RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 LMO7Q8WWI1 1683 aa9.54□□□□□ -0.88
CALCOCO1-211ENST00000548431 SOX12O15370 315 aa9.53□□□□□ -0.88
CALCOCO1-211ENST00000548431 HSPA1LP34931 641 aa9.53□□□□□ -0.88
CALCOCO1-211ENST00000548431 IP6K1Q92551 441 aa9.53□□□□□ -0.88
CALCOCO1-211ENST00000548431 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
CALCOCO1-211ENST00000548431 NEFMP07197 916 aa9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 HOXC9P31274 260 aa9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 PNISRQ8TF01 805 aaKnown RBP9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 PEAK1Q9H792 1746 aa9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 EMILIN1Q9Y6C2 1016 aa9.52□□□□□ -0.89
CALCOCO1-211ENST00000548431 KIAA0232Q92628 1395 aa9.51□□□□□ -0.89
CALCOCO1-211ENST00000548431 PLEKHG2Q9H7P9 1386 aa9.51□□□□□ -0.89
CALCOCO1-211ENST00000548431 COL18A1P39060 1754 aa9.5□□□□□ -0.89
CALCOCO1-211ENST00000548431 ZC3H6P61129 1189 aaKnown RBP9.5□□□□□ -0.89
CALCOCO1-211ENST00000548431 NGEFQ8N5V2 710 aa9.5□□□□□ -0.89
CALCOCO1-211ENST00000548431 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
CALCOCO1-211ENST00000548431 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
CALCOCO1-211ENST00000548431 FCHSD2O94868 740 aa9.49□□□□□ -0.89
CALCOCO1-211ENST00000548431 IL13P35225 146 aa9.49□□□□□ -0.89
CALCOCO1-211ENST00000548431 HSP90AB2PQ58FF8 381 aa9.49□□□□□ -0.89
CALCOCO1-211ENST00000548431 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 U2SURPO15042 1029 aaKnown RBP9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 U2AF1L5P0DN76 240 aaPredicted RBP9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 U2AF1Q01081 240 aaKnown RBP eCLIP9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 EIF4A2Q14240 407 aaKnown RBP9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 FAM9BQ8IZU0 186 aa9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 ERBB3P21860 1342 aa9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 CAMTA1Q9Y6Y1 1673 aa9.48□□□□□ -0.89
CALCOCO1-211ENST00000548431 RGPD2P0DJD1 1756 aa9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 COL5A2P05997 1499 aaPredicted RBP9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 ANKRD24Q8TF21 1146 aa9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 WDR17Q8IZU2 1322 aa9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 KDRP35968 1356 aa9.47□□□□□ -0.89
CALCOCO1-211ENST00000548431 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 FBLN1P23142 703 aa9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 EVA1CP58658 441 aa9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 CCDC184Q52MB2 194 aa9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 ADAMTS8Q9UP79 889 aa9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 NCAPD2Q15021 1401 aa9.46□□□□□ -0.9
CALCOCO1-211ENST00000548431 NUTM2BA6NNL0 878 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO1-211ENST00000548431 NUTM2EB1AL46 878 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO1-211ENST00000548431 MEX3CQ5U5Q3 659 aaKnown RBP9.45□□□□□ -0.9
CALCOCO1-211ENST00000548431 NUTM2AQ8IVF1 878 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO1-211ENST00000548431 RUNDC1Q96C34 613 aa9.45□□□□□ -0.9
CALCOCO1-211ENST00000548431 CRB1P82279 1406 aa9.45□□□□□ -0.9
CALCOCO1-211ENST00000548431 FAM83GA6ND36 823 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 ADAMTS2O95450 1211 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 CHRNA2Q15822 529 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 SULT6B1Q6IMI4 303 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 LTV1Q96GA3 475 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 SLIT2O94813 1529 aa9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 PARP4Q9UKK3 1724 aaKnown RBP9.44□□□□□ -0.9
CALCOCO1-211ENST00000548431 BRWD3Q6RI45 1802 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 SHANK3Q9BYB0 1731 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 GLI3P10071 1580 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 EYA1Q99502 592 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
CALCOCO1-211ENST00000548431 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 PRKAR2BP31323 418 aa9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 THRAP3Q9Y2W1 955 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-211ENST00000548431 HMOX1P09601 288 aa9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 CALD1Q05682 793 aaKnown RBP9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
CALCOCO1-211ENST00000548431 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 CCDC27Q2M243 656 aa9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 PLEKHO1Q53GL0 409 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 PLEKHF1Q96S99 279 aa9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
CALCOCO1-211ENST00000548431 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.91
CALCOCO1-211ENST00000548431 IL2RBP14784 551 aa9.39□□□□□ -0.91
CALCOCO1-211ENST00000548431 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
CALCOCO1-211ENST00000548431 VPS72Q15906 364 aa9.39□□□□□ -0.91
CALCOCO1-211ENST00000548431 ZNF772Q68DY9 489 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO1-211ENST00000548431 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms