RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
KRT4-201ENST00000548097 MRS2Q9HD23 443 aa23.08■■□□□ 1.29
KRT4-201ENST00000548097 FLT4P35916 1363 aa23.07■■□□□ 1.28
KRT4-201ENST00000548097 IP6K1Q92551 441 aa23.07■■□□□ 1.28
KRT4-201ENST00000548097 COL18A1P39060 1754 aa23.06■■□□□ 1.28
KRT4-201ENST00000548097 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
KRT4-201ENST00000548097 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
KRT4-201ENST00000548097 ILDR1Q86SU0 546 aaPredicted RBP23.04■■□□□ 1.28
KRT4-201ENST00000548097 COL3A1P02461 1466 aaPredicted RBP23.04■■□□□ 1.28
KRT4-201ENST00000548097 CFAP53Q96M91 514 aa23.03■■□□□ 1.28
KRT4-201ENST00000548097 CAMTA1Q9Y6Y1 1673 aa23.03■■□□□ 1.28
KRT4-201ENST00000548097 EIF4A2Q14240 407 aaKnown RBP23.03■■□□□ 1.28
KRT4-201ENST00000548097 BTG4Q9NY30 223 aa23.03■■□□□ 1.28
KRT4-201ENST00000548097 RTL1A6NKG5 1358 aa23.02■■□□□ 1.28
KRT4-201ENST00000548097 LMO7Q8WWI1 1683 aa23.02■■□□□ 1.28
KRT4-201ENST00000548097 MEX3CQ5U5Q3 659 aaKnown RBP23.02■■□□□ 1.28
KRT4-201ENST00000548097 CCER2I3L3R5 266 aa23.01■■□□□ 1.27
KRT4-201ENST00000548097 INSRP06213 1382 aa23.01■■□□□ 1.27
KRT4-201ENST00000548097 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
KRT4-201ENST00000548097 ANKRD24Q8TF21 1146 aa23.01■■□□□ 1.27
KRT4-201ENST00000548097 STRN4Q9NRL3 753 aa23.01■■□□□ 1.27
KRT4-201ENST00000548097 COL14A1Q05707 1796 aaKnown RBP23■■□□□ 1.27
KRT4-201ENST00000548097 KIF24Q5T7B8 1368 aa23■■□□□ 1.27
KRT4-201ENST00000548097 PLCH1Q4KWH8 1693 aa22.99■■□□□ 1.27
KRT4-201ENST00000548097 IL13P35225 146 aa22.99■■□□□ 1.27
KRT4-201ENST00000548097 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
KRT4-201ENST00000548097 U2SURPO15042 1029 aaKnown RBP22.98■■□□□ 1.27
KRT4-201ENST00000548097 BLMP54132 1417 aaPredicted RBP22.98■■□□□ 1.27
KRT4-201ENST00000548097 RGPD2P0DJD1 1756 aa22.97■■□□□ 1.27
KRT4-201ENST00000548097 ERBB3P21860 1342 aa22.97■■□□□ 1.27
KRT4-201ENST00000548097 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
KRT4-201ENST00000548097 CSB-PGBD3P0DP91 1061 aa22.96■■□□□ 1.27
KRT4-201ENST00000548097 FAM9BQ8IZU0 186 aa22.96■■□□□ 1.27
KRT4-201ENST00000548097 USHBP1Q8N6Y0 703 aa22.96■■□□□ 1.27
KRT4-201ENST00000548097 EVA1CP58658 441 aa22.96■■□□□ 1.27
KRT4-201ENST00000548097 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
KRT4-201ENST00000548097 NBPF6Q5VWK0 638 aa22.94■■□□□ 1.26
KRT4-201ENST00000548097 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
KRT4-201ENST00000548097 NBPF4Q96M43 638 aa22.94■■□□□ 1.26
KRT4-201ENST00000548097 EYA1Q99502 592 aa22.94■■□□□ 1.26
KRT4-201ENST00000548097 HMOX1P09601 288 aa22.94■■□□□ 1.26
KRT4-201ENST00000548097 SLIT2O94813 1529 aa22.93■■□□□ 1.26
KRT4-201ENST00000548097 ABCC6O95255 1503 aa22.93■■□□□ 1.26
KRT4-201ENST00000548097 U2AF1L5P0DN76 240 aaPredicted RBP22.93■■□□□ 1.26
KRT4-201ENST00000548097 U2AF1Q01081 240 aaKnown RBP eCLIP22.93■■□□□ 1.26
KRT4-201ENST00000548097 NLRP2Q9NX02 1062 aa22.92■■□□□ 1.26
KRT4-201ENST00000548097 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
KRT4-201ENST00000548097 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
KRT4-201ENST00000548097 AEBP1Q8IUX7 1158 aa22.92■■□□□ 1.26
KRT4-201ENST00000548097 USP35Q9P2H5 1018 aa22.92■■□□□ 1.26
KRT4-201ENST00000548097 AFF2P51816 1311 aa22.91■■□□□ 1.26
KRT4-201ENST00000548097 SENP3-EIF4A1A0A087X0R7 540 aa22.91■■□□□ 1.26
KRT4-201ENST00000548097 TOM1L2Q6ZVM7 507 aa22.91■■□□□ 1.26
KRT4-201ENST00000548097 NUDCQ9Y266 331 aa22.91■■□□□ 1.26
KRT4-201ENST00000548097 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
KRT4-201ENST00000548097 WDR17Q8IZU2 1322 aa22.9■■□□□ 1.26
KRT4-201ENST00000548097 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
KRT4-201ENST00000548097 BCL9LQ86UU0 1499 aa22.9■■□□□ 1.26
KRT4-201ENST00000548097 USP21Q9UK80 565 aa22.89■■□□□ 1.26
KRT4-201ENST00000548097 RGPD1P0DJD0 1748 aa22.89■■□□□ 1.26
KRT4-201ENST00000548097 SULT6B1Q6IMI4 303 aa22.89■■□□□ 1.25
KRT4-201ENST00000548097 NWD2Q9ULI1 1742 aa22.88■■□□□ 1.25
KRT4-201ENST00000548097 IGSF1Q8N6C5 1336 aa22.88■■□□□ 1.25
KRT4-201ENST00000548097 UNC5CLQ8IV45 518 aa22.87■■□□□ 1.25
KRT4-201ENST00000548097 CCDC146Q8IYE0 955 aa22.87■■□□□ 1.25
KRT4-201ENST00000548097 CCDC9Q9Y3X0 531 aaKnown RBP22.86■■□□□ 1.25
KRT4-201ENST00000548097 CRB1P82279 1406 aa22.84■■□□□ 1.25
KRT4-201ENST00000548097 FAM208AQ9UK61 1670 aaKnown RBP22.82■■□□□ 1.24
KRT4-201ENST00000548097 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
KRT4-201ENST00000548097 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
KRT4-201ENST00000548097 CARD10Q9BWT7 1032 aa22.81■■□□□ 1.24
KRT4-201ENST00000548097 SPATA31A1Q5TZJ5 1347 aa22.8■■□□□ 1.24
KRT4-201ENST00000548097 KDRP35968 1356 aa22.79■■□□□ 1.24
KRT4-201ENST00000548097 SPATA31A5Q5VU36 1347 aa22.79■■□□□ 1.24
KRT4-201ENST00000548097 SPATA31A7Q8IWB4 1347 aa22.79■■□□□ 1.24
KRT4-201ENST00000548097 VPS72Q15906 364 aa22.79■■□□□ 1.24
KRT4-201ENST00000548097 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
KRT4-201ENST00000548097 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
KRT4-201ENST00000548097 FCHSD2O94868 740 aa22.78■■□□□ 1.24
KRT4-201ENST00000548097 PLEKHF1Q96S99 279 aa22.78■■□□□ 1.24
KRT4-201ENST00000548097 NCAPD2Q15021 1401 aa22.78■■□□□ 1.24
KRT4-201ENST00000548097 MEGF6O75095 1541 aa22.77■■□□□ 1.24
KRT4-201ENST00000548097 QTRT2Q9H974 415 aaKnown RBP22.77■■□□□ 1.24
KRT4-201ENST00000548097 RGS17Q9UGC6 210 aaPredicted RBP22.76■■□□□ 1.23
KRT4-201ENST00000548097 TCP11L2Q8N4U5 519 aa22.75■■□□□ 1.23
KRT4-201ENST00000548097 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
KRT4-201ENST00000548097 TRPC5Q9UL62 973 aaPredicted RBP22.75■■□□□ 1.23
KRT4-201ENST00000548097 ATRNO75882 1429 aa22.75■■□□□ 1.23
KRT4-201ENST00000548097 FAM98CQ17RN3 349 aaKnown RBP22.74■■□□□ 1.23
KRT4-201ENST00000548097 RUNDC1Q96C34 613 aa22.73■■□□□ 1.23
KRT4-201ENST00000548097 GJD4Q96KN9 370 aaPredicted RBP22.73■■□□□ 1.23
KRT4-201ENST00000548097 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
KRT4-201ENST00000548097 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
KRT4-201ENST00000548097 RRP7AQ9Y3A4 280 aaKnown RBP22.73■■□□□ 1.23
KRT4-201ENST00000548097 SALL2Q9Y467 1007 aaPredicted RBP22.73■■□□□ 1.23
KRT4-201ENST00000548097 GLI3P10071 1580 aa22.73■■□□□ 1.23
KRT4-201ENST00000548097 IL2RBP14784 551 aa22.73■■□□□ 1.23
KRT4-201ENST00000548097 APAF1O14727 1248 aa22.72■■□□□ 1.23
KRT4-201ENST00000548097 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
KRT4-201ENST00000548097 NEUROD2Q15784 382 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms