RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 ERFEQ4G0M1 354 aa8.79□□□□□ -1
RPAP3-206ENST00000548296 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
RPAP3-206ENST00000548296 LRRN4Q8WUT4 740 aa8.79□□□□□ -1
RPAP3-206ENST00000548296 CARD14Q9BXL6 1004 aa8.79□□□□□ -1
RPAP3-206ENST00000548296 MAN1A2O60476 641 aa8.78□□□□□ -1
RPAP3-206ENST00000548296 BMP2P12643 396 aa8.78□□□□□ -1
RPAP3-206ENST00000548296 PTK2Q05397 1052 aa8.78□□□□□ -1
RPAP3-206ENST00000548296 ZBTB33Q86T24 672 aa8.78□□□□□ -1
RPAP3-206ENST00000548296 MEIOBQ8N635 442 aa8.78□□□□□ -1
RPAP3-206ENST00000548296 TSEN34Q9BSV6 310 aaKnown RBP8.78□□□□□ -1
RPAP3-206ENST00000548296 GPSM3Q9Y4H4 160 aa8.78□□□□□ -1
RPAP3-206ENST00000548296 AP1G2O75843 785 aa8.77□□□□□ -1.01
RPAP3-206ENST00000548296 C6orf118Q5T5N4 469 aa8.77□□□□□ -1.01
RPAP3-206ENST00000548296 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
RPAP3-206ENST00000548296 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
RPAP3-206ENST00000548296 SLC10A4Q96EP9 437 aa8.77□□□□□ -1.01
RPAP3-206ENST00000548296 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
RPAP3-206ENST00000548296 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
RPAP3-206ENST00000548296 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
RPAP3-206ENST00000548296 NR6A1Q15406 480 aa8.76□□□□□ -1.01
RPAP3-206ENST00000548296 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
RPAP3-206ENST00000548296 TIMELESSQ9UNS1 1208 aa8.75□□□□□ -1.01
RPAP3-206ENST00000548296 GMPRP36959 345 aa8.74□□□□□ -1.01
RPAP3-206ENST00000548296 VEGFBP49765 207 aa8.74□□□□□ -1.01
RPAP3-206ENST00000548296 KCTD15Q96SI1 283 aaPredicted RBP8.74□□□□□ -1.01
RPAP3-206ENST00000548296 PPP1R26Q5T8A7 1209 aaPredicted RBP8.73□□□□□ -1.01
RPAP3-206ENST00000548296 FBXO31Q5XUX0 539 aaPredicted RBP8.72□□□□□ -1.01
RPAP3-206ENST00000548296 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
RPAP3-206ENST00000548296 SOS2Q07890 1332 aaPredicted RBP8.72□□□□□ -1.01
RPAP3-206ENST00000548296 SOBPA7XYQ1 873 aa8.71□□□□□ -1.02
RPAP3-206ENST00000548296 NBPF20Q3BBV1 942 aa8.71□□□□□ -1.02
RPAP3-206ENST00000548296 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
RPAP3-206ENST00000548296 Q6ZVU0 165 aa8.71□□□□□ -1.02
RPAP3-206ENST00000548296 PCMTD1Q96MG8 357 aaPredicted RBP8.71□□□□□ -1.02
RPAP3-206ENST00000548296 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
RPAP3-206ENST00000548296 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
RPAP3-206ENST00000548296 RFC5P40937 340 aa8.7□□□□□ -1.02
RPAP3-206ENST00000548296 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
RPAP3-206ENST00000548296 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
RPAP3-206ENST00000548296 ADAM32Q8TC27 787 aa8.7□□□□□ -1.02
RPAP3-206ENST00000548296 TTLL8A6PVC2 850 aa8.69□□□□□ -1.02
RPAP3-206ENST00000548296 ERBB4Q15303 1308 aa8.69□□□□□ -1.02
RPAP3-206ENST00000548296 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
RPAP3-206ENST00000548296 INTS6LQ5JSJ4 861 aaKnown RBP8.67□□□□□ -1.02
RPAP3-206ENST00000548296 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
RPAP3-206ENST00000548296 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
RPAP3-206ENST00000548296 DNMT3LQ9UJW3 386 aa8.67□□□□□ -1.02
RPAP3-206ENST00000548296 SPINT1O43278 529 aa8.66□□□□□ -1.02
RPAP3-206ENST00000548296 CBLBQ13191 982 aa8.66□□□□□ -1.02
RPAP3-206ENST00000548296 EPS8L1Q8TE68 723 aa8.66□□□□□ -1.02
RPAP3-206ENST00000548296 HMX1Q9NP08 348 aaPredicted RBP8.65□□□□□ -1.02
RPAP3-206ENST00000548296 IL27Q8NEV9 243 aa8.64□□□□□ -1.03
RPAP3-206ENST00000548296 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
RPAP3-206ENST00000548296 SEPT12Q8IYM1 358 aa8.63□□□□□ -1.03
RPAP3-206ENST00000548296 FIGNL2A6NMB9 653 aa8.61□□□□□ -1.03
RPAP3-206ENST00000548296 PTSQ03393 145 aa8.61□□□□□ -1.03
RPAP3-206ENST00000548296 TRIM34Q9BYJ4 488 aa8.61□□□□□ -1.03
RPAP3-206ENST00000548296 ESPNB1AK53 854 aa8.6□□□□□ -1.03
RPAP3-206ENST00000548296 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
RPAP3-206ENST00000548296 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
RPAP3-206ENST00000548296 RELBQ01201 579 aa8.6□□□□□ -1.03
RPAP3-206ENST00000548296 C14orf37Q86TY3 774 aa8.6□□□□□ -1.03
RPAP3-206ENST00000548296 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
RPAP3-206ENST00000548296 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
RPAP3-206ENST00000548296 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
RPAP3-206ENST00000548296 RAB15P59190 212 aa8.59□□□□□ -1.03
RPAP3-206ENST00000548296 ZNF784Q8NCA9 323 aaPredicted RBP8.59□□□□□ -1.03
RPAP3-206ENST00000548296 AGBL1Q96MI9 1066 aa8.59□□□□□ -1.03
RPAP3-206ENST00000548296 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
RPAP3-206ENST00000548296 ADH1AP07327 375 aa8.58□□□□□ -1.04
RPAP3-206ENST00000548296 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
RPAP3-206ENST00000548296 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
RPAP3-206ENST00000548296 NANOS1Q8WY41 292 aaKnown RBP8.58□□□□□ -1.04
RPAP3-206ENST00000548296 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
RPAP3-206ENST00000548296 POLMQ9NP87 494 aaPredicted RBP8.58□□□□□ -1.04
RPAP3-206ENST00000548296 CTSOP43234 321 aaPredicted RBP8.57□□□□□ -1.04
RPAP3-206ENST00000548296 RNF20Q5VTR2 975 aa8.57□□□□□ -1.04
RPAP3-206ENST00000548296 SLC35F4A4IF30 521 aa8.56□□□□□ -1.04
RPAP3-206ENST00000548296 APBB1O00213 710 aa8.56□□□□□ -1.04
RPAP3-206ENST00000548296 SOCS7O14512 581 aa8.56□□□□□ -1.04
RPAP3-206ENST00000548296 LILRA1O75019 489 aa8.56□□□□□ -1.04
RPAP3-206ENST00000548296 PTGIRP43119 386 aa8.56□□□□□ -1.04
RPAP3-206ENST00000548296 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
RPAP3-206ENST00000548296 ZNF330Q9Y3S2 320 aaPredicted RBP8.56□□□□□ -1.04
RPAP3-206ENST00000548296 GJD4Q96KN9 370 aaPredicted RBP8.55□□□□□ -1.04
RPAP3-206ENST00000548296 PCDHB9Q9Y5E1 797 aa8.55□□□□□ -1.04
RPAP3-206ENST00000548296 ADD1P35611 737 aaKnown RBP8.54□□□□□ -1.04
RPAP3-206ENST00000548296 RNF217Q8TC41 542 aa8.54□□□□□ -1.04
RPAP3-206ENST00000548296 ITGA6P23229 1130 aa8.53□□□□□ -1.04
RPAP3-206ENST00000548296 GIGYF1O75420 1035 aaPredicted RBP8.52□□□□□ -1.05
RPAP3-206ENST00000548296 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
RPAP3-206ENST00000548296 SV2AQ7L0J3 742 aa8.52□□□□□ -1.05
RPAP3-206ENST00000548296 LYSMD3Q7Z3D4 306 aa8.52□□□□□ -1.05
RPAP3-206ENST00000548296 GPR161Q8N6U8 529 aaKnown RBP8.52□□□□□ -1.05
RPAP3-206ENST00000548296 CYLDQ9NQC7 956 aa8.52□□□□□ -1.05
RPAP3-206ENST00000548296 ATP5J2-PTCD1G3V325 749 aa8.51□□□□□ -1.05
RPAP3-206ENST00000548296 RNF144AP50876 292 aaPredicted RBP8.51□□□□□ -1.05
RPAP3-206ENST00000548296 NR1H3Q13133 447 aa8.51□□□□□ -1.05
RPAP3-206ENST00000548296 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
RPAP3-206ENST00000548296 VWA5B2Q8N398 1253 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 467.7 ms