00000548939 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
CNOT2-216ENST00000548939 PPFIA3O75145 1194 aa10.01□□□□□ -0.81
CNOT2-216ENST00000548939 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
CNOT2-216ENST00000548939 NBPF20Q3BBV1 942 aa10.01□□□□□ -0.81
CNOT2-216ENST00000548939 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
CNOT2-216ENST00000548939 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
CNOT2-216ENST00000548939 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
CNOT2-216ENST00000548939 TMEM259Q4ZIN3 620 aa9.99□□□□□ -0.81
CNOT2-216ENST00000548939 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
CNOT2-216ENST00000548939 SPINT1O43278 529 aa9.98□□□□□ -0.81
CNOT2-216ENST00000548939 RAB15P59190 212 aa9.98□□□□□ -0.81
CNOT2-216ENST00000548939 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
CNOT2-216ENST00000548939 AGBL1Q96MI9 1066 aa9.97□□□□□ -0.81
CNOT2-216ENST00000548939 TRIM34Q9BYJ4 488 aa9.97□□□□□ -0.81
CNOT2-216ENST00000548939 RELBQ01201 579 aa9.96□□□□□ -0.82
CNOT2-216ENST00000548939 TMPRSS4Q9NRS4 437 aa9.96□□□□□ -0.82
CNOT2-216ENST00000548939 PTSQ03393 145 aa9.95□□□□□ -0.82
CNOT2-216ENST00000548939 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
CNOT2-216ENST00000548939 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
CNOT2-216ENST00000548939 CTSOP43234 321 aaPredicted RBP9.93□□□□□ -0.82
CNOT2-216ENST00000548939 INSM2Q96T92 566 aaPredicted RBP9.93□□□□□ -0.82
CNOT2-216ENST00000548939 ESPNB1AK53 854 aa9.92□□□□□ -0.82
CNOT2-216ENST00000548939 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
CNOT2-216ENST00000548939 POLMQ9NP87 494 aaPredicted RBP9.92□□□□□ -0.82
CNOT2-216ENST00000548939 ADH1AP07327 375 aa9.91□□□□□ -0.82
CNOT2-216ENST00000548939 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
CNOT2-216ENST00000548939 LILRA1O75019 489 aa9.9□□□□□ -0.82
CNOT2-216ENST00000548939 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
CNOT2-216ENST00000548939 CCDC155Q8N6L0 562 aa9.9□□□□□ -0.82
CNOT2-216ENST00000548939 ADD1P35611 737 aaKnown RBP9.89□□□□□ -0.83
CNOT2-216ENST00000548939 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
CNOT2-216ENST00000548939 GJD4Q96KN9 370 aaPredicted RBP9.89□□□□□ -0.83
CNOT2-216ENST00000548939 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
CNOT2-216ENST00000548939 PTGIRP43119 386 aa9.88□□□□□ -0.83
CNOT2-216ENST00000548939 TRIM52Q96A61 297 aa9.88□□□□□ -0.83
CNOT2-216ENST00000548939 SLC35F4A4IF30 521 aa9.87□□□□□ -0.83
CNOT2-216ENST00000548939 FBXO45P0C2W1 286 aa9.87□□□□□ -0.83
CNOT2-216ENST00000548939 GPR161Q8N6U8 529 aaKnown RBP9.87□□□□□ -0.83
CNOT2-216ENST00000548939 RNF217Q8TC41 542 aa9.87□□□□□ -0.83
CNOT2-216ENST00000548939 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
CNOT2-216ENST00000548939 NANOS1Q8WY41 292 aaKnown RBP9.86□□□□□ -0.83
CNOT2-216ENST00000548939 GIGYF1O75420 1035 aaPredicted RBP9.85□□□□□ -0.83
CNOT2-216ENST00000548939 KDF1Q8NAX2 398 aaPredicted RBP9.85□□□□□ -0.83
CNOT2-216ENST00000548939 CNTNAP3BQ96NU0 1288 aa9.85□□□□□ -0.83
CNOT2-216ENST00000548939 CNTNAP3Q9BZ76 1288 aa9.85□□□□□ -0.83
CNOT2-216ENST00000548939 ITGA6P23229 1130 aa9.84□□□□□ -0.83
CNOT2-216ENST00000548939 KRT76Q01546 638 aa9.84□□□□□ -0.83
CNOT2-216ENST00000548939 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
CNOT2-216ENST00000548939 BANK1Q8NDB2 785 aa9.84□□□□□ -0.83
CNOT2-216ENST00000548939 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
CNOT2-216ENST00000548939 CDC14CA4D256 554 aa9.82□□□□□ -0.84
CNOT2-216ENST00000548939 CCDC125Q86Z20 511 aa9.82□□□□□ -0.84
CNOT2-216ENST00000548939 VWA5B2Q8N398 1253 aa9.82□□□□□ -0.84
CNOT2-216ENST00000548939 NR1H3Q13133 447 aa9.81□□□□□ -0.84
CNOT2-216ENST00000548939 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
CNOT2-216ENST00000548939 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
CNOT2-216ENST00000548939 LYSMD3Q7Z3D4 306 aa9.81□□□□□ -0.84
CNOT2-216ENST00000548939 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
CNOT2-216ENST00000548939 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
CNOT2-216ENST00000548939 MCCD1P59942 119 aaPredicted RBP9.8□□□□□ -0.84
CNOT2-216ENST00000548939 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
CNOT2-216ENST00000548939 SOCS7O14512 581 aa9.79□□□□□ -0.84
CNOT2-216ENST00000548939 MTMR14Q8NCE2 650 aa9.79□□□□□ -0.84
CNOT2-216ENST00000548939 ZNF592Q92610 1267 aa9.79□□□□□ -0.84
CNOT2-216ENST00000548939 NDUFB9Q9Y6M9 179 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms