RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
CDK4-205ENST00000547853 PLSCR1O15162 318 aa13.75□□□□□ -0.21
CDK4-205ENST00000547853 FHDC1Q9C0D6 1143 aaPredicted RBP13.75□□□□□ -0.21
CDK4-205ENST00000547853 THRAP3Q9Y2W1 955 aaKnown RBP13.75□□□□□ -0.21
CDK4-205ENST00000547853 TUBGCP6Q96RT7 1819 aa13.75□□□□□ -0.21
CDK4-205ENST00000547853 RGPD5Q99666 1765 aa13.75□□□□□ -0.21
CDK4-205ENST00000547853 SLIT3O75094 1523 aa13.74□□□□□ -0.21
CDK4-205ENST00000547853 PTF1AQ7RTS3 328 aa13.74□□□□□ -0.21
CDK4-205ENST00000547853 SGIP1Q9BQI5 828 aa13.74□□□□□ -0.21
CDK4-205ENST00000547853 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
CDK4-205ENST00000547853 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
CDK4-205ENST00000547853 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
CDK4-205ENST00000547853 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
CDK4-205ENST00000547853 SYT17Q9BSW7 474 aa13.73□□□□□ -0.21
CDK4-205ENST00000547853 QRICH2Q9H0J4 1663 aa13.72□□□□□ -0.21
CDK4-205ENST00000547853 BTAF1O14981 1849 aa13.72□□□□□ -0.21
CDK4-205ENST00000547853 EVA1CP58658 441 aa13.72□□□□□ -0.21
CDK4-205ENST00000547853 PROM2Q8N271 834 aa13.72□□□□□ -0.21
CDK4-205ENST00000547853 MPHOSPH9Q99550 1183 aa13.72□□□□□ -0.21
CDK4-205ENST00000547853 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
CDK4-205ENST00000547853 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
CDK4-205ENST00000547853 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
CDK4-205ENST00000547853 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
CDK4-205ENST00000547853 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
CDK4-205ENST00000547853 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
CDK4-205ENST00000547853 ABCC6O95255 1503 aa13.69□□□□□ -0.22
CDK4-205ENST00000547853 GIGYF1O75420 1035 aaPredicted RBP13.68□□□□□ -0.22
CDK4-205ENST00000547853 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
CDK4-205ENST00000547853 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
CDK4-205ENST00000547853 ACEP12821 1306 aa13.67□□□□□ -0.22
CDK4-205ENST00000547853 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
CDK4-205ENST00000547853 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
CDK4-205ENST00000547853 DDB1Q16531 1140 aa13.66□□□□□ -0.22
CDK4-205ENST00000547853 STK32BQ9NY57 414 aa13.66□□□□□ -0.22
CDK4-205ENST00000547853 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
CDK4-205ENST00000547853 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
CDK4-205ENST00000547853 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
CDK4-205ENST00000547853 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
CDK4-205ENST00000547853 GCP02774 474 aa13.63□□□□□ -0.23
CDK4-205ENST00000547853 ARXQ96QS3 562 aa13.63□□□□□ -0.23
CDK4-205ENST00000547853 PPIP5K1Q6PFW1 1433 aa13.63□□□□□ -0.23
CDK4-205ENST00000547853 PLEKHG3A1L390 1219 aa13.62□□□□□ -0.23
CDK4-205ENST00000547853 NFAT5O94916 1531 aa13.62□□□□□ -0.23
CDK4-205ENST00000547853 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
CDK4-205ENST00000547853 USP6P35125 1406 aa13.61□□□□□ -0.23
CDK4-205ENST00000547853 USP54Q70EL1 1684 aa13.6□□□□□ -0.23
CDK4-205ENST00000547853 LY75O60449 1722 aa13.6□□□□□ -0.23
CDK4-205ENST00000547853 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
CDK4-205ENST00000547853 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
CDK4-205ENST00000547853 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
CDK4-205ENST00000547853 LTN1O94822 1766 aa13.59□□□□□ -0.23
CDK4-205ENST00000547853 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
CDK4-205ENST00000547853 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
CDK4-205ENST00000547853 ZNF827Q17R98 1081 aa13.58□□□□□ -0.24
CDK4-205ENST00000547853 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
CDK4-205ENST00000547853 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.24
CDK4-205ENST00000547853 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
CDK4-205ENST00000547853 ATP10DQ9P241 1426 aa13.57□□□□□ -0.24
CDK4-205ENST00000547853 DOT1LQ8TEK3 1739 aa13.57□□□□□ -0.24
CDK4-205ENST00000547853 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
CDK4-205ENST00000547853 GPR162Q16538 588 aa13.57□□□□□ -0.24
CDK4-205ENST00000547853 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
CDK4-205ENST00000547853 ZBTB7CA1YPR0 619 aa13.56□□□□□ -0.24
CDK4-205ENST00000547853 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
CDK4-205ENST00000547853 ADCY9O60503 1353 aa13.55□□□□□ -0.24
CDK4-205ENST00000547853 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
CDK4-205ENST00000547853 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
CDK4-205ENST00000547853 CARD10Q9BWT7 1032 aa13.53□□□□□ -0.24
CDK4-205ENST00000547853 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
CDK4-205ENST00000547853 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDK4-205ENST00000547853 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
CDK4-205ENST00000547853 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
CDK4-205ENST00000547853 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
CDK4-205ENST00000547853 NLRP6P59044 892 aa13.51□□□□□ -0.25
CDK4-205ENST00000547853 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
CDK4-205ENST00000547853 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
CDK4-205ENST00000547853 C5P01031 1676 aa13.5□□□□□ -0.25
CDK4-205ENST00000547853 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
CDK4-205ENST00000547853 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
CDK4-205ENST00000547853 HSPA6P17066 643 aa13.49□□□□□ -0.25
CDK4-205ENST00000547853 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
CDK4-205ENST00000547853 TAF1LQ8IZX4 1826 aa13.48□□□□□ -0.25
CDK4-205ENST00000547853 POLD1P28340 1107 aa13.48□□□□□ -0.25
CDK4-205ENST00000547853 SLC16A10Q8TF71 515 aa13.48□□□□□ -0.25
CDK4-205ENST00000547853 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
CDK4-205ENST00000547853 CICQ96RK0 1608 aaPredicted RBP13.48□□□□□ -0.25
CDK4-205ENST00000547853 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
CDK4-205ENST00000547853 EXOC5O00471 708 aa13.47□□□□□ -0.25
CDK4-205ENST00000547853 SRPK2P78362 688 aaKnown RBP13.47□□□□□ -0.25
CDK4-205ENST00000547853 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
CDK4-205ENST00000547853 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
CDK4-205ENST00000547853 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
CDK4-205ENST00000547853 ANP32CO43423 234 aa13.46□□□□□ -0.25
CDK4-205ENST00000547853 CSB-PGBD3P0DP91 1061 aa13.46□□□□□ -0.25
CDK4-205ENST00000547853 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
CDK4-205ENST00000547853 NEFLP07196 543 aa13.45□□□□□ -0.26
CDK4-205ENST00000547853 NSD2O96028 1365 aa13.45□□□□□ -0.26
CDK4-205ENST00000547853 ERBB3P21860 1342 aa13.44□□□□□ -0.26
CDK4-205ENST00000547853 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
CDK4-205ENST00000547853 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms