RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 MBD3O95983 291 aa14.43□□□□□ -0.1
RBFOX1-208ENST00000547372 MLECQ14165 292 aa14.43□□□□□ -0.1
RBFOX1-208ENST00000547372 PTPRGP23470 1445 aa14.43□□□□□ -0.1
RBFOX1-208ENST00000547372 ST18O60284 1047 aa14.43□□□□□ -0.1
RBFOX1-208ENST00000547372 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
RBFOX1-208ENST00000547372 EXOSC9Q06265 439 aaKnown RBP14.43□□□□□ -0.1
RBFOX1-208ENST00000547372 CTNNA3Q9UI47 895 aa14.42□□□□□ -0.1
RBFOX1-208ENST00000547372 CHMP3Q9Y3E7 222 aa14.42□□□□□ -0.1
RBFOX1-208ENST00000547372 KRT222Q8N1A0 295 aa14.42□□□□□ -0.1
RBFOX1-208ENST00000547372 TRAK1Q9UPV9 953 aa14.42□□□□□ -0.1
RBFOX1-208ENST00000547372 SMARCA5O60264 1052 aaPredicted RBP14.42□□□□□ -0.1
RBFOX1-208ENST00000547372 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
RBFOX1-208ENST00000547372 RABEP1Q15276 862 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 ANKRD7Q92527 254 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 TOMM22Q9NS69 142 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 ZDHHC9Q9Y397 364 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 CROCC2H7BZ55 1655 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 MTHFSP49914 203 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 ATF7IPQ6VMQ6 1270 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 RSPH14Q9UHP6 348 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 LAMC1P11047 1609 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 ITSN2Q9NZM3 1697 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 CCDC112Q8NEF3 446 aa14.41□□□□□ -0.1
RBFOX1-208ENST00000547372 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
RBFOX1-208ENST00000547372 PHF14O94880 888 aa14.4□□□□□ -0.1
RBFOX1-208ENST00000547372 HNRNPH2P55795 449 aaKnown RBP14.4□□□□□ -0.1
RBFOX1-208ENST00000547372 CYP2E1P05181 493 aaPredicted RBP14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 TNNT1P13805 278 aa14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 SSH1Q8WYL5 1049 aa14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 DDX41Q9UJV9 622 aaKnown RBP14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 NUP160Q12769 1436 aa14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 CWC22Q9HCG8 908 aaKnown RBP14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 EIF2AK4Q9P2K8 1649 aaKnown RBP14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 CCDC141Q6ZP82 1450 aa14.39□□□□□ -0.11
RBFOX1-208ENST00000547372 LOC102724159A0A0B4J2E5 919 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 NEK4P51957 841 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 PWP2Q15269 919 aaKnown RBP14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 SYNMO15061 1565 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 CDC45O75419 566 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 C10orf67Q8IYJ2 551 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 GPATCH11Q8N954 259 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 CARD14Q9BXL6 1004 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 PLA2R1Q13018 1463 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 POLR3AO14802 1390 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 DTNBO60941 627 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 TPD52L1Q16890 204 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
RBFOX1-208ENST00000547372 PTGS1P23219 599 aa14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 ARHGAP31Q2M1Z3 1444 aa14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 GIMAP6Q6P9H5 292 aa14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 KIF18AQ8NI77 898 aa14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 NUTM2DQ5VT03 806 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 HDAC5Q9UQL6 1122 aa14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 ADCY10Q96PN6 1610 aa14.37□□□□□ -0.11
RBFOX1-208ENST00000547372 LRMPQ12912 555 aa14.36□□□□□ -0.11
RBFOX1-208ENST00000547372 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-208ENST00000547372 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-208ENST00000547372 USP48Q86UV5 1035 aa14.36□□□□□ -0.11
RBFOX1-208ENST00000547372 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
RBFOX1-208ENST00000547372 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 GOLGA6L6A8MZA4 724 aa14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 KDM4AO75164 1064 aa14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 FEZ2Q9UHY8 353 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 GTF2A1P52655 376 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 KCNF1Q9H3M0 494 aa14.35□□□□□ -0.11
RBFOX1-208ENST00000547372 RAPGEF6Q8TEU7 1601 aa14.34□□□□□ -0.11
RBFOX1-208ENST00000547372 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
RBFOX1-208ENST00000547372 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
RBFOX1-208ENST00000547372 NEK11Q8NG66 645 aa14.34□□□□□ -0.11
RBFOX1-208ENST00000547372 GYS2P54840 703 aa14.33□□□□□ -0.11
RBFOX1-208ENST00000547372 CCDC186Q7Z3E2 898 aa14.33□□□□□ -0.11
RBFOX1-208ENST00000547372 C16orf71Q8IYS4 520 aaPredicted RBP14.33□□□□□ -0.11
RBFOX1-208ENST00000547372 STK26Q9P289 416 aa14.33□□□□□ -0.11
RBFOX1-208ENST00000547372 FIBPO43427 364 aa14.33□□□□□ -0.12
RBFOX1-208ENST00000547372 CT47B1P0C2W7 299 aaPredicted RBP14.33□□□□□ -0.12
RBFOX1-208ENST00000547372 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.12
RBFOX1-208ENST00000547372 CTIFO43310 598 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-208ENST00000547372 RAD51AP2Q09MP3 1159 aa14.33□□□□□ -0.12
RBFOX1-208ENST00000547372 MORC2Q9Y6X9 1032 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-208ENST00000547372 KMT5BQ4FZB7 885 aa14.32□□□□□ -0.12
RBFOX1-208ENST00000547372 EP400NLQ6ZTU2 488 aa14.32□□□□□ -0.12
RBFOX1-208ENST00000547372 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
RBFOX1-208ENST00000547372 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 ELF2Q15723 593 aa14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 KANK1Q14678 1352 aa14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 TRMT1Q9NXH9 659 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 TRIM66O15016 1216 aa14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 TMX3Q96JJ7 454 aa14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 LARP6Q9BRS8 491 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-208ENST00000547372 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
RBFOX1-208ENST00000547372 NRBP1Q9UHY1 535 aa14.3□□□□□ -0.12
RBFOX1-208ENST00000547372 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms